BLASTX nr result

ID: Coptis25_contig00005511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005511
         (1680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521120.1| conserved hypothetical protein [Ricinus comm...   206   2e-79
ref|XP_004139654.1| PREDICTED: uncharacterized protein LOC101208...   197   1e-77
ref|XP_004139655.1| PREDICTED: uncharacterized protein LOC101208...   197   4e-77
ref|XP_002883554.1| hypothetical protein ARALYDRAFT_479993 [Arab...   187   1e-76
ref|XP_002265815.1| PREDICTED: uncharacterized protein LOC100263...   187   2e-75

>ref|XP_002521120.1| conserved hypothetical protein [Ricinus communis]
            gi|223539689|gb|EEF41271.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 386

 Score =  206 bits (523), Expect(2) = 2e-79
 Identities = 102/169 (60%), Positives = 120/169 (71%)
 Frame = +3

Query: 648  GSVKCWEIVEEARRYLDLKQRSCSLESCSFTGNYGELRRHARRVHPTNRPALVDQSRQRN 827
            G+V  WE+VEEAR+YL+LK+RSCS ESCSF GNY ELRRHARRVHPT RP+ VD SR+R 
Sbjct: 184  GAVLGWEVVEEARKYLNLKKRSCSRESCSFCGNYQELRRHARRVHPTTRPSDVDPSRERA 243

Query: 828  WRHLENQQEYGDIVSAIRSAMPGAIVFGDYVIETGDGFSANRDNNSGESSGPLLTSFILY 1007
            WR LE Q+EYGDIVSA+RSAMPGA+V GDYVIE GD FS  R+  +GE + P  T+F L+
Sbjct: 244  WRCLERQREYGDIVSALRSAMPGAVVVGDYVIENGDRFSVEREGGAGEVNAPWWTTFFLF 303

Query: 1008 QMMRPFSPVSEPXXXXXXXXXXXXXXXXLSDRRHLWGENLLGLQDDAAD 1154
            QM+      +EP                L +RR LWGENLLGLQDD  D
Sbjct: 304  QMIGSIDGAAEPRARSRAWTRHRRSGGALPERRFLWGENLLGLQDDDED 352



 Score =  119 bits (297), Expect(2) = 2e-79
 Identities = 75/200 (37%), Positives = 99/200 (49%), Gaps = 14/200 (7%)
 Frame = +1

Query: 19  MTDLKGSTSLGIDDSALHKEWDDALCPICMDHPHNAVLLLCSSFDNGCRPYICDSSYRHS 198
           MT +K S     D   LH E D+  CPICMDHPHNAVLLLCSS + GCR YICD+S RHS
Sbjct: 1   MTGVKRSRYTDSDIRTLHNELDEVSCPICMDHPHNAVLLLCSSHEKGCRSYICDTSSRHS 60

Query: 199 NCLDRFKKYFRSGPSQPDSVFIENPENPRLDTSESIFRASGSR---------NNLMEDXX 351
           NCLDR+KK   S  S           N  LD+S  I   S S            +++   
Sbjct: 61  NCLDRYKKLRDSSGS-----------NTTLDSSLPINSFSSSNISDTSLTLGARVLDSYE 109

Query: 352 XXXXXXXXTASIARTLEVIGDSNREESHRYIDMQDGSILGRDSFEPFRQRIGGE-----H 516
                     +  R  E + +++ +  +R ++ +   +L     E F  RI  E     +
Sbjct: 110 NHNQSDSDNITSVRMPEQLLENSIQHPNRQVETRGEGVLEAGDSESFPDRIELEEADVVN 169

Query: 517 ISGSSLNLKCPLCRGSVKCW 576
            S + L+LKCPLCRG+V  W
Sbjct: 170 SSEAGLSLKCPLCRGAVLGW 189


>ref|XP_004139654.1| PREDICTED: uncharacterized protein LOC101208460 isoform 1 [Cucumis
            sativus]
          Length = 389

 Score =  197 bits (500), Expect(2) = 1e-77
 Identities = 103/182 (56%), Positives = 127/182 (69%), Gaps = 4/182 (2%)
 Frame = +3

