BLASTX nr result

ID: Coptis25_contig00005441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005441
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134353.1| PREDICTED: brefeldin A-inhibited guanine nuc...    68   7e-10
ref|XP_003609924.1| Brefeldin A-inhibited guanine nucleotide-exc...    68   9e-10
ref|XP_002516179.1| guanine nucleotide-exchange, putative [Ricin...    65   4e-09
emb|CAN73925.1| hypothetical protein VITISV_005807 [Vitis vinifera]    65   4e-09
ref|XP_003633087.1| PREDICTED: brefeldin A-inhibited guanine nuc...    64   1e-08

>ref|XP_004134353.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein
            1-like [Cucumis sativus] gi|449480318|ref|XP_004155860.1|
            PREDICTED: brefeldin A-inhibited guanine
            nucleotide-exchange protein 1-like [Cucumis sativus]
          Length = 1783

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/61 (54%), Positives = 43/61 (70%)
 Frame = -1

Query: 202  GVPSPSGQGQKTAQAGYLQRTQTLGQRIMGNMMDNLLVRXXXXXXXXXXSDALVPSSPVK 23
            G+PSPS +  + A+A  LQR+QT+GQRIMGNMMDN+ VR          SDA VPSSP++
Sbjct: 1475 GIPSPSTRATRAAEAANLQRSQTIGQRIMGNMMDNIFVRSLTSKSKGRASDASVPSSPIR 1534

Query: 22   V 20
            +
Sbjct: 1535 L 1535


>ref|XP_003609924.1| Brefeldin A-inhibited guanine nucleotide-exchange protein [Medicago
            truncatula] gi|355510979|gb|AES92121.1| Brefeldin
            A-inhibited guanine nucleotide-exchange protein [Medicago
            truncatula]
          Length = 1937

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/61 (55%), Positives = 41/61 (67%)
 Frame = -1

Query: 202  GVPSPSGQGQKTAQAGYLQRTQTLGQRIMGNMMDNLLVRXXXXXXXXXXSDALVPSSPVK 23
            G+PSPSG+  K A  G LQR+QTLGQRIMGNMM+N+ +R           DA  PSSPV+
Sbjct: 1632 GLPSPSGRTPKAADGGGLQRSQTLGQRIMGNMMENIFLRNLTSKSKSPIPDASQPSSPVR 1691

Query: 22   V 20
            V
Sbjct: 1692 V 1692


>ref|XP_002516179.1| guanine nucleotide-exchange, putative [Ricinus communis]
            gi|223544665|gb|EEF46181.1| guanine nucleotide-exchange,
            putative [Ricinus communis]
          Length = 1714

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/61 (57%), Positives = 42/61 (68%)
 Frame = -1

Query: 202  GVPSPSGQGQKTAQAGYLQRTQTLGQRIMGNMMDNLLVRXXXXXXXXXXSDALVPSSPVK 23
            G+PSPSG+  K A    LQR+QT+GQ+IMGNMMDNL +R          SDA VPSSP+K
Sbjct: 1466 GLPSPSGKAHKPAD---LQRSQTIGQKIMGNMMDNLFLRSLTSKSKARASDASVPSSPIK 1522

Query: 22   V 20
            V
Sbjct: 1523 V 1523


>emb|CAN73925.1| hypothetical protein VITISV_005807 [Vitis vinifera]
          Length = 876

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/61 (57%), Positives = 41/61 (67%)
 Frame = -1

Query: 202 GVPSPSGQGQKTAQAGYLQRTQTLGQRIMGNMMDNLLVRXXXXXXXXXXSDALVPSSPVK 23
           G+PSPSG+ QK A+ G L R+QT+GQRIMGNMMDNL +R          SDA  P SP K
Sbjct: 772 GLPSPSGRAQKAAEVG-LHRSQTIGQRIMGNMMDNLFLRSLTSKSKSRVSDASAPPSPPK 830

Query: 22  V 20
           V
Sbjct: 831 V 831


>ref|XP_003633087.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein
            1-like [Vitis vinifera]
          Length = 1730

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/60 (56%), Positives = 40/60 (66%)
 Frame = -1

Query: 202  GVPSPSGQGQKTAQAGYLQRTQTLGQRIMGNMMDNLLVRXXXXXXXXXXSDALVPSSPVK 23
            G+PSPSG+ QK A+ G L R+QT+GQRIMGNMMDNL +R          SDA  P SP K
Sbjct: 1483 GLPSPSGRAQKAAEVG-LHRSQTIGQRIMGNMMDNLFLRSLTSKSKSRVSDASAPPSPPK 1541


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