BLASTX nr result

ID: Coptis25_contig00005431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005431
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269205.1| PREDICTED: nuclease S1 [Vitis vinifera]           455   e-126
emb|CBI18599.3| unnamed protein product [Vitis vinifera]              440   e-121
gb|AAC34856.1| senescence-associated protein 6 [Hemerocallis hyb...   420   e-115
gb|AAT79582.1| endonuclease [Solanum tuberosum]                       412   e-113
emb|CAP39915.1| putative pre-endonuclease [Humulus lupulus]           411   e-112

>ref|XP_002269205.1| PREDICTED: nuclease S1 [Vitis vinifera]
          Length = 307

 Score =  455 bits (1171), Expect = e-126
 Identities = 204/262 (77%), Positives = 231/262 (88%)
 Frame = -2

Query: 889 GGSLKLSMRAIALLVCFSLILAPRAQAWSKEGHIMTCRIAQALLKPHAAEVVHNLLPDYA 710
           GG  +LS     LLV F+ ++AP A AWSKEGHIMTC+IAQALL+P AAE V NLLPDY 
Sbjct: 5   GGLFRLSRSGFGLLVVFTFVMAPGALAWSKEGHIMTCQIAQALLEPEAAEAVRNLLPDYV 64

Query: 709 DGDLSSLCTWPDQIRHWYKYQWTSSLHFIDTPDKACTFDYSRDCHDSHGRKDMCVAGAIR 530
           +GDLS+LCTWPDQIRHWYKY+WTSSLHFIDTPD+ACTFDYSRDCHD HG +DMCVAGAI+
Sbjct: 65  NGDLSALCTWPDQIRHWYKYRWTSSLHFIDTPDEACTFDYSRDCHDPHGLQDMCVAGAIK 124

Query: 529 NFTSQLSHYKEGSSDRRHNMTEALLFLSHFMGDLHQPLHVGFTSDEGGNTIQLRWFKHKS 350
           NFTSQLSHY EGSSDRR+N+TEALLFLSHFMGD+HQPLHVGFTSDEGGNTI+L WF+HKS
Sbjct: 125 NFTSQLSHYGEGSSDRRYNLTEALLFLSHFMGDIHQPLHVGFTSDEGGNTIELHWFRHKS 184

Query: 349 NLHHVWDREIIQTAAAELFGKDMDLFQEDIQNNLTHGVWSDDMSSWEDCNDLLSCPNKYA 170
           NLHHVWDREII TAAA+ + KDMDL  EDI+ N T GVW+DD+SSW++CNDLL+CPNKYA
Sbjct: 185 NLHHVWDREIILTAAADFYTKDMDLLLEDIKGNFTDGVWADDVSSWKECNDLLTCPNKYA 244

Query: 169 VESISLACKWGYKGVSPGQTLS 104
            ESIS+ACKWGYKG  PG TL+
Sbjct: 245 SESISIACKWGYKGAKPGSTLA 266


>emb|CBI18599.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score =  440 bits (1132), Expect = e-121
 Identities = 196/242 (80%), Positives = 220/242 (90%)
 Frame = -2

Query: 829 LAPRAQAWSKEGHIMTCRIAQALLKPHAAEVVHNLLPDYADGDLSSLCTWPDQIRHWYKY 650
           +AP A AWSKEGHIMTC+IAQALL+P AAE V NLLPDY +GDLS+LCTWPDQIRHWYKY
Sbjct: 1   MAPGALAWSKEGHIMTCQIAQALLEPEAAEAVRNLLPDYVNGDLSALCTWPDQIRHWYKY 60

Query: 649 QWTSSLHFIDTPDKACTFDYSRDCHDSHGRKDMCVAGAIRNFTSQLSHYKEGSSDRRHNM 470
           +WTSSLHFIDTPD+ACTFDYSRDCHD HG +DMCVAGAI+NFTSQLSHY EGSSDRR+N+
Sbjct: 61  RWTSSLHFIDTPDEACTFDYSRDCHDPHGLQDMCVAGAIKNFTSQLSHYGEGSSDRRYNL 120

Query: 469 TEALLFLSHFMGDLHQPLHVGFTSDEGGNTIQLRWFKHKSNLHHVWDREIIQTAAAELFG 290
           TEALLFLSHFMGD+HQPLHVGFTSDEGGNTI+L WF+HKSNLHHVWDREII TAAA+ + 
Sbjct: 121 TEALLFLSHFMGDIHQPLHVGFTSDEGGNTIELHWFRHKSNLHHVWDREIILTAAADFYT 180

Query: 289 KDMDLFQEDIQNNLTHGVWSDDMSSWEDCNDLLSCPNKYAVESISLACKWGYKGVSPGQT 110
           KDMDL  EDI+ N T GVW+DD+SSW++CNDLL+CPNKYA ESIS+ACKWGYKG  PG T
Sbjct: 181 KDMDLLLEDIKGNFTDGVWADDVSSWKECNDLLTCPNKYASESISIACKWGYKGAKPGST 240

Query: 109 LS 104
           L+
Sbjct: 241 LA 242


>gb|AAC34856.1| senescence-associated protein 6 [Hemerocallis hybrid cultivar]
          Length = 298

 Score =  420 bits (1079), Expect = e-115
 Identities = 183/244 (75%), Positives = 214/244 (87%)
 Frame = -2

Query: 835 LILAPRAQAWSKEGHIMTCRIAQALLKPHAAEVVHNLLPDYADGDLSSLCTWPDQIRHWY 656
           L+  P A  WSKEGHI+TCRIAQ LL+P AAE V NLLP Y DGDLS+LCTWPDQIRHWY
Sbjct: 14  LVSLPGAWPWSKEGHