BLASTX nr result
ID: Coptis25_contig00005476
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00005476
(1579 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276414.2| PREDICTED: somatic embryogenesis receptor ki... 182 e-114
gb|ABR18800.1| somatic embryogenesis receptor-like kinase 1 [Sol... 176 e-113
ref|XP_002270847.1| PREDICTED: somatic embryogenesis receptor ki... 177 e-112
ref|XP_003556185.1| PREDICTED: somatic embryogenesis receptor ki... 173 e-112
ref|NP_001233866.1| somatic embryogenesis receptor kinase 1 [Sol... 174 e-112
>ref|XP_002276414.2| PREDICTED: somatic embryogenesis receptor kinase 1-like [Vitis
vinifera] gi|147769566|emb|CAN65708.1| hypothetical
protein VITISV_020732 [Vitis vinifera]
gi|296082486|emb|CBI21491.3| unnamed protein product
[Vitis vinifera]
Length = 624
Score = 182 bits (461), Expect(4) = e-114
Identities = 101/183 (55%), Positives = 121/183 (66%), Gaps = 7/183 (3%)
Frame = -1
Query: 889 ISFSNNPNLCGRIIGRXXXXXXXXXXXXXXXXXXXXSA----SSTRAFIGGVATGPVLLV 722
ISF+NN NLCG +IG+ S+ S+T A GGVA G LL
Sbjct: 192 ISFANNLNLCGPVIGKPCPGSPPFSPPPPFVPPSTVSSPGGNSATGAIAGGVAAGAALLF 251
Query: 721 VALAIGITWWFRRKPQEQFFDV--EEDPKVTLGQLKRYSLKELRAATDGFSKKNVRGTGG 548
A AIG WW RRKPQE FFDV EEDP+V LGQLKR+SL+EL+ ATD FS KN+ G GG
Sbjct: 252 AAPAIGFAWWRRRKPQEHFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGG 311
Query: 547 FGNVYEGHLRDGTLVAIKQLK-DYTLGGEQQFLAELEMVSVAVHHNLLPVYGFCMIESER 371
FG VY+G L DG+LVA+K+LK + T GGE QF E+EM+S+AVH NLL + GFCM +ER
Sbjct: 312 FGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 371
Query: 370 FLV 362
LV
Sbjct: 372 LLV 374
Score = 142 bits (358), Expect(4) = e-114
Identities = 68/100 (68%), Positives = 79/100 (79%)
Frame = -3
Query: 362 YPYMANGCVASCLRALPSSKSFLDWPTRKRIALGSARGLAYLHDHCVSKNLHRDVKAANI 183
YPYMANG VASCLR P S+ LDW TRKRIALGSARGL+YLHDHC K +HRDVKAANI
Sbjct: 375 YPYMANGSVASCLRERPPSEPPLDWTTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANI 434
Query: 182 LLDGDFEVVIGDFGLIKVVDHNEVPPKTGLRGTGSHMAPE 63
LLD +FE V+GDFGL K++D+ + T +RGT H+APE
Sbjct: 435 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 474
Score = 104 bits (259), Expect(4) = e-114
Identities = 53/84 (63%), Positives = 67/84 (79%)
Frame = -2
Query: 1137 VIRVDLANASLSGSLIPQLGQLESLMFLDLSGNKISGQIPSELGRLTNLVSLELFSNNFT 958
VIRVDL NA+LSG L+PQLGQL++L +L+L N ISGQIPS+LG LT+LVSL+L+ N FT
Sbjct: 70 VIRVDLGNAALSGQLVPQLGQLKNLQYLELYSNNISGQIPSDLGNLTSLVSLDLYLNRFT 129
Query: 957 GQIPMSLTNLPSLQFLDLSHNLLS 886
G IP +L L L+FL L++N LS
Sbjct: 130 GAIPDTLGKLTKLRFLRLNNNSLS 153
Score = 53.5 bits (127), Expect(4) = e-114
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = -3
Query: 1268 NEEANALFSLKQVLWDPDDVLRSWDEFDRHPCTWFHVKCNSD 1143
N E +AL SL+ L DP++VL+SWD +PCTWFHV CN++
Sbjct: 26 NMEGDALHSLRTNLEDPNNVLQSWDPTLVNPCTWFHVTCNNE 67
>gb|ABR18800.1| somatic embryogenesis receptor-like kinase 1 [Solanum peruvianum]
