BLASTX nr result

ID: Coptis25_contig00005442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005442
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-conta...   112   2e-23
ref|XP_002522162.1| conserved hypothetical protein [Ricinus comm...   104   7e-21
ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228...   102   2e-20
ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-conta...   102   2e-20
ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20

>ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-containing protein 2 isoform
           1 [Vitis vinifera] gi|297741648|emb|CBI32780.3| unnamed
           protein product [Vitis vinifera]
          Length = 294

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/66 (77%), Positives = 61/66 (92%)
 Frame = -2

Query: 202 IGSNKYSAFILFSVVVSSLFEAVALAFFKDPSLNMLASGPYGLIFSSFVPFYFDIPISTR 23
           IGSNKYS FI+FS++VS LFE +AL+ FK+P+LN+L SGPYGLIFSSFVPFYFDIPISTR
Sbjct: 83  IGSNKYSVFIMFSIIVSLLFEILALSLFKEPTLNLLTSGPYGLIFSSFVPFYFDIPISTR 142

Query: 22  FRIFGI 5
           +R+FGI
Sbjct: 143 YRVFGI 148


>ref|XP_002522162.1| conserved hypothetical protein [Ricinus communis]
           gi|223538600|gb|EEF40203.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 289

 Score =  104 bits (260), Expect = 7e-21
 Identities = 45/66 (68%), Positives = 57/66 (86%)
 Frame = -2

Query: 202 IGSNKYSAFILFSVVVSSLFEAVALAFFKDPSLNMLASGPYGLIFSSFVPFYFDIPISTR 23
           IGSNKYS FILFS+ +S +FE +AL   KDP+ N+L SGPYG+IF+SFVPF+FDIP+STR
Sbjct: 81  IGSNKYSVFILFSIAISLVFEVLALGLLKDPTANLLTSGPYGVIFASFVPFFFDIPVSTR 140

Query: 22  FRIFGI 5
           FR+FG+
Sbjct: 141 FRVFGV 146


>ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228515 [Cucumis sativus]
          Length = 291

 Score =  102 bits (255), Expect = 2e-20
 Identities = 44/66 (66%), Positives = 57/66 (86%)
 Frame = -2

Query: 202 IGSNKYSAFILFSVVVSSLFEAVALAFFKDPSLNMLASGPYGLIFSSFVPFYFDIPISTR 23
           IGSNKYS FILFS+  S LFE +A++  KDP+ N++ SGPYGL+F+SFVPF+FDIP+STR
Sbjct: 83  IGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTSGPYGLLFASFVPFFFDIPVSTR 142

Query: 22  FRIFGI 5
           FR+FG+
Sbjct: 143 FRVFGV 148


>ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-containing protein 2-like
           [Cucumis sativus]
          Length = 291

 Score =  102 bits (255), Expect = 2e-20
 Identities = 44/66 (66%), Positives = 57/66 (86%)
 Frame = -2

Query: 202 IGSNKYSAFILFSVVVSSLFEAVALAFFKDPSLNMLASGPYGLIFSSFVPFYFDIPISTR 23
           IGSNKYS FILFS+  S LFE +A++  KDP+ N++ SGPYGL+F+SFVPF+FDIP+STR
Sbjct: 83  IGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTSGPYGLLFASFVPFFFDIPVSTR 142

Query: 22  FRIFGI 5
           FR+FG+
Sbjct: 143 FRVFGV 148


>ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|222853957|gb|EEE91504.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/67 (68%), Positives = 56/67 (83%)
 Frame = -2

Query: 202 IGSNKYSAFILFSVVVSSLFEAVALAFFKDPSLNMLASGPYGLIFSSFVPFYFDIPISTR 23
           IGSNKYS FILFSV+VS LFE  A+   +DP  N+L SGPYGLIF+S+VPFYFDIP+STR
Sbjct: 83  IGSNKYSVFILFSVIVSLLFEVFAVTLLQDPLANLLTSGPYGLIFASYVPFYFDIPVSTR 142

Query: 22  FRIFGIN 2
           FR+ G++
Sbjct: 143 FRVVGVH 149


Top