BLASTX nr result

ID: Coptis25_contig00005484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005484
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322468.1| predicted protein [Populus trichocarpa] gi|1...    89   1e-15
ref|XP_002267852.1| PREDICTED: transmembrane ascorbate ferriredu...    86   1e-14
gb|AAM62824.1| cytochrome b561 [Arabidopsis thaliana]                  86   1e-14
ref|NP_567723.1| cytochrome b561/ferric reductase transmembrane ...    84   3e-14
dbj|BAD25232.1| putative cytochrome [Oryza sativa Japonica Group]      84   3e-14

>ref|XP_002322468.1| predicted protein [Populus trichocarpa] gi|118483693|gb|ABK93740.1|
           unknown [Populus trichocarpa]
           gi|222869464|gb|EEF06595.1| predicted protein [Populus
           trichocarpa]
          Length = 230

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 45/67 (67%), Positives = 53/67 (79%)
 Frame = +3

Query: 3   YVLAVCSAVLGFLEKLTFLENSGLYKYGPEAFLVNFTAIVTTLYGAFVVFSAVTPDRVVD 182
           Y+LAV +A LGFLEKLTFLE+SG+ KYG EA LVNFTA+VT LYGAFV+ S +    V D
Sbjct: 164 YILAVGNAALGFLEKLTFLESSGIAKYGSEALLVNFTAVVTVLYGAFVILSVLGQAPVED 223

Query: 183 DFSYSSI 203
           D SYS+I
Sbjct: 224 DDSYSAI 230


>ref|XP_002267852.1| PREDICTED: transmembrane ascorbate ferrireductase 1 [Vitis
           vinifera] gi|147840876|emb|CAN73186.1| hypothetical
           protein VITISV_041528 [Vitis vinifera]
           gi|302143891|emb|CBI22752.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 44/67 (65%), Positives = 52/67 (77%)
 Frame = +3

Query: 3   YVLAVCSAVLGFLEKLTFLENSGLYKYGPEAFLVNFTAIVTTLYGAFVVFSAVTPDRVVD 182
           YVL V +A LGFLEKLTFLE+SGL KYG EA LVNFTAIVT LYG FVV +A++     +
Sbjct: 164 YVLVVGNAELGFLEKLTFLESSGLAKYGAEALLVNFTAIVTILYGVFVVMTALSQPPPEE 223

Query: 183 DFSYSSI 203
           D+ YS+I
Sbjct: 224 DYGYSAI 230


>gb|AAM62824.1| cytochrome b561 [Arabidopsis thaliana]
          Length = 237

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 48/74 (64%), Positives = 55/74 (74%), Gaps = 7/74 (9%)
 Frame = +3

Query: 3   YVLAVCSAVLGFLEKLTFLENSGLYKYGPEAFLVNFTAIVTTLYGAFVVF--SAVTPDRV 176
           Y+LAV +A LGFLEKLTFLEN GL KYG EAFL+NFTAI+T L+GAFVV   SA +P   
Sbjct: 164 YILAVGNAALGFLEKLTFLENGGLDKYGSEAFLINFTAIITILFGAFVVLTASAESPSPS 223

Query: 177 VD-----DFSYSSI 203
           V      DFSYS+I
Sbjct: 224 VSNDDSVDFSYSAI 237


>ref|NP_567723.1| cytochrome b561/ferric reductase transmembrane family protein
           [Arabidopsis thaliana]
           gi|75154291|sp|Q8L856.1|ACFR1_ARATH RecName:
           Full=Transmembrane ascorbate ferrireductase 1; AltName:
           Full=Cytochrome b561; Short=Artb561-1; Short=AtCytb561;
           AltName: Full=Tonoplast Cyt-b561; Short=TCytb
           gi|21539471|gb|AAM53288.1| putative protein [Arabidopsis
           thaliana] gi|25084153|gb|AAN72187.1| putative protein
           [Arabidopsis thaliana] gi|332659678|gb|AEE85078.1|
           cytochrome b561/ferric reductase transmembrane family
           protein [Arabidopsis thaliana]
          Length = 239

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 48/77 (62%), Positives = 56/77 (72%), Gaps = 10/77 (12%)
 Frame = +3

Query: 3   YVLAVCSAVLGFLEKLTFLENSGLYKYGPEAFLVNFTAIVTTLYGAFVVFSA-------- 158
           Y+LAV +A LGFLEKLTFLEN GL KYG EAFL+NFTAI+T L+GAFVV +A        
Sbjct: 164 YILAVGNAALGFLEKLTFLENGGLDKYGSEAFLINFTAIITILFGAFVVLTASAESPSPS 223

Query: 159 --VTPDRVVDDFSYSSI 203
             V+ D  V DFSYS+I
Sbjct: 224 PSVSNDDSV-DFSYSAI 239


>dbj|BAD25232.1| putative cytochrome [Oryza sativa Japonica Group]
          Length = 249

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 41/67 (61%), Positives = 53/67 (79%)
 Frame = +3

Query: 3   YVLAVCSAVLGFLEKLTFLENSGLYKYGPEAFLVNFTAIVTTLYGAFVVFSAVTPDRVVD 182
           Y+LA+ +A LGFLEKLTFL++SGL KYG EAFLVNFTA++  L+GA VV +AV+P RV +
Sbjct: 180 YILALATAELGFLEKLTFLQSSGLDKYGAEAFLVNFTALIVVLFGASVVVAAVSPARVEE 239

Query: 183 DFSYSSI 203
              Y+ I
Sbjct: 240 PHEYAPI 246


Top