BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005452
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane prot...   198   4e-49
ref|XP_002526954.1| protein with unknown function [Ricinus commu...   194   5e-48
ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-47
ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane prot...   190   1e-46
ref|NP_566205.1| ku70-binding-like protein [Arabidopsis thaliana...   186   2e-45

>ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane protease ATP23-like
           [Cucumis sativus] gi|449483813|ref|XP_004156699.1|
           PREDICTED: mitochondrial inner membrane protease
           ATP23-like [Cucumis sativus]
          Length = 195

 Score =  198 bits (503), Expect = 4e-49
 Identities = 91/128 (71%), Positives = 108/128 (84%), Gaps = 3/128 (2%)
 Frame = -1

Query: 376 MEEEAT---GSESFFSNANRGKTIEECQEMIQTSFTIPMVKFLREHLDKSGCYMGNNFIK 206
           M EE+T   GS   +S+ N G+T EEC++MI+ S   PMVKFL EHL+KSGC +G+ FIK
Sbjct: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60

Query: 205 AVNCEKEVAGGYVRGKGIIVCSNHMNIQDEVNQVVIHELIHAYDDCRAKNLDWTNCAHHA 26
           AV+CEK+++GGYVRG+GI+VCSNHMNIQDEVNQVVIHELIHA+DDCRA NLDW NC HHA
Sbjct: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120

Query: 25  CSEIRAGH 2
           CSEIRAGH
Sbjct: 121 CSEIRAGH 128


>ref|XP_002526954.1| protein with unknown function [Ricinus communis]
           gi|223533706|gb|EEF35441.1| protein with unknown
           function [Ricinus communis]
          Length = 187

 Score =  194 bits (494), Expect = 5e-48
 Identities = 86/108 (79%), Positives = 98/108 (90%)
 Frame = -1

Query: 325 GKTIEECQEMIQTSFTIPMVKFLREHLDKSGCYMGNNFIKAVNCEKEVAGGYVRGKGIIV 146
           G+TIEECQ+MI+ S   PMVKFLREHL+K+GC +G+NFIKAVNCEK+++GGYV G GI+V
Sbjct: 13  GRTIEECQDMIRKSLRTPMVKFLREHLEKAGCGIGDNFIKAVNCEKKMSGGYVSGDGIVV 72

Query: 145 CSNHMNIQDEVNQVVIHELIHAYDDCRAKNLDWTNCAHHACSEIRAGH 2
           CSNHMN+QDEVNQVVIHELIHAYDDCRA NLDW NC HHACSEIRAGH
Sbjct: 73  CSNHMNMQDEVNQVVIHELIHAYDDCRAANLDWANCVHHACSEIRAGH 120


>ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|222847326|gb|EEE84873.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  192 bits (487), Expect = 3e-47
 Identities = 83/108 (76%), Positives = 98/108 (90%)
 Frame = -1

Query: 325 GKTIEECQEMIQTSFTIPMVKFLREHLDKSGCYMGNNFIKAVNCEKEVAGGYVRGKGIIV 146
           G T+EEC+ MI+ SF  PMVKFLREH++K+GC +G NF+KAVNC+K++AGGYVRG+GI+V
Sbjct: 13  GTTVEECKNMIRRSFRTPMVKFLREHMEKAGCGVGENFLKAVNCDKKIAGGYVRGEGIMV 72

Query: 145 CSNHMNIQDEVNQVVIHELIHAYDDCRAKNLDWTNCAHHACSEIRAGH 2
           CSNHMN QD+VNQVVIHELIHAYDDCRA NLDW +CAHHACSEIRAGH
Sbjct: 73  CSNHMNTQDDVNQVVIHELIHAYDDCRAANLDWADCAHHACSEIRAGH 120


>ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane protease ATP23 [Vitis
           vinifera] gi|296081332|emb|CBI17714.3| unnamed protein
           product [Vitis vinifera]
          Length = 195

 Score =  190 bits (482), Expect = 1e-46
 Identities = 84/113 (74%), Positives = 98/113 (86%)
 Frame = -1

Query: 340 SNANRGKTIEECQEMIQTSFTIPMVKFLREHLDKSGCYMGNNFIKAVNCEKEVAGGYVRG 161
           S  N G T++EC++MIQ S   PMVKFLRE+L+KSGC +G+ FIKA+ C  +V+GGY RG
Sbjct: 16  SGVNGGMTVKECEQMIQKSLRTPMVKFLRENLEKSGCAIGDKFIKAIYCNTKVSGGYARG 75

Query: 160 KGIIVCSNHMNIQDEVNQVVIHELIHAYDDCRAKNLDWTNCAHHACSEIRAGH 2
           +GI+VCSNHMNIQDEVNQVVIHELIHAYDDCRA NLDWTNCAHHACSEIR+GH
Sbjct: 76  EGIVVCSNHMNIQDEVNQVVIHELIHAYDDCRAANLDWTNCAHHACSEIRSGH 128


>ref|NP_566205.1| ku70-binding-like protein [Arabidopsis thaliana]
           gi|6017109|gb|AAF01592.1|AC009895_13 hypothetical
           protein [Arabidopsis thaliana]
           gi|13877935|gb|AAK44045.1|AF370230_1 unknown protein
           [Arabidopsis thaliana] gi|16323466|gb|AAL15227.1|
           unknown protein [Arabidopsis thaliana]
           gi|332640421|gb|AEE73942.1| ku70-binding-like protein
           [Arabidopsis thaliana]
          Length = 194

 Score =  186 bits (472), Expect = 2e-45
 Identities = 89/128 (69%), Positives = 106/128 (82%), Gaps = 3/128 (2%)
 Frame = -1

Query: 376 MEEEA---TGSESFFSNANRGKTIEECQEMIQTSFTIPMVKFLREHLDKSGCYMGNNFIK 206
           ME+ A   +GSE F   A RGK+I+ECQ+MI+ SF  P+VKFL E ++KSGC +G+NF+K
Sbjct: 1   MEDAAAPNSGSE-FNPGARRGKSIDECQDMIRRSFRNPIVKFLMEQMEKSGCRVGDNFVK 59

Query: 205 AVNCEKEVAGGYVRGKGIIVCSNHMNIQDEVNQVVIHELIHAYDDCRAKNLDWTNCAHHA 26
           AV C   VAGGY +G+GI VCSN++ IQDEVNQVVIHELIHAYD+CRAKNLDWTNCAHHA
Sbjct: 60  AVVCTGPVAGGYTKGRGITVCSNYLTIQDEVNQVVIHELIHAYDECRAKNLDWTNCAHHA 119

Query: 25  CSEIRAGH 2
           CSEIRAGH
Sbjct: 120 CSEIRAGH 127