Length = 629
Score = 176 bits (446), Expect(4) = e-113
Identities = 99/183 (54%), Positives = 118/183 (64%), Gaps = 7/183 (3%)
Frame = -1
Query: 889 ISFSNNPNLCGRIIGRXXXXXXXXXXXXXXXXXXXXSA----SSTRAFIGGVATGPVLLV 722
ISF+NN +LCG + GR SA +T A GGVA G LL
Sbjct: 197 ISFANNLDLCGPVTGRPCPGSPPFSPPPPFVPPPPISAPGGNGATGAIAGGVAAGAALLF 256
Query: 721 VALAIGITWWFRRKPQEQFFDV--EEDPKVTLGQLKRYSLKELRAATDGFSKKNVRGTGG 548
A AI WW RRKPQE FFDV EEDP+V LGQLKR+SL+EL+ ATD FS KN+ G GG
Sbjct: 257 AAPAIAFAWWRRRKPQEYFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGG 316
Query: 547 FGNVYEGHLRDGTLVAIKQLK-DYTLGGEQQFLAELEMVSVAVHHNLLPVYGFCMIESER 371
FG VY+G L DG+LVA+K+LK + T GGE QF E+EM+S+AVH NLL + GFCM +ER
Sbjct: 317 FGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 376
Query: 370 FLV 362
LV
Sbjct: 377 LLV 379
Score = 145 bits (366), Expect(4) = e-113
Identities = 69/100 (69%), Positives = 80/100 (80%)
Frame = -3
Query: 362 YPYMANGCVASCLRALPSSKSFLDWPTRKRIALGSARGLAYLHDHCVSKNLHRDVKAANI 183
YPYMANG VASCLR P S+ LDWPTRKRIALGSARGL+YLHDHC K +HRDVKAANI
Sbjct: 380 YPYMANGSVASCLRERPPSEPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANI 439
Query: 182 LLDGDFEVVIGDFGLIKVVDHNEVPPKTGLRGTGSHMAPE 63
LLD +FE V+GDFGL K++D+ + T +RGT H+APE
Sbjct: 440 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 479
Score = 102 bits (254), Expect(4) = e-113
Identities = 59/108 (54%), Positives = 70/108 (64%), Gaps = 24/108 (22%)
Frame = -2
Query: 1137 VIRVDLANASLSGSLIPQLGQLESLMFLDLSGNKISGQIPSELGRLTNLVSLELFSNNF- 961
VIRVDL NA+LSG L+PQLG L++L +L+L N ISG IPS+LG LTNLVSL+L+ NNF
Sbjct: 75 VIRVDLGNAALSGLLVPQLGLLKNLQYLELYSNNISGVIPSDLGNLTNLVSLDLYLNNFV 134
Query: 960 -----------------------TGQIPMSLTNLPSLQFLDLSHNLLS 886
TG IPMSLTN+ SLQ LDLS+N LS
Sbjct: 135 GPIPDSLGKLSKLRFLRLNNNSLTGNIPMSLTNISSLQVLDLSNNRLS 182
Score = 55.1 bits (131), Expect(4) = e-113
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -3
Query: 1268 NEEANALFSLKQVLWDPDDVLRSWDEFDRHPCTWFHVKCNSD 1143
N E +AL SL+ L DP++VL+SWD +PCTWFHV CN+D
Sbjct: 31 NMEGDALHSLRVNLQDPNNVLQSWDPTLVNPCTWFHVTCNND 72
>ref|XP_002270847.1| PREDICTED: somatic embryogenesis receptor kinase 1 [Vitis vinifera]
gi|296088044|emb|CBI35327.3| unnamed protein product
[Vitis vinifera]
Length = 624
Score = 177 bits (448), Expect(4) = e-112
Identities = 99/183 (54%), Positives = 119/183 (65%), Gaps = 7/183 (3%)
Frame = -1
Query: 889 ISFSNNPNLCGRIIGRXXXXXXXXXXXXXXXXXXXXSA----SSTRAFIGGVATGPVLLV 722
ISF+NN +LCG + G S+ S+T A GGVA G LL
Sbjct: 192 ISFANNLDLCGPVTGHPCPGSPPFSPPPPFVPPPPISSQGGNSATGAIAGGVAAGAALLF 251
Query: 721 VALAIGITWWFRRKPQEQFFDV--EEDPKVTLGQLKRYSLKELRAATDGFSKKNVRGTGG 548
A AIG WW RRKPQE FFDV EEDP+V LGQLKR+SL+EL+ ATD FS KN+ G GG
Sbjct: 252 AAPAIGFAWWRRRKPQEYFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGG 311
Query: 547 FGNVYEGHLRDGTLVAIKQLK-DYTLGGEQQFLAELEMVSVAVHHNLLPVYGFCMIESER 371