Query: 648  GSVKCWEIVEEARRYLDLKQRSCSLESCSFTGNYGELRRHARRVHPTNRPALVDQSRQRN 827
            G+V   E++EEAR YL+LK+RSCS E+CSF+GNY ELRRHARRVHPT+RPA++D SR+R 
Sbjct: 187  GAVLGLEVIEEAREYLNLKKRSCSRETCSFSGNYQELRRHARRVHPTSRPAVIDPSRERA 246

Query: 828  WRHLENQQEYGDIVSAIRSAMPGAIVFGDYVIETGDGFSA-NRDNNSGESSGPLLTSFIL 1004
            WR LE Q+E GD+VSAIRSAMPGA+V GDYVIE GDG  A  RDN +G+ +GPLLTSF L
Sbjct: 247  WRRLERQREVGDVVSAIRSAMPGALVVGDYVIENGDGMVAGERDNGTGDVNGPLLTSFFL 306

Query: 1005 YQMMRPFSPVSE--PXXXXXXXXXXXXXXXXLSDRRHLWGENLLGLQDDA-ADWNLSNQM 1175
            + M        E  P                +S+RR LWGENLLGLQ+D   D+ +   M
Sbjct: 307  FHMFGSVEGAREPRPRSRSWVRHRRSGGGTPVSERRFLWGENLLGLQEDTDEDFRIYIGM 366

Query: 1176 GE 1181
            G+
Sbjct: 367  GD 368



 Score =  121 bits (303), Expect(2) = 1e-77
 Identities = 72/188 (38%), Positives = 94/188 (50%), Gaps = 4/188 (2%)
 Frame = +1

Query: 16  KMTDLKGSTSLGIDDSALHKEWDDALCPICMDHPHNAVLLLCSSFDNGCRPYICDSSYRH 195
           KM  +K       D  ALHKE D+  CPICMDHPHNAVLLLCSS   GC+PYICD+S+RH
Sbjct: 3   KMAGVKRRIHNDSDILALHKELDEVSCPICMDHPHNAVLLLCSSHHKGCKPYICDTSHRH 62

Query: 196 SNCLDRFKKYFRSGPSQPDSVFIENPENPRLDTSESIFRASGSRNNLMEDXXXXXXXXXX 375
           SNC D+FKK  R    +   +    P NP   ++ S      S +    D          
Sbjct: 63  SNCFDQFKK-LREETRKSPRLSSPLPINPYSFSNPSTNNLGLSIDLNEVDDNQNINERNT 121

Query: 376 TASIARTLEVIGDSNREESHRYIDMQDGSILGRDSFEPFRQRIGGEHI----SGSSLNLK 543
            AS       +GD+  E S+R +D  +   +         +R+  E +    S    NLK
Sbjct: 122 VASAGLPGLALGDNGTENSNRTVDTNEAGDMDTAGSGSITERVDQEGLDAGNSSEYSNLK 181

Query: 544 CPLCRGSV 567
           CP+CRG+V
Sbjct: 182 CPMCRGAV 189


>ref|XP_004139655.1| PREDICTED: uncharacterized protein LOC101208460 isoform 2 [Cucumis
            sativus] gi|449443782|ref|XP_004139656.1| PREDICTED:
            uncharacterized protein LOC101208460 isoform 3 [Cucumis
            sativus] gi|449527327|ref|XP_004170663.1| PREDICTED:
            uncharacterized protein LOC101225264 isoform 1 [Cucumis
            sativus] gi|449527329|ref|XP_004170664.1| PREDICTED:
            uncharacterized protein LOC101225264 isoform 2 [Cucumis
            sativus]
          Length = 386

 Score =  197 bits (500), Expect(2) = 4e-77
 Identities = 103/182 (56%), Positives = 127/182 (69%), Gaps = 4/182 (2%)
 Frame = +3

Query: 648  GSVKCWEIVEEARRYLDLKQRSCSLESCSFTGNYGELRRHARRVHPTNRPALVDQSRQRN 827
            G+V   E++EEAR YL+LK+RSCS E+CSF+GNY ELRRHARRVHPT+RPA++D SR+R 
Sbjct: 184  GAVLGLEVIEEAREYLNLKKRSCSRETCSFSGNYQELRRHARRVHPTSRPAVIDPSRERA 243

