BLASTX nr result

ID: Coptis25_contig00005490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005490
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40561.3| unnamed protein product [Vitis vinifera]              141   3e-31
ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258...   130   7e-28
emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]   130   7e-28
ref|XP_004134301.1| PREDICTED: uncharacterized protein LOC101205...   129   1e-27
ref|XP_002516668.1| transcription factor, putative [Ricinus comm...   127   4e-27

>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
          Length = 897

 Score =  141 bits (355), Expect = 3e-31
 Identities = 87/259 (33%), Positives = 127/259 (49%), Gaps = 4/259 (1%)
 Frame = -2

Query: 765 WRCSQMALPGKSICQKHQMQHENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 586
           WRCS+ A  GKS C+KH +Q +N                                     
Sbjct: 16  WRCSETASKGKSYCEKHCLQIKNQSERKKREREEGKISGSGEFAGGGGGERTGEKRRRRK 75

Query: 585 XXLIENNVSVGEELVLVGDLKTVKQLVKSKDCRGGKKELVSYGELSSKFGEVERKITRNV 406
               + +    +   LV DL+    + K KD R  +   ++  ++ S  G        N 
Sbjct: 76  ESDSDGS---DDNSTLVKDLRKRHPITK-KD-RVNRIVDINSDKIESNCG--------NG 122

Query: 405 YAKLGGEGRLATEEKETTKK---DHDSKNKEQKRLMCHQCLRSDKAGIIYCSNCKRKRYC 235
            A+ GG  R +TE++  +     D  +KNKE   LMCHQC R+DK+G+++CS+C RKRYC
Sbjct: 123 KAESGGGQRSSTEDQSKSGSRISDKLNKNKEHGSLMCHQCQRNDKSGVVHCSSCTRKRYC 182

Query: 234 HDCITKWYPGKAFEEVRTACPYCRGHCNCKACLDGEIYVGKNWK-AGGNVKLQRXXXXXX 58
            +CI KWYP K  +E+ +ACP+C G+CNCKACL   ++V  N K    +VKLQR      
Sbjct: 183 FECIAKWYPEKTRDEIESACPFCCGNCNCKACLREVLFVKANHKELDDSVKLQRLQYLLF 242

Query: 57  XXXXLVRQIHSEQNCELEM 1
               ++R +H EQ  E+E+
Sbjct: 243 KALPVLRHVHQEQKSEVEI 261


>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
          Length = 1035

 Score =  130 bits (326), Expect = 7e-28
 Identities = 57/117 (48%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
 Frame = -2

Query: 348 KDHDSKNKEQKRLMCHQCLRSDKAGIIYCSNCKRKRYCHDCITKWYPGKAFEEVRTACPY 169
           +D  +KNKE   LMCHQC R+DK+G+++CS+C RKRYC +CI KWYP K  +E+ +ACP+
Sbjct: 169 QDKLNKNKEHGSLMCHQCQRNDKSGVVHCSSCTRKRYCFECIAKWYPEKTRDEIESACPF 228

Query: 168 CRGHCNCKACLDGEIYVGKNWK-AGGNVKLQRXXXXXXXXXXLVRQIHSEQNCELEM 1
           C G+CNCKACL   ++V  N K    +VKLQR          ++R +H EQ  E+E+
Sbjct: 229 CCGNCNCKACLREVLFVKANHKELDDSVKLQRLQYLLFKALPVLRHVHQEQKSEVEI 285


>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
          Length = 1160

 Score =  130 bits (326), Expect = 7e-28
 Identities = 57/117 (48%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
 Frame = -2

Query: 348 KDHDSKNKEQKRLMCHQCLRSDKAGIIYCSNCKRKRYCHDCITKWYPGKAFEEVRTACPY 169
           +D  +KNKE   LMCHQC R+DK+G+++CS+C RKRYC +CI KWYP K  +E+ +ACP+
Sbjct: 169 QDKLNKNKEHGSLMCHQCQRNDKSGVVHCSSCTRKRYCFECIAKWYPEKTRDEIESACPF 228

