BLASTX nr result

ID: Coptis25_contig00005515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005515
         (1492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa] ...   137   2e-32
ref|XP_003516534.1| PREDICTED: DNA (cytosine-5)-methyltransferas...   130   2e-32
ref|XP_004149031.1| PREDICTED: DNA (cytosine-5)-methyltransferas...   130   6e-32
ref|XP_004170052.1| PREDICTED: DNA (cytosine-5)-methyltransferas...   130   6e-32
gb|AFK45072.1| unknown [Lotus japonicus]                              132   8e-32

>ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa]
            gi|222846392|gb|EEE83939.1| DNA methyltransferase
            [Populus trichocarpa]
          Length = 973

 Score =  137 bits (346), Expect(2) = 2e-32
 Identities = 62/79 (78%), Positives = 68/79 (86%)
 Frame = +2

Query: 11   RPFRRLWWDVIVPIVVTRAEPHNQIILHPDQDRVLTVRENARLQGFPDFYQLCGPTKERY 190
            +PF RLWWD  VP VVTRAEPHNQ I+HP+QDRVLT+RENARLQGFPD+YQLCGP KERY
Sbjct: 860  KPFARLWWDETVPTVVTRAEPHNQAIMHPEQDRVLTIRENARLQGFPDYYQLCGPIKERY 919

Query: 191  TQVGNAAAIPVARALRICL 247
             QVGNA A+PVARAL   L
Sbjct: 920  IQVGNAVAVPVARALGYAL 938



 Score = 29.6 bits (65), Expect(2) = 2e-32
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 234 LGYALGLAIQGIGDDRPLCTLP 299
           LGYALG A QG   D P+ +LP
Sbjct: 934 LGYALGRAFQGFAGDDPVFSLP 955


>ref|XP_003516534.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
          Length = 834

 Score =  130 bits (327), Expect(2) = 2e-32
 Identities = 60/75 (80%), Positives = 65/75 (86%)
 Frame = +2

Query: 11  RPFRRLWWDVIVPIVVTRAEPHNQIILHPDQDRVLTVRENARLQGFPDFYQLCGPTKERY 190
           +PF RLWWD IVP VVTRAEPHNQ ILHP Q+RVLT+RENARLQGFPD Y+LCGP KERY
Sbjct: 717 KPFGRLWWDEIVPTVVTRAEPHNQAILHPRQNRVLTIRENARLQGFPDCYKLCGPVKERY 776

Query: 191 TQVGNAAAIPVARAL 235
            QVGNA A+PVA AL
Sbjct: 777 IQVGNAVAVPVALAL 791



 Score = 36.6 bits (83), Expect(2) = 2e-32
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = +3

Query: 234 LGYALGLAIQGIGDDRPLCTLP 299
           LGY  GLA QG+ DD+PL TLP
Sbjct: 791 LGYTFGLACQGLSDDKPLTTLP 812


>ref|XP_004149031.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Cucumis
           sativus]
          Length = 855

 Score =  130 bits (326), Expect(2) = 6e-32
 Identities = 58/75 (77%), Positives = 65/75 (86%)
 Frame = +2

Query: 11  RPFRRLWWDVIVPIVVTRAEPHNQIILHPDQDRVLTVRENARLQGFPDFYQLCGPTKERY 190
           +PF RLWWD  VP VVTRAEPHNQ I HP+QDRV+T+RENARLQGFPD+Y+L GP KERY
Sbjct: 741 KPFARLWWDETVPTVVTRAEPHNQAITHPEQDRVMTIRENARLQGFPDYYKLFGPVKERY 800

Query: 191 TQVGNAAAIPVARAL 235
            QVGNA A+PVARAL
Sbjct: 801 IQVGNAVAVPVARAL 815



 Score = 35.4 bits (80), Expect(2) = 6e-32
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 234 LGYALGLAIQGIGDDRPLCTLP 299
           LGY+LG+A QG+  D P+C+LP
Sbjct: 815 LGYSLGMAFQGLAGDTPVCSLP 836


>ref|XP_004170052.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like, partial
           [Cucumis sativus]
          Length = 753

 Score =  130 bits (326), Expect(2) = 6e-32
 Identities = 58/75 (77%), Positives = 65/75 (86%)
 Frame = +2

Query: 11  RPFRRLWWDVIVPIVVTRAEPHNQIILHPDQDRVLTVRENARLQGFPDFYQLCGPTKERY 190
           +PF RLWWD  VP VVTRAEPHNQ I HP+QDRV+T+RENARLQGFPD+Y+L GP KERY
Sbjct: 639 KPFARLWWDETVPTVVTRAEPHNQAITHPEQDRVMTIRENARLQGFPDYYKLFGPVKERY 698

Query: 191 TQVGNAAAIPVARAL 235
            QVGNA A+PVARAL
Sbjct: 699 IQVGNAVAVPVARAL 713



 Score = 35.4 bits (80), Expect(2) = 6e-32
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 234 LGYALGLAIQGIGDDRPLCTLP 299
           LGY+LG+A QG+  D P+C+LP
Sbjct: 713 LGYSLGMAFQGLAGDTPVCSLP 734


>gb|AFK45072.1| unknown [Lotus japonicus]
          Length = 219

 Score =  132 bits (332), Expect(2) = 8e-32
 Identities = 58/75 (77%), Positives = 66/75 (88%)
 Frame = +2

Query: 11  RPFRRLWWDVIVPIVVTRAEPHNQIILHPDQDRVLTVRENARLQGFPDFYQLCGPTKERY 190
           +PF RLWWD  VP VVTRAEPHNQ I+HP+QDRVL++RENARLQGFPD+Y+LCGP K RY
Sbjct: 108 KPFARLWWDETVPTVVTRAEPHNQAIIHPEQDRVLSIRENARLQGFPDYYKLCGPVKARY 167

Query: 191 TQVGNAAAIPVARAL 235
            QVGNA A+PVARAL
Sbjct: 168 IQVGNAVAVPVARAL 182



 Score = 32.7 bits (73), Expect(2) = 8e-32
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +3

Query: 234 LGYALGLAIQGIGDDRPLCTLP 299
           LGY LGLA QG+  D PL  LP
Sbjct: 182 LGYTLGLAFQGVAGDGPLLNLP 203


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