BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005508
         (1592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523766.1| dc50, putative [Ricinus communis] gi|2235369...    91   9e-16
ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp....    86   2e-14
gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana] gi|196...    86   2e-14
ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger...    86   2e-14
dbj|BAJ34585.1| unnamed protein product [Thellungiella halophila]      85   6e-14

>ref|XP_002523766.1| dc50, putative [Ricinus communis] gi|223536978|gb|EEF38615.1| dc50,
            putative [Ricinus communis]
          Length = 210

 Score = 90.9 bits (224), Expect = 9e-16
 Identities = 49/86 (56%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
 Frame = -3

Query: 1590 VTFDEKKSMEEAIHEMNGVDLDGRAITVDKAQPHQ-----XXXXXXXXXXXXXXXXXXXX 1426
            VTFDEKK+MEEAI EMNG+DLDGR ITVDKAQPHQ                         
Sbjct: 53   VTFDEKKAMEEAIEEMNGMDLDGRTITVDKAQPHQGSGREHDGDRNRDRGRDRDQNRDHG 112

Query: 1425 XXXXXXXXGECFKCGKPGHFARECPS 1348
                    GECFKCGKPGHFARECPS
Sbjct: 113  GRRPSGGGGECFKCGKPGHFARECPS 138


>ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297321156|gb|EFH51577.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 247

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 45/83 (54%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
 Frame = -3

Query: 1590 VTFDEKKSMEEAIHEMNGVDLDGRAITVDKAQPHQ--XXXXXXXXXXXXXXXXXXXXXXX 1417
            +TFDEKK+M+EAI  MNG+DLDGR ITVDKAQPHQ                         
Sbjct: 53   ITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQPHQGGSGRDHDGDRSRDRGYDRDRSRPS 112

Query: 1416 XXXXXGECFKCGKPGHFARECPS 1348
                 G+CFKCGKPGHFARECPS
Sbjct: 113  GGRGGGDCFKCGKPGHFARECPS 135


>gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana] gi|19699180|gb|AAL90956.1|
            AT3g26420/F20C19_14 [Arabidopsis thaliana]
          Length = 148

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 45/83 (54%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
 Frame = -3

Query: 1590 VTFDEKKSMEEAIHEMNGVDLDGRAITVDKAQPHQ--XXXXXXXXXXXXXXXXXXXXXXX 1417
            +TFDEKK+M+EAI  MNG+DLDGR ITVDKAQPHQ                         
Sbjct: 53   ITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPS 112

Query: 1416 XXXXXGECFKCGKPGHFARECPS 1348
                 G+CFKCGKPGHFARECPS
Sbjct: 113  GGRGGGDCFKCGKPGHFARECPS 135


>ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
            protein [Arabidopsis thaliana]
            gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14
            [Arabidopsis thaliana] gi|9294301|dbj|BAB02203.1| unnamed
            protein product [Arabidopsis thaliana]
            gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis
            thaliana] gi|18377412|gb|AAL66872.1| unknown protein
            [Arabidopsis thaliana] gi|62320797|dbj|BAD93728.1|
            RNA-binding protein [Arabidopsis thaliana]
            gi|110742443|dbj|BAE99140.1| putative RNA-binding protein
            [Arabidopsis thaliana] gi|332643635|gb|AEE77156.1| RNA
            recognition motif and CCHC-type zinc finger
            domain-containing protein [Arabidopsis thaliana]
          Length = 245

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 45/83 (54%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
 Frame = -3

Query: 1590 VTFDEKKSMEEAIHEMNGVDLDGRAITVDKAQPHQ--XXXXXXXXXXXXXXXXXXXXXXX 1417
            +TFDEKK+M+EAI  MNG+DLDGR ITVDKAQPHQ                         
Sbjct: 53   ITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPS 112

Query: 1416 XXXXXGECFKCGKPGHFARECPS 1348
                 G+CFKCGKPGHFARECPS
Sbjct: 113  GGRGGGDCFKCGKPGHFARECPS 135


>dbj|BAJ34585.1| unnamed protein product [Thellungiella halophila]
          Length = 259

 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 45/87 (51%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
 Frame = -3

Query: 1590 VTFDEKKSMEEAIHEMNGVDLDGRAITVDKAQPHQ------XXXXXXXXXXXXXXXXXXX 1429
            +TFDEKK+M+EAI  MNG+DLDGR ITVDKAQPHQ                         
Sbjct: 53   ITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQPHQGGSGRDHDGDRSRGDRGYDRDRSRP 112

Query: 1428 XXXXXXXXXGECFKCGKPGHFARECPS 1348
                     G+CFKCGKPGHFARECPS
Sbjct: 113  SGGGRGSGGGDCFKCGKPGHFARECPS 139