FG VY+G L DG+LVA+K+LK + T GGE QF E+EM+S+AVH NLL + GFCM +ER
Sbjct: 312 FGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 371
Query: 370 FLV 362
LV
Sbjct: 372 LLV 374
Score = 146 bits (368), Expect(4) = e-112
Identities = 69/100 (69%), Positives = 81/100 (81%)
Frame = -3
Query: 362 YPYMANGCVASCLRALPSSKSFLDWPTRKRIALGSARGLAYLHDHCVSKNLHRDVKAANI 183
YPYMANG VASCLR P+S+ LDWPTRKRIALGSARGL+YLHDHC K +HRDVKAANI
Sbjct: 375 YPYMANGSVASCLRERPASEPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANI 434
Query: 182 LLDGDFEVVIGDFGLIKVVDHNEVPPKTGLRGTGSHMAPE 63
LLD +FE V+GDFGL K++D+ + T +RGT H+APE
Sbjct: 435 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 474
Score = 99.0 bits (245), Expect(4) = e-112
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = -2
Query: 1137 VIRVDLANASLSGSLIPQLGQLESLMFLDLSGNKISGQIPSELGRLTNLVSLELFSNNFT 958
VIRVDL NA+LSG L+PQLG L++L +L+L N ISG IPS+LG LT+LVSL+L+ N+FT
Sbjct: 70 VIRVDLGNAALSGQLVPQLGLLKNLQYLELYSNNISGPIPSDLGNLTSLVSLDLYLNSFT 129
Query: 957 GQIPMSLTNLPSLQFLDLSHNLLS 886
G IP +L L L+FL L++N L+
Sbjct: 130 GPIPETLGKLSKLRFLRLNNNSLT 153
Score = 55.5 bits (132), Expect(4) = e-112
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = -3
Query: 1289 SFMSNAINEEANALFSLKQVLWDPDDVLRSWDEFDRHPCTWFHVKCNSD 1143
SF+S N E +AL +L+ L DP++VL+SWD +PCTWFHV CNSD
Sbjct: 21 SFIS--ANMEGDALHTLRTNLEDPNNVLQSWDPTLVNPCTWFHVTCNSD 67
>ref|XP_003556185.1| PREDICTED: somatic embryogenesis receptor kinase 1-like [Glycine
max]
Length = 624
Score = 173 bits (439), Expect(4) = e-112
Identities = 98/183 (53%), Positives = 117/183 (63%), Gaps = 7/183 (3%)
Frame = -1
Query: 889 ISFSNNPNLCGRIIGRXXXXXXXXXXXXXXXXXXXXSA----SSTRAFIGGVATGPVLLV 722
ISF+NN +LCG + G SA +T A GGVA G LL
Sbjct: 192 ISFANNLDLCGPVTGHPCPGSPPFSPPPPFVPPPPISAPGGNGATGAIAGGVAAGAALLF 251
Query: 721 VALAIGITWWFRRKPQEQFFDV--EEDPKVTLGQLKRYSLKELRAATDGFSKKNVRGTGG 548
A AI WW RRKPQE FFDV EEDP+V LGQLKR+SL+EL+ ATD FS KN+ G GG
Sbjct: 252 AAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGG 311
Query: 547 FGNVYEGHLRDGTLVAIKQLK-DYTLGGEQQFLAELEMVSVAVHHNLLPVYGFCMIESER 371
FG VY+G L DG+LVA+K+LK + T GGE QF E+EM+S+AVH NLL + GFCM +ER
Sbjct: 312 FGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 371
Query: 370 FLV 362
LV
Sbjct: 372 LLV 374
Score = 144 bits (362), Expect(4) = e-112
Identities = 68/100 (68%), Positives = 79/100 (79%)
Frame = -3
Query: 362 YPYMANGCVASCLRALPSSKSFLDWPTRKRIALGSARGLAYLHDHCVSKNLHRDVKAANI 183
YPYMANG VASCLR P + LDWPTRKRIALGSARGL+YLHDHC K +HRDVKAANI
Sbjct: 375 YPYMANGSVASCLRERPPHQEPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANI 434
Query: 182 LLDGDFEVVIGDFGLIKVVDHNEVPPKTGLRGTGSHMAPE 63
LLD +FE V+GDFGL K++D+ + T +RGT H+APE
Sbjct: 435 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 474
Score = 104 bits (259), Expect(4) = e-112
Identities = 53/84 (63%), Positives = 67/84 (79%)
Frame = -2
Query: 1137 VIRVDLANASLSGSLIPQLGQLESLMFLDLSGNKISGQIPSELGRLTNLVSLELFSNNFT 958
VIRVDL NA+LSG L+PQLGQL++L +L+L N I+G IPS+LG LTNLVSL+L+ N+FT
Sbjct: 70 VIRVDLGNAALSGQLVPQLGQLKNLQYLELYSNNITGPIPSDLGNLTNLVSLDLYLNHFT 129
Query: 957 GQIPMSLTNLPSLQFLDLSHNLLS 886
G IP SL L L+FL L++N LS
Sbjct: 130 GPIPDSLGKLSKLRFLRLNNNSLS 153
Score = 55.5 bits (132), Expect(4) = e-112
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -3
Query: 1268 NEEANALFSLKQVLWDPDDVLRSWDEFDRHPCTWFHVKCNSD 1143
N E +AL SL+ L DP++VL+SWD +PCTWFHV CN+D
Sbjct: 26 NMEGDALHSLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCNND 67
>ref|NP_001233866.1| somatic embryogenesis receptor kinase 1 [Solanum lycopersicum]
gi|321146038|gb|ADW65657.1| somatic embryogenesis
receptor kinase 1 [Solanum lycopersicum]
gi|321146040|gb|ADW65658.1| somatic embryogenesis
receptor kinase 1 [Solanum lycopersicum]
Length = 629
Score = 174 bits (440), Expect(4) = e-112
Identities = 98/183 (53%), Positives = 117/183 (63%), Gaps = 7/183 (3%)
Frame = -1
Query: 889 ISFSNNPNLCGRIIGRXXXXXXXXXXXXXXXXXXXXSA----SSTRAFIGGVATGPVLLV 722
ISF+NN +LCG + GR SA +T A GGVA G LL
Sbjct: 197 ISFANNLDLCGPVTGRPCPGSPPFSPPPPFVPPPPISAPGGNGATGAIAGGVAAGAALLF 256
Query: 721 VALAIGITWWFRRKPQEQFFDV--EEDPKVTLGQLKRYSLKELRAATDGFSKKNVRGTGG 548
A AI WW RRKPQE FDV EEDP+V LGQLKR+SL+EL+ ATD FS KN+ G GG
Sbjct: 257 AAPAIAFAWWRRRKPQEYLFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGG 316
Query: 547 FGNVYEGHLRDGTLVAIKQLK-DYTLGGEQQFLAELEMVSVAVHHNLLPVYGFCMIESER 371
FG VY+G L DG+LVA+K+LK + T GGE QF E+EM+S+AVH NLL + GFCM +ER
Sbjct: 317 FGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 376
Query: 370 FLV 362
LV
Sbjct: 377 LLV 379
Score = 145 bits (366), Expect(4) = e-112
Identities = 69/100 (69%), Positives = 80/100 (80%)
Frame = -3
Query: 362 YPYMANGCVASCLRALPSSKSFLDWPTRKRIALGSARGLAYLHDHCVSKNLHRDVKAANI 183
YPYMANG VASCLR P S+ LDWPTRKRIALGSARGL+YLHDHC K +HRDVKAANI
Sbjct: 380 YPYMANGSVASCLRERPPSEPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANI 439
Query: 182 LLDGDFEVVIGDFGLIKVVDHNEVPPKTGLRGTGSHMAPE 63
LLD +FE V+GDFGL K++D+ + T +RGT H+APE
Sbjct: 440 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 479
Score = 102 bits (254), Expect(4) = e-112
Identities = 59/108 (54%), Positives = 70/108 (64%), Gaps = 24/108 (22%)
Frame = -2
Query: 1137 VIRVDLANASLSGSLIPQLGQLESLMFLDLSGNKISGQIPSELGRLTNLVSLELFSNNF- 961
VIRVDL NA+LSG L+PQLG L++L +L+L N ISG IPS+LG LTNLVSL+L+ NNF
Sbjct: 75 VIRVDLGNAALSGLLVPQLGLLKNLQYLELYSNNISGLIPSDLGNLTNLVSLDLYLNNFV 134
Query: 960 -----------------------TGQIPMSLTNLPSLQFLDLSHNLLS 886
TG IPMSLTN+ SLQ LDLS+N LS
Sbjct: 135 GPIPDSLGKLSKLRFLRLNNNSLTGNIPMSLTNISSLQVLDLSNNRLS 182
Score = 55.1 bits (131), Expect(4) = e-112
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -3
Query: 1268 NEEANALFSLKQVLWDPDDVLRSWDEFDRHPCTWFHVKCNSD 1143
N E +AL SL+ L DP++VL+SWD +PCTWFHV CN+D
Sbjct: 31 NMEGDALHSLRVNLQDPNNVLQSWDPTLVNPCTWFHVTCNND 72