BLASTX nr result

ID: Coptis25_contig00005435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005435
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633788.1| PREDICTED: uridine kinase-like protein 1, ch...   221   7e-56
ref|XP_003633787.1| PREDICTED: uridine kinase-like protein 1, ch...   221   7e-56
emb|CBI40048.3| unnamed protein product [Vitis vinifera]              221   7e-56
emb|CBI40047.3| unnamed protein product [Vitis vinifera]              221   7e-56
emb|CAN74540.1| hypothetical protein VITISV_035160 [Vitis vinifera]   221   7e-56

>ref|XP_003633788.1| PREDICTED: uridine kinase-like protein 1, chloroplastic-like
           isoform 2 [Vitis vinifera]
          Length = 481

 Score =  221 bits (563), Expect = 7e-56
 Identities = 108/110 (98%), Positives = 109/110 (99%)
 Frame = +3

Query: 3   IHREGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL 182
           IHR+GDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL
Sbjct: 372 IHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL 431

Query: 183 ISAPEGIHCVCKRFPSLKIVTSEIDAALNEEFRVIPGMGEFGDRYFGTDD 332
           ISAPEGIHCVCKRFPSLKIVTSEID ALNEEFRVIPGMGEFGDRYFGTDD
Sbjct: 432 ISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGMGEFGDRYFGTDD 481


>ref|XP_003633787.1| PREDICTED: uridine kinase-like protein 1, chloroplastic-like
           isoform 1 [Vitis vinifera]
          Length = 482

 Score =  221 bits (563), Expect = 7e-56
 Identities = 108/110 (98%), Positives = 109/110 (99%)
 Frame = +3

Query: 3   IHREGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL 182
           IHR+GDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL
Sbjct: 373 IHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL 432

Query: 183 ISAPEGIHCVCKRFPSLKIVTSEIDAALNEEFRVIPGMGEFGDRYFGTDD 332
           ISAPEGIHCVCKRFPSLKIVTSEID ALNEEFRVIPGMGEFGDRYFGTDD
Sbjct: 433 ISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGMGEFGDRYFGTDD 482


>emb|CBI40048.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score =  221 bits (563), Expect = 7e-56
 Identities = 108/110 (98%), Positives = 109/110 (99%)
 Frame = +3

Query: 3   IHREGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL 182
           IHR+GDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL
Sbjct: 158 IHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL 217

Query: 183 ISAPEGIHCVCKRFPSLKIVTSEIDAALNEEFRVIPGMGEFGDRYFGTDD 332
           ISAPEGIHCVCKRFPSLKIVTSEID ALNEEFRVIPGMGEFGDRYFGTDD
Sbjct: 218 ISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGMGEFGDRYFGTDD 267


>emb|CBI40047.3| unnamed protein product [Vitis vinifera]
          Length = 896

 Score =  221 bits (563), Expect = 7e-56
 Identities = 108/110 (98%), Positives = 109/110 (99%)
 Frame = +3

Query: 3    IHREGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL 182
            IHR+GDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL
Sbjct: 787  IHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL 846

Query: 183  ISAPEGIHCVCKRFPSLKIVTSEIDAALNEEFRVIPGMGEFGDRYFGTDD 332
            ISAPEGIHCVCKRFPSLKIVTSEID ALNEEFRVIPGMGEFGDRYFGTDD
Sbjct: 847  ISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGMGEFGDRYFGTDD 896


>emb|CAN74540.1| hypothetical protein VITISV_035160 [Vitis vinifera]
          Length = 139

 Score =  221 bits (563), Expect = 7e-56
 Identities = 108/110 (98%), Positives = 109/110 (99%)
 Frame = +3

Query: 3   IHREGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL 182
           IHR+GDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL
Sbjct: 30  IHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAIELLIQKGVPESHIIFLNL 89

Query: 183 ISAPEGIHCVCKRFPSLKIVTSEIDAALNEEFRVIPGMGEFGDRYFGTDD 332
           ISAPEGIHCVCKRFPSLKIVTSEID ALNEEFRVIPGMGEFGDRYFGTDD
Sbjct: 90  ISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGMGEFGDRYFGTDD 139


Top