Query: 828  WRHLENQQEYGDIVSAIRSAMPGAIVFGDYVIETGDGFSA-NRDNNSGESSGPLLTSFIL 1004
            WR LE Q+E GD+VSAIRSAMPGA+V GDYVIE GDG  A  RDN +G+ +GPLLTSF L
Sbjct: 244  WRRLERQREVGDVVSAIRSAMPGALVVGDYVIENGDGMVAGERDNGTGDVNGPLLTSFFL 303

Query: 1005 YQMMRPFSPVSE--PXXXXXXXXXXXXXXXXLSDRRHLWGENLLGLQDDA-ADWNLSNQM 1175
            + M        E  P                +S+RR LWGENLLGLQ+D   D+ +   M
Sbjct: 304  FHMFGSVEGAREPRPRSRSWVRHRRSGGGTPVSERRFLWGENLLGLQEDTDEDFRIYIGM 363

Query: 1176 GE 1181
            G+
Sbjct: 364  GD 365



 Score =  119 bits (299), Expect(2) = 4e-77
 Identities = 69/175 (39%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
 Frame = +1

Query: 55  DDSALHKEWDDALCPICMDHPHNAVLLLCSSFDNGCRPYICDSSYRHSNCLDRFKKYFRS 234
           D  ALHKE D+  CPICMDHPHNAVLLLCSS   GC+PYICD+S+RHSNC D+FKK  R 
Sbjct: 13  DILALHKELDEVSCPICMDHPHNAVLLLCSSHHKGCKPYICDTSHRHSNCFDQFKK-LRE 71

Query: 235 GPSQPDSVFIENPENPRLDTSESIFRASGSRNNLMEDXXXXXXXXXXTASIARTLEVIGD 414
              +   +    P NP   ++ S      S +    D           AS       +GD
Sbjct: 72  ETRKSPRLSSPLPINPYSFSNPSTNNLGLSIDLNEVDDNQNINERNTVASAGLPGLALGD 131

Query: 415 SNREESHRYIDMQDGSILGRDSFEPFRQRIGGEHI----SGSSLNLKCPLCRGSV 567
           +  E S+R +D  +   +         +R+  E +    S    NLKCP+CRG+V
Sbjct: 132 NGTENSNRTVDTNEAGDMDTAGSGSITERVDQEGLDAGNSSEYSNLKCPMCRGAV 186


>ref|XP_002883554.1| hypothetical protein ARALYDRAFT_479993 [Arabidopsis lyrata subsp.
            lyrata] gi|297329394|gb|EFH59813.1| hypothetical protein
            ARALYDRAFT_479993 [Arabidopsis lyrata subsp. lyrata]
          Length = 354

 Score =  187 bits (475), Expect(2) = 1e-76
 Identities = 98/172 (56%), Positives = 116/172 (67%), Gaps = 6/172 (3%)
 Frame = +3

Query: 648  GSVKCWEIVEEARRYLDLKQRSCSLESCSFTGNYGELRRHARRVHPTNRPALVDQSRQRN 827
            G+V  W++VEE R YLDLK RSCS ESCSFTGNY +LRRHARR HPT RP+  D SR+R 
Sbjct: 145  GTVLGWKVVEEVRTYLDLKNRSCSRESCSFTGNYQDLRRHARRTHPTTRPSDTDPSRERA 204

Query: 828  WRHLENQQEYGDIVSAIRSAMPGAIVFGDYVIETGDGFSANRDNNSGESSGPLLTSFILY 1007
            WRHLENQ+EYGDIVSAIRSAMPGA+V GDYVIE GD FS  R+  +G S   L T+ +L+
Sbjct: 205  WRHLENQREYGDIVSAIRSAMPGAVVVGDYVIENGDRFSGERETGNGGSD--LWTTLVLF 262

Query: 1008 QMMRPF------SPVSEPXXXXXXXXXXXXXXXXLSDRRHLWGENLLGLQDD 1145
            QM+         +  S                   SDRR+LWGENLLGLQ++
Sbjct: 263  QMIGSLDNGGSSASGSGGGSRSHRSRAWRNHRRSSSDRRYLWGENLLGLQEE 314



 Score =  127 bits (320), Expect(2) = 1e-76
 Identities = 79/186 (42%), Positives = 91/186 (48%)
 Frame = +1

Query: 19  MTDLKGSTSLGIDDSALHKEWDDALCPICMDHPHNAVLLLCSSFDNGCRPYICDSSYRHS 198
           M  +K   S   D  ALHKE D+  CP+CMDHPHNAVLLLCSS D GCR YICD+SYRHS
Sbjct: 1   MAGVKRKLSTESDVHALHKELDEVSCPVCMDHPHNAVLLLCSSHDKGCRSYICDTSYRHS 60

Query: 199 NCLDRFKKYFRSGPSQPDSVFIENPENPRLDTSESIFRASGSRNNLMEDXXXXXXXXXXT 378
           NCLDRFKK     P+ P       PE            AS   NN               
Sbjct: 61  NCLDRFKKLHSESPNDP------TPEGNL---------ASRENNN--------------- 90

Query: 379 ASIARTLEVIGDSNREESHRYIDMQDGSILGRDSFEPFRQRIGGEHISGSSLNLKCPLCR 558
                +L   G ++R   HR      GS    +S    R+R+  E  S    NLKCPLCR
Sbjct: 91  ----ESLNEHGTASRSSFHRE-STNRGSAWDSESLRR-RRRVDEEEQSEDITNLKCPLCR 144

Query: 559 GSVKCW 576
           G+V  W
Sbjct: 145 GTVLGW 150


>ref|XP_002265815.1| PREDICTED: uncharacterized protein LOC100263112 [Vitis vinifera]
          Length = 347

 Score =  187 bits (474), Expect(2) = 2e-75
 Identities = 94/167 (56%), Positives = 118/167 (70%), Gaps = 1/167 (0%)
 Frame = +3

Query: 648  GSVKCWEIVEEARRYLDLKQRSCSLESCSFTGNYGELRRHARRVHPTNRPALVDQSRQRN 827
            G+V  W++VEEAR  L+LK RSCS ESCSF+GNY ELRRHARRVHPT RPA +D SR+R+
Sbjct: 151  GAVLGWKVVEEARESLNLKPRSCSRESCSFSGNYRELRRHARRVHPTTRPADIDPSRERS 210

Query: 828  WRHLENQQEYGDIVSAIRSAMPGAIVFGDYVIETGDGFSANRDNNSGESSGPLLTSFILY 1007
            WR LE+Q+E+GDI+SAIRSAMPGAIV GDY IE+ D  +  R++ + E +GP  T+F  +
Sbjct: 211  WRRLEHQREHGDIISAIRSAMPGAIVLGDYAIESEDMLAGGRESGNEEGNGPWWTTFFWF 270

Query: 1008 QMMRPFSPVSEP-XXXXXXXXXXXXXXXXLSDRRHLWGENLLGLQDD 1145
            QM+   +  +EP                 L+ RR LWGENLLGLQDD
Sbjct: 271  QMIGSINSAAEPRSRSRALTRRRQSARAALTRRRFLWGENLLGLQDD 317



 Score =  124 bits (311), Expect(2) = 2e-75
 Identities = 77/186 (41%), Positives = 96/186 (51%)
 Frame = +1

Query: 19  MTDLKGSTSLGIDDSALHKEWDDALCPICMDHPHNAVLLLCSSFDNGCRPYICDSSYRHS 198
           M   K S S   D  AL KEWDD  CPICMDHPHNAVLLLCSS + GCR YICD+SYRH+
Sbjct: 1   MAGKKQSMSTDADIHALPKEWDDVSCPICMDHPHNAVLLLCSSHEMGCRSYICDTSYRHA 60

Query: 199 NCLDRFKKYFRSGPSQPDSVFIENPENPRLDTSESIFRASGSRNNLMEDXXXXXXXXXXT 378
           NCLDRFK   R G + P++        P   T+   + ++ S  NL              
Sbjct: 61  NCLDRFK---RLGANLPNTSL-----QPSSSTTNQSYSSNASIVNL-----------GLR 101

Query: 379 ASIARTLEVIGDSNREESHRYIDMQDGSILGRDSFEPFRQRIGGEHISGSSLNLKCPLCR 558
             I  T E  G+ N  E +  + ++           P R  +  E+ S  SL+L CPLCR
Sbjct: 102 LGIDST-EAHGNGNPNEGNGLLSVR----------IPRRSELNAENSSELSLSLTCPLCR 150

Query: 559 GSVKCW 576
           G+V  W
Sbjct: 151 GAVLGW 156


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