BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005485
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234016.1| GTP-binding nuclear protein Ran1 [Solanum ly...   249   4e-64
ref|XP_002866070.1| predicted protein [Arabidopsis lyrata subsp....   247   2e-63
emb|CBI21000.3| unnamed protein product [Vitis vinifera]              247   2e-63
ref|XP_002284967.1| PREDICTED: GTP-binding nuclear protein Ran-3...   247   2e-63
emb|CBI28152.3| unnamed protein product [Vitis vinifera]              247   2e-63

>ref|NP_001234016.1| GTP-binding nuclear protein Ran1 [Solanum lycopersicum]
           gi|585777|sp|P38546.1|RAN1_SOLLC RecName:
           Full=GTP-binding nuclear protein Ran1; AltName:
           Full=Ras-related nuclear protein 1
           gi|453561|gb|AAC37402.1| Ran protein/TC4 protein
           [Solanum lycopersicum] gi|77745509|gb|ABB02653.1|
           Ran/TC4-like protein [Solanum tuberosum]
           gi|82623375|gb|ABB87102.1| Ran protein/TC4 protein-like
           [Solanum tuberosum]
          Length = 221

 Score =  249 bits (636), Expect = 4e-64
 Identities = 120/142 (84%), Positives = 122/142 (85%)
 Frame = +1

Query: 1   DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV 180
           DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV
Sbjct: 80  DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV 139

Query: 181 TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVHIDXXXXXX 360
           TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVHID      
Sbjct: 140 TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFVESPALAPPEVHIDLAAQAL 199

Query: 361 XXXXXXXXSHQPLPXXXXELFE 426
                   ++QPLP    E FE
Sbjct: 200 HEEELQQAANQPLPDDDDEAFE 221


>ref|XP_002866070.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311905|gb|EFH42329.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 193

 Score =  247 bits (630), Expect = 2e-63
 Identities = 119/142 (83%), Positives = 121/142 (85%)
 Frame = +1

Query: 1   DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV 180
           DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV
Sbjct: 52  DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV 111

Query: 181 TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVHIDXXXXXX 360
           TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVHID      
Sbjct: 112 TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDKNLHFVESPALAPPEVHIDHAAQQK 171

Query: 361 XXXXXXXXSHQPLPXXXXELFE 426
                   + QPLP    + FE
Sbjct: 172 NEADLIAAASQPLPDDDDDAFE 193


>emb|CBI21000.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  247 bits (630), Expect = 2e-63
 Identities = 119/142 (83%), Positives = 121/142 (85%)
 Frame = +1

Query: 1   DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV 180
           DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV
Sbjct: 113 DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV 172

Query: 181 TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVHIDXXXXXX 360
           TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVHID      
Sbjct: 173 TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVHIDLAAQQQ 232

Query: 361 XXXXXXXXSHQPLPXXXXELFE 426
                   + QPLP    + FE
Sbjct: 233 HEAELAAAASQPLPDDDDDAFE 254


>ref|XP_002284967.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis vinifera]
           gi|225445410|ref|XP_002285018.1| PREDICTED: GTP-binding
           nuclear protein Ran-3-like [Vitis vinifera]
          Length = 221

 Score =  247 bits (630), Expect = 2e-63
 Identities = 119/142 (83%), Positives = 121/142 (85%)
 Frame = +1

Query: 1   DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV 180
           DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV
Sbjct: 80  DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV 139

Query: 181 TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVHIDXXXXXX 360
           TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVHID      
Sbjct: 140 TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVHIDLAAQQQ 199

Query: 361 XXXXXXXXSHQPLPXXXXELFE 426
                   + QPLP    + FE
Sbjct: 200 HEAELAAAASQPLPDDDDDAFE 221


>emb|CBI28152.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  247 bits (630), Expect = 2e-63
 Identities = 119/142 (83%), Positives = 121/142 (85%)
 Frame = +1

Query: 1   DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV 180
           DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV
Sbjct: 119 DGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV 178

Query: 181 TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVHIDXXXXXX 360
           TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVHID      
Sbjct: 179 TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVHIDLAAQQQ 238

Query: 361 XXXXXXXXSHQPLPXXXXELFE 426
                   + QPLP    + FE
Sbjct: 239 HEAELAAAASQPLPDDDDDAFE 260