Query: 168 CRGHCNCKACLDGEIYVGKNWK-AGGNVKLQRXXXXXXXXXXLVRQIHSEQNCELEM 1
           C G+CNCKACL   ++V  N K    +VKLQR          ++R +H EQ  E+E+
Sbjct: 229 CCGNCNCKACLREVLFVKANHKELDDSVKLQRLQYLLFKALPVLRHVHQEQKSEVEI 285


>ref|XP_004134301.1| PREDICTED: uncharacterized protein LOC101205548 [Cucumis sativus]
          Length = 993

 Score =  129 bits (324), Expect = 1e-27
 Identities = 88/286 (30%), Positives = 127/286 (44%), Gaps = 22/286 (7%)
 Frame = -2

Query: 792 QCSRTGTPFWRCSQMALPGKSICQKH--QMQHENXXXXXXXXXXXXXXXXXXXXXXXXXX 619
           +C R     WRC ++A PGKS C +H  Q+  +N                          
Sbjct: 8   RCKRNDGARWRCKELASPGKSYCDRHLIQLMKQNLNYKVRNYGDRGLCSGGRVMEEAGKR 67

Query: 618 XXXXXXXXXXXXXLIENNVSVGEELVLVGDLKTVKQLVK-------------SKDCR--- 487
                              S+GEE     +L   + LV+             SKD +   
Sbjct: 68  NEVRPRFG-----------SLGEESA--DELDRNRSLVRKQKRQLCNRENNFSKDAKIGR 114

Query: 486 -GGKKELVSYGELSSKFGEVERKITRNVYAKLGGEGRLATEEKETTKKDHDSKNKEQKR- 313
             GK EL ++ +LS      + K T +   +LG   +       T  K  ++    +K  
Sbjct: 115 DSGKSELTAF-KLS------DGKDTADSVKRLGASAKRKRNHVVTNGKSVETDKPNKKNG 167

Query: 312 --LMCHQCLRSDKAGIIYCSNCKRKRYCHDCITKWYPGKAFEEVRTACPYCRGHCNCKAC 139
             LMCHQCLRSD +G+++CSNC+RKR+C+ CI +WYP K  E+V  ACP CRGHCNCKAC
Sbjct: 168 GSLMCHQCLRSDTSGVVFCSNCQRKRFCYKCIERWYPDKTREDVENACPCCRGHCNCKAC 227

Query: 138 LDGEIYVGKNWKAGGNVKLQRXXXXXXXXXXLVRQIHSEQNCELEM 1
           L   +      +   +VK++R          ++R I  EQ+ ELE+
Sbjct: 228 LREFVEFAPK-ELDASVKVERLKFLLHKVLPILRHIQREQSYELEV 272


>ref|XP_002516668.1| transcription factor, putative [Ricinus communis]
           gi|223544163|gb|EEF45687.1| transcription factor,
           putative [Ricinus communis]
          Length = 939

 Score =  127 bits (319), Expect = 4e-27
 Identities = 57/117 (48%), Positives = 76/117 (64%), Gaps = 2/117 (1%)
 Frame = -2

Query: 345 DHDSKNKEQKRLMCHQCLRSDKAGIIYCSNCKRKRYCHDCITKWYPGKAFEEVRTACPYC 166
           D+    K Q+ LMCHQC +SD+ G++ CSNC+RKRYC+DC+ KWYP K +E++  ACP+C
Sbjct: 149 DNTESKKVQRNLMCHQCWKSDRNGVVICSNCRRKRYCYDCLAKWYPEKTWEQIEIACPFC 208

Query: 165 RGHCNCKACL--DGEIYVGKNWKAGGNVKLQRXXXXXXXXXXLVRQIHSEQNCELEM 1
           RG+CNC+ CL  D    VG N +A  N KLQ           L+R I  EQ+ ELE+
Sbjct: 209 RGNCNCRLCLKEDAVALVG-NTEADKNTKLQNFLYLLYKTLPLLRHIQQEQSSELEV 264


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