BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005432
         (1085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18600.3| unnamed protein product [Vitis vinifera]              478   e-132
ref|XP_002269258.1| PREDICTED: nuclease S1 [Vitis vinifera]           478   e-132
ref|NP_680734.1| endonuclease 4 [Arabidopsis thaliana] gi|391359...   454   e-125
ref|XP_003608197.1| Nuclease S1 [Medicago truncatula] gi|3555092...   449   e-124
ref|XP_002869881.1| hypothetical protein ARALYDRAFT_492719 [Arab...   449   e-124

>emb|CBI18600.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  478 bits (1229), Expect = e-132
 Identities = 222/298 (74%), Positives = 253/298 (84%), Gaps = 1/298 (0%)
 Frame = +2

Query: 122  MIGSGFSFFGRVLILLQLFTGIRAWGKEGHYATCKIAEGLLTDDAASAVKLLLPEYAEGD 301
            M  SG     R L+LLQL  GI +WGKEGHYA CKIAEG L++DA  AVK LLP+YAEGD
Sbjct: 1    MAWSGVLLIVRALVLLQLIPGILSWGKEGHYAVCKIAEGFLSEDALGAVKALLPDYAEGD 60

Query: 302  LASVCSWPDEIKHNYHWHWSGPLHYVDTPDFNCNYEYCRDCHDSYRHKDRCVTAAIYNYS 481
            LA+VCSW DEI+HN+HW WSGPLHYVDTPD+ CNYEYCRDCHD   HKD CVT AIYNY+
Sbjct: 61   LAAVCSWADEIRHNFHWRWSGPLHYVDTPDYRCNYEYCRDCHDFRGHKDICVTGAIYNYT 120

Query: 482  MQLMT-FEDSISEQKYNLTEALLFLSHFIGDIHQPLHVGFTGDEGGNTITVRWYRRKTNL 658
             QL + + +S SE +YNLTEAL+FLSHFIGD+HQPLHVGFTGDEGGNTI VRWYRRKTNL
Sbjct: 121  KQLTSGYHNSGSEIRYNLTEALMFLSHFIGDVHQPLHVGFTGDEGGNTIIVRWYRRKTNL 180

Query: 659  HHVWDNMIIESAMKMFYNSDLAMMIEAIQRNITDNWSADISLWEKCSSTYKACPDPYASE 838
            HH+WDNMII+SA+K +YNSDLA+MI+AIQRNIT +WS DIS W+ C+S   ACP+ YASE
Sbjct: 181  HHIWDNMIIDSALKTYYNSDLAIMIQAIQRNITGDWSFDISSWKNCASDDTACPNLYASE 240

Query: 839  SIRLACKYAYRNATPGSTLTDDYFLSRLPTVERRLAQGGVRLAATLNRIFTTQPSISV 1012
            SI LACK+AYRNATPGSTL DDYFLSRLP VE+RLAQGG+RLAATLNRIF +QP IS+
Sbjct: 241  SISLACKFAYRNATPGSTLGDDYFLSRLPIVEKRLAQGGIRLAATLNRIFASQPKISL 298


>ref|XP_002269258.1| PREDICTED: nuclease S1 [Vitis vinifera]
          Length = 323

 Score =  478 bits (1229), Expect = e-132
 Identities = 222/298 (74%), Positives = 253/298 (84%), Gaps = 1/298 (0%)
 Frame = +2

Query: 122  MIGSGFSFFGRVLILLQLFTGIRAWGKEGHYATCKIAEGLLTDDAASAVKLLLPEYAEGD 301
            M  SG     R L+LLQL  GI +WGKEGHYA CKIAEG L++DA  AVK LLP+YAEGD
Sbjct: 1    MAWSGVLLIVRALVLLQLIPGILSWGKEGHYAVCKIAEGFLSEDALGAVKALLPDYAEGD 60

Query: 302  LASVCSWPDEIKHNYHWHWSGPLHYVDTPDFNCNYEYCRDCHDSYRHKDRCVTAAIYNYS 481
            LA+VCSW DEI+HN+HW WSGPLHYVDTPD+ CNYEYCRDCHD   HKD CVT AIYNY+
Sbjct: 61   LAAVCSWADEIRHNFHWRWSGPLHYVDTPDYRCNYEYCRDCHDFRGHKDICVTGAIYNYT 120

Query: 482  MQLMT-FEDSISEQKYNLTEALLFLSHFIGDIHQPLHVGFTGDEGGNTITVRWYRRKTNL 658
             QL + + +S SE +YNLTEAL+FLSHFIGD+HQPLHVGFTGDEGGNTI VRWYRRKTNL
Sbjct: 121  KQLTSGYHNSGSEIRYNLTEALMFLSHFIGDVHQPLHVGFTGDEGGNTIIVRWYRRKTNL 180

Query: 659  HHVWDNMIIESAMKMFYNSDLAMMIEAIQRNITDNWSADISLWEKCSSTYKACPDPYASE 838
            HH+WDNMII+SA+K +YNSDLA+MI+AIQRNIT +WS DIS W+ C+S   ACP+ YASE
Sbjct: 181  HHIWDNMIIDSALKTYYNSDLAIMIQAIQRNITGDWSFDISSWKNCASDDTACPNLYASE 240

Query: 839  SIRLACKYAYRNATPGSTLTDDYFLSRLPTVERRLAQGGVRLAATLNRIFTTQPSISV 1012
            SI LACK+AYRNATPGSTL DDYFLSRLP VE+RLAQGG+RLAATLNRIF +QP IS+
Sbjct: 241  SISLACKFAYRNATPGSTLGDDYFLSRLPIVEKRLAQGGIRLAATLNRIFASQPKISL 298


>ref|NP_680734.1| endonuclease 4 [Arabidopsis thaliana]
            gi|391359266|sp|F4JJL0.1|ENDO4_ARATH RecName:
            Full=Endonuclease 4; Short=AtENDO4; AltName:
            Full=Deoxyribonuclease ENDO4; AltName:
            Full=Single-stranded-nucleate endonuclease ENDO4; Flags:
            Precursor gi|332659076|gb|AEE84476.1| endonuclease 4
            [Arabidopsis thaliana]
          Length = 299

 Score =  454 bits (1168), Expect = e-125
 Identities = 205/287 (71%), Positives = 242/287 (84%), Gaps = 1/287 (0%)
 Frame = +2

Query: 143  FFGRVLILLQLFTGIRAWGKEGHYATCKIAEGLLTDDAASAVKLLLPEYAEGDLASVCSW 322
            +F RVL+L QL  G   WGKEGHY  CKIAE    ++  +AVK LLP+ A+GDLASVCSW
Sbjct: 8    WFARVLVLTQLINGALCWGKEGHYTVCKIAESYFEEETVAAVKKLLPKSADGDLASVCSW 67

Query: 323  PDEIKHNYHWHWSGPLHYVDTPDFNCNYEYCRDCHDSYRHKDRCVTAAIYNYSMQLMTF- 499
            PDEIKH++ W W+ PLHYVDTPD+ CNYEYCRDCHD+++++DRCVT AI+NY+MQLM+  
Sbjct: 68   PDEIKHHWQWRWTSPLHYVDTPDYRCNYEYCRDCHDTHKNQDRCVTGAIFNYTMQLMSAS 127

Query: 500  EDSISEQKYNLTEALLFLSHFIGDIHQPLHVGFTGDEGGNTITVRWYRRKTNLHHVWDNM 679
            E+S +   YNLTEAL+FLSHFIGDIHQPLHVGF GDEGGNTITVRWYRRKTNLHHVWDNM
Sbjct: 128  ENSDTIVHYNLTEALMFLSHFIGDIHQPLHVGFLGDEGGNTITVRWYRRKTNLHHVWDNM 187

Query: 680  IIESAMKMFYNSDLAMMIEAIQRNITDNWSADISLWEKCSSTYKACPDPYASESIRLACK 859
            IIESA+K +YN  L +MIEA+Q N+T++WS D+ LWE C     ACP+PYASESI LACK
Sbjct: 188  IIESALKTYYNKSLPLMIEALQANLTNDWSNDVPLWESCQLNQTACPNPYASESINLACK 247

Query: 860  YAYRNATPGSTLTDDYFLSRLPTVERRLAQGGVRLAATLNRIFTTQP 1000
            YAYRNATPG+TL DDYFLSRLP VE+RLAQGG+RLAATLNRIF+++P
Sbjct: 248  YAYRNATPGTTLGDDYFLSRLPIVEKRLAQGGIRLAATLNRIFSSKP 294


>ref|XP_003608197.1| Nuclease S1 [Medicago truncatula] gi|355509252|gb|AES90394.1|
            Nuclease S1 [Medicago truncatula]
          Length = 383

 Score =  449 bits (1156), Expect = e-124
 Identities = 207/287 (72%), Positives = 240/287 (83%), Gaps = 1/287 (0%)
 Frame = +2

Query: 158  LILLQLFTGIRAWGKEGHYATCKIAEGLLTDDAASAVKLLLPEYAEGDLASVCSWPDEIK 337
            L+L      + AWGK+GHYA CKI++  L++DA  AVK LLP+ A+ DLASVCSWPDEI+
Sbjct: 97   LLLSLALPNVLAWGKDGHYAICKISQEYLSEDALFAVKQLLPDSAQADLASVCSWPDEIR 156

Query: 338  HNYHWHWSGPLHYVDTPDFNCNYEYCRDCHDSYRHKDRCVTAAIYNYSMQL-MTFEDSIS 514
            HNYH+ WS PLHY+DTPDF CNY+YCRDCHDSY HK RCVT AIYNY+MQL +   D+ S
Sbjct: 157  HNYHYRWSSPLHYIDTPDFKCNYQYCRDCHDSYGHKHRCVTGAIYNYTMQLKLANADASS 216

Query: 515  EQKYNLTEALLFLSHFIGDIHQPLHVGFTGDEGGNTITVRWYRRKTNLHHVWDNMIIESA 694
            E KYNLTEAL+FLSHF+GD+HQPLHVGFTGD GGN+ITVRWYRRKTNLHHVWDNMIIESA
Sbjct: 217  ELKYNLTEALMFLSHFVGDVHQPLHVGFTGDLGGNSITVRWYRRKTNLHHVWDNMIIESA 276

Query: 695  MKMFYNSDLAMMIEAIQRNITDNWSADISLWEKCSSTYKACPDPYASESIRLACKYAYRN 874
            +K FY SDL+ MI+AIQRNI+D WS D+S+WE C+  + ACPD YASESI LACK+AY+N
Sbjct: 277  LKKFYGSDLSTMIQAIQRNISDIWSNDVSIWEHCAHNHTACPDRYASESISLACKFAYKN 336

Query: 875  ATPGSTLTDDYFLSRLPTVERRLAQGGVRLAATLNRIFTTQPSISVA 1015
            ATPGSTL DDYFLSRLP VE+RLAQGGVRLAA LN IFT +  I+ A
Sbjct: 337  ATPGSTLEDDYFLSRLPIVEKRLAQGGVRLAAILNHIFTPKTRIAQA 383


>ref|XP_002869881.1| hypothetical protein ARALYDRAFT_492719 [Arabidopsis lyrata subsp.
            lyrata] gi|297315717|gb|EFH46140.1| hypothetical protein
            ARALYDRAFT_492719 [Arabidopsis lyrata subsp. lyrata]
          Length = 299

 Score =  449 bits (1156), Expect = e-124
 Identities = 203/287 (70%), Positives = 237/287 (82%), Gaps = 1/287 (0%)
 Frame = +2

Query: 143  FFGRVLILLQLFTGIRAWGKEGHYATCKIAEGLLTDDAASAVKLLLPEYAEGDLASVCSW 322
            +F  VL+L QL  G   WGKEGHY  CKIAE    ++  +AVK LLPE A+GDLASVCSW
Sbjct: 8    WFATVLVLTQLINGALCWGKEGHYTVCKIAESYFEEETVAAVKKLLPESADGDLASVCSW 67

Query: 323  PDEIKHNYHWHWSGPLHYVDTPDFNCNYEYCRDCHDSYRHKDRCVTAAIYNYSMQLMTF- 499
            PDEIKH++ W W+ PLHYVDTPD+ CNYEYCRDCHD+++H+DRCVT AI+NY+MQLM+  
Sbjct: 68   PDEIKHHWQWRWTSPLHYVDTPDYRCNYEYCRDCHDTHKHQDRCVTGAIFNYTMQLMSAS 127

Query: 500  EDSISEQKYNLTEALLFLSHFIGDIHQPLHVGFTGDEGGNTITVRWYRRKTNLHHVWDNM 679
            E+S +   YNLTEAL+FLSHFIGDIHQPLHVGF GDEGGNTITVRWYRRKTNLHHVWDNM
Sbjct: 128  ENSHTIVHYNLTEALMFLSHFIGDIHQPLHVGFLGDEGGNTITVRWYRRKTNLHHVWDNM 187

Query: 680  IIESAMKMFYNSDLAMMIEAIQRNITDNWSADISLWEKCSSTYKACPDPYASESIRLACK 859
            IIESA+K +YN  L + I+A+Q N+T  WS D+  WE C     ACP+PYASESI LACK
Sbjct: 188  IIESALKTYYNKSLPLFIQALQTNLTHGWSNDVPSWESCQLNQTACPNPYASESINLACK 247

Query: 860  YAYRNATPGSTLTDDYFLSRLPTVERRLAQGGVRLAATLNRIFTTQP 1000
            YAYRNATPG+TL DDYFLSRLP VE+RLAQGG+RLAATLNRIF+++P
Sbjct: 248  YAYRNATPGTTLGDDYFLSRLPIVEKRLAQGGIRLAATLNRIFSSKP 294