BLASTX nr result

ID: Coptis25_contig00005472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005472
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531584.1| programmed cell death protein, putative [Ric...    58   2e-06

>ref|XP_002531584.1| programmed cell death protein, putative [Ricinus communis]
            gi|223528780|gb|EEF30787.1| programmed cell death
            protein, putative [Ricinus communis]
          Length = 1330

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
 Frame = -3

Query: 492  EFKCGVP*-GRSIFDNVLRDQ-KGTYLWSSYLDQEILLGDVDV---MFSRISIFCYPA 334
            EFKCGVP  GRS+F+ +LR+  K T LWS YLDQEI LGDVDV   +F R +    PA
Sbjct: 1234 EFKCGVPDRGRSMFEGILREYPKRTDLWSVYLDQEIRLGDVDVTRTLFERATSLSLPA 1291


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