BLASTX nr result
ID: Coptis25_contig00005517
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00005517 (391 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513776.1| conserved hypothetical protein [Ricinus comm... 77 2e-12 emb|CBI19055.3| unnamed protein product [Vitis vinifera] 76 2e-12 ref|XP_002285840.1| PREDICTED: selenoprotein K [Vitis vinifera] ... 76 2e-12 ref|XP_002307425.1| predicted protein [Populus trichocarpa] gi|1... 75 5e-12 ref|XP_004140863.1| PREDICTED: selenoprotein K-like [Cucumis sat... 74 9e-12 >ref|XP_002513776.1| conserved hypothetical protein [Ricinus communis] gi|223546862|gb|EEF48359.1| conserved hypothetical protein [Ricinus communis] Length = 100 Score = 76.6 bits (187), Expect = 2e-12 Identities = 40/76 (52%), Positives = 47/76 (61%), Gaps = 3/76 (3%) Frame = -3 Query: 389 SIINFIRIFFGTLFSVDKSDAYKK---SGKKWDXXXXXXXXXXXXXXXXXXXXXXGMDNV 219 +IINFI +FF T+FS++KSDAY+K S KKWD +DNV Sbjct: 27 AIINFIGVFFSTMFSMEKSDAYRKGSGSSKKWDGGPGGPGSGPYGGGPRGPPRG--LDNV 84 Query: 218 RGIDHSSLPACGSCCG 171 RGIDHSSLPACGSCCG Sbjct: 85 RGIDHSSLPACGSCCG 100 >emb|CBI19055.3| unnamed protein product [Vitis vinifera] Length = 111 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 3/76 (3%) Frame = -3 Query: 389 SIINFIRIFFGTLFSVDKSDAYKKS---GKKWDXXXXXXXXXXXXXXXXXXXXXXGMDNV 219 +I+NFI +FF T+FS++KSDAY+KS GKKWD +DNV Sbjct: 36 AIVNFIGVFFVTMFSMEKSDAYRKSSGSGKKWDGGGPGGPGRGPYGGGPRGPPRG-LDNV 94 Query: 218 RGIDHSSLPACGSCCG 171 RGIDHS+LPACGSCCG Sbjct: 95 RGIDHSALPACGSCCG 110 >ref|XP_002285840.1| PREDICTED: selenoprotein K [Vitis vinifera] gi|147801093|emb|CAN71044.1| hypothetical protein VITISV_015657 [Vitis vinifera] Length = 102 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 3/76 (3%) Frame = -3 Query: 389 SIINFIRIFFGTLFSVDKSDAYKKS---GKKWDXXXXXXXXXXXXXXXXXXXXXXGMDNV 219 +I+NFI +FF T+FS++KSDAY+KS GKKWD +DNV Sbjct: 27 AIVNFIGVFFVTMFSMEKSDAYRKSSGSGKKWDGGGPGGPGRGPYGGGPRGPPRG-LDNV 85 Query: 218 RGIDHSSLPACGSCCG 171 RGIDHS+LPACGSCCG Sbjct: 86 RGIDHSALPACGSCCG 101 >ref|XP_002307425.1| predicted protein [Populus trichocarpa] gi|118485451|gb|ABK94582.1| unknown [Populus trichocarpa] gi|222856874|gb|EEE94421.1| predicted protein [Populus trichocarpa] Length = 100 Score = 75.1 bits (183), Expect = 5e-12 Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 3/76 (3%) Frame = -3 Query: 389 SIINFIRIFFGTLFSVDKSDAYKK---SGKKWDXXXXXXXXXXXXXXXXXXXXXXGMDNV 219 +I+NFI +FF T+FS++K+DAY+K S KKWD +DNV Sbjct: 27 AIVNFIGVFFSTMFSMEKTDAYRKGSGSSKKWDGGPGGPGSGPYGGGPRGPPRG--LDNV 84 Query: 218 RGIDHSSLPACGSCCG 171 RGIDHSSLPACGSCCG Sbjct: 85 RGIDHSSLPACGSCCG 100 >ref|XP_004140863.1| PREDICTED: selenoprotein K-like [Cucumis sativus] gi|449522556|ref|XP_004168292.1| PREDICTED: selenoprotein K-like [Cucumis sativus] Length = 101 Score = 74.3 bits (181), Expect = 9e-12 Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 3/76 (3%) Frame = -3 Query: 389 SIINFIRIFFGTLFSVDKSDAYKK---SGKKWDXXXXXXXXXXXXXXXXXXXXXXGMDNV 219 +I+N I +FF TLFS++KS+AY+K SGKKWD +DNV Sbjct: 27 AIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRG-LDNV 85 Query: 218 RGIDHSSLPACGSCCG 171 RGIDHSSLPACGSCCG Sbjct: 86 RGIDHSSLPACGSCCG 101