BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005509
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37538.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis...    76   3e-12
emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]    76   3e-12
gb|ACY01922.1| hypothetical protein [Beta vulgaris]                    73   2e-11
ref|XP_003602612.1| DNA cross-link repair 1B protein [Medicago t...    72   4e-11

>emb|CBI37538.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/60 (55%), Positives = 40/60 (66%)
 Frame = -2

Query: 433 AKKDSSSVWHICYSSHSSXXXXXXXXXXXQPKKVVSTTPSCSAMELNYVKKHCLNSQVSS 254
           A +D   +WH+CYS HSS            PK+VVSTTPSC AMELNYVKKHC +S ++S
Sbjct: 329 AVRDQFGIWHVCYSIHSSRQELEWALQLLAPKRVVSTTPSCRAMELNYVKKHCFSSHITS 388


>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
          Length = 552

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/60 (55%), Positives = 40/60 (66%)
 Frame = -2

Query: 433 AKKDSSSVWHICYSSHSSXXXXXXXXXXXQPKKVVSTTPSCSAMELNYVKKHCLNSQVSS 254
           A +D   +WH+CYS HSS            PK+VVSTTPSC AMELNYVKKHC +S ++S
Sbjct: 295 AVRDQFGIWHVCYSIHSSRQELEWALQLLAPKRVVSTTPSCRAMELNYVKKHCFSSHITS 354


>emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]
          Length = 1066

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/60 (55%), Positives = 40/60 (66%)
 Frame = -2

Query: 433 AKKDSSSVWHICYSSHSSXXXXXXXXXXXQPKKVVSTTPSCSAMELNYVKKHCLNSQVSS 254
           A +D   +WH+CYS HSS            PK+VVSTTPSC AMELNYVKKHC +S ++S
Sbjct: 809 AVRDQFGIWHVCYSIHSSRQELEWALQLLAPKRVVSTTPSCRAMELNYVKKHCFSSHITS 868


>gb|ACY01922.1| hypothetical protein [Beta vulgaris]
          Length = 551

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/59 (55%), Positives = 36/59 (61%)
 Frame = -2

Query: 427 KDSSSVWHICYSSHSSXXXXXXXXXXXQPKKVVSTTPSCSAMELNYVKKHCLNSQVSSD 251
           KD   VWH+CYS HSS            PK VVSTTP C AMEL YVKKHC N++ S D
Sbjct: 298 KDQFGVWHVCYSMHSSRQELEWAMELLSPKWVVSTTPECRAMELEYVKKHCFNNRASDD 356


>ref|XP_003602612.1| DNA cross-link repair 1B protein [Medicago truncatula]
           gi|355491660|gb|AES72863.1| DNA cross-link repair 1B
           protein [Medicago truncatula]
          Length = 571

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/65 (50%), Positives = 40/65 (61%)
 Frame = -2

Query: 433 AKKDSSSVWHICYSSHSSXXXXXXXXXXXQPKKVVSTTPSCSAMELNYVKKHCLNSQVSS 254
           A KD   VWH+CYS HSS            P+ VVSTTP C AM+LNYVKK+C NS+VS 
Sbjct: 320 AVKDQFGVWHVCYSMHSSKEELEEALQLLAPRWVVSTTPPCRAMQLNYVKKYCFNSKVSL 379

Query: 253 DGQAI 239
           +   +
Sbjct: 380 NNSVV 384