BLASTX nr result

ID: Coptis25_contig00005454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005454
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263384.1| PREDICTED: uncharacterized protein LOC100245...   176   5e-42
ref|XP_002518043.1| conserved hypothetical protein [Ricinus comm...   173   3e-41
ref|XP_003601646.1| hypothetical protein MTR_3g083900 [Medicago ...   158   8e-37
gb|AFK42734.1| unknown [Lotus japonicus]                              156   4e-36
ref|NP_001242634.1| uncharacterized protein LOC100785081 [Glycin...   155   9e-36

>ref|XP_002263384.1| PREDICTED: uncharacterized protein LOC100245254 [Vitis vinifera]
           gi|298205214|emb|CBI17273.3| unnamed protein product
           [Vitis vinifera]
          Length = 425

 Score =  176 bits (445), Expect = 5e-42
 Identities = 89/163 (54%), Positives = 124/163 (76%), Gaps = 4/163 (2%)
 Frame = -2

Query: 673 LELKNVEIFPDDIFMDEIIKAAKSSRKFCSSLPL---QGVLQWLVQKVQDRIILCTLRRL 503
           +ELKNVEIFP+D+++ EII AAKSSRK  S + +   +  L+W V+KVQD+IILC LR+ 
Sbjct: 255 MELKNVEIFPNDVYLGEIIDAAKSSRKLFSHMSILETRSSLEWFVRKVQDKIILCALRQS 314

Query: 502 IVKDANKSRHSFEYSDRDETVIAHTLGGIDAFIKLPHYWPIVNSILKLTSLKCQNNRKKK 323
           IVK ANKSRHS EY DRDE ++AH +GG+DA+IK+   WP+ N+ LKL SLK  + + K 
Sbjct: 315 IVKGANKSRHSLEYLDRDEIIVAHMVGGVDAYIKVCQGWPVSNNALKLKSLKSSDQQSKG 374

Query: 322 LSLS-SCQVEELLSSMDVQAQQNLLNFVDAIEELLAKRI*SYL 197
           +SLS  C+VEE+ +S+DV  ++N+ +FVDAIEE+L +++ S L
Sbjct: 375 ISLSFLCKVEEMANSLDVSIRKNISSFVDAIEEILVQQMQSKL 417


>ref|XP_002518043.1| conserved hypothetical protein [Ricinus communis]
           gi|223542639|gb|EEF44176.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 415

 Score =  173 bits (438), Expect = 3e-41
 Identities = 90/161 (55%), Positives = 122/161 (75%), Gaps = 6/161 (3%)
 Frame = -2

Query: 673 LELKNVEIFPDDIFMDEIIKAAKSSRK-----FCSSLPLQGVLQWLVQKVQDRIILCTLR 509
           +ELKNVEIFP+DI++ +I+ AAKS RK       +    +  L WLV+KVQDRII  TLR
Sbjct: 243 MELKNVEIFPNDIYISDIVDAAKSFRKEFLYSALTESETRSSLGWLVRKVQDRIIQFTLR 302

Query: 508 RLIVKDANKSRHSFEYSDRDETVIAHTLGGIDAFIKLPHYWPIVNSILKLTSLKCQNNRK 329
           RL+VK +NKSR+SFEY DRDETV+AH +GG+DAFIKL   WP+  S LKL SLK  N+  
Sbjct: 303 RLVVKSSNKSRYSFEYLDRDETVVAHLVGGVDAFIKLSQGWPVSRSPLKLISLKSSNHHS 362

Query: 328 KKLSLS-SCQVEELLSSMDVQAQQNLLNFVDAIEELLAKRI 209
           K++SLS  C+VEE+++S+D+Q + NLL+FV+ IE+LL +++
Sbjct: 363 KEISLSFLCRVEEVVNSLDIQMRLNLLSFVEVIEKLLVEQM 403


>ref|XP_003601646.1| hypothetical protein MTR_3g083900 [Medicago truncatula]
           gi|355490694|gb|AES71897.1| hypothetical protein
           MTR_3g083900 [Medicago truncatula]
          Length = 439

 Score =  158 bits (400), Expect = 8e-37
 Identities = 80/155 (51%), Positives = 112/155 (72%)
 Frame = -2

Query: 673 LELKNVEIFPDDIFMDEIIKAAKSSRKFCSSLPLQGVLQWLVQKVQDRIILCTLRRLIVK 494
           + LK++++FP+DI+MD+I+  AKS  K          LQWL+QK+QDRIIL TLR L+VK
Sbjct: 283 MTLKDIQVFPNDIYMDDIVDTAKSVSK--------SSLQWLIQKLQDRIILSTLRCLVVK 334

Query: 493 DANKSRHSFEYSDRDETVIAHTLGGIDAFIKLPHYWPIVNSILKLTSLKCQNNRKKKLSL 314
           DANKSR+S EY D+DET++AH + GIDA+IKL H WPI  S LKL S+K  +  KK  S 
Sbjct: 335 DANKSRYSLEYIDKDETIVAHLVRGIDAYIKLSHGWPIFGSPLKLISIKGSDILKKSSSF 394

Query: 313 SSCQVEELLSSMDVQAQQNLLNFVDAIEELLAKRI 209
             C+VE L +S+D   ++N+L FVDA+E++L +++
Sbjct: 395 -LCEVENLANSLDTHTRKNILGFVDAVEKVLIEQL 428


>gb|AFK42734.1| unknown [Lotus japonicus]
          Length = 403

 Score =  156 bits (394), Expect = 4e-36
 Identities = 79/155 (50%), Positives = 111/155 (71%)
 Frame = -2

Query: 673 LELKNVEIFPDDIFMDEIIKAAKSSRKFCSSLPLQGVLQWLVQKVQDRIILCTLRRLIVK 494
           ++LKNV++FP+DI +++I+ AAKS  KF         LQW +QKVQDRIIL  LR L VK
Sbjct: 246 MKLKNVQVFPNDIHVNDIVDAAKSVSKFS--------LQWFIQKVQDRIILNKLRHLAVK 297

Query: 493 DANKSRHSFEYSDRDETVIAHTLGGIDAFIKLPHYWPIVNSILKLTSLKCQNNRKKKLSL 314
           DANKSR+S EY D+DET++AH   GIDAFIKL H WPI +S LKL S+K  +  K+    
Sbjct: 298 DANKSRYSLEYLDKDETIVAHMFRGIDAFIKLSHGWPIFDSPLKLISIKGSDILKRSPLS 357

Query: 313 SSCQVEELLSSMDVQAQQNLLNFVDAIEELLAKRI 209
             C+V+ L +S+D+  +QN+ +FVDA+E++L +++
Sbjct: 358 FHCKVKNLANSLDIHIRQNISSFVDAVEKVLIEQL 392


>ref|NP_001242634.1| uncharacterized protein LOC100785081 [Glycine max]
           gi|255644993|gb|ACU22996.1| unknown [Glycine max]
          Length = 389

 Score =  155 bits (391), Expect = 9e-36
 Identities = 76/155 (49%), Positives = 111/155 (71%)
 Frame = -2

Query: 673 LELKNVEIFPDDIFMDEIIKAAKSSRKFCSSLPLQGVLQWLVQKVQDRIILCTLRRLIVK 494
           + LKNV++FP+DI++++I+  AK        L  +  LQW +QKVQDRIIL TLR L+VK
Sbjct: 232 MRLKNVQVFPNDIYVNDIVDTAK--------LVSKSSLQWFIQKVQDRIILSTLRHLVVK 283

Query: 493 DANKSRHSFEYSDRDETVIAHTLGGIDAFIKLPHYWPIVNSILKLTSLKCQNNRKKKLSL 314
           DANKSR+S EY D+D+T++AH  GGIDA+IKL H WPI  S LKL  +K  ++ K+    
Sbjct: 284 DANKSRYSLEYLDKDKTIVAHMPGGIDAYIKLSHGWPIFGSPLKLICIKGSDDLKRTSLS 343

Query: 313 SSCQVEELLSSMDVQAQQNLLNFVDAIEELLAKRI 209
             C+VE+L +S+D   +QN+ +FVDA+E++L +++
Sbjct: 344 FHCKVEKLANSLDTHIRQNISSFVDAVEKVLMEQL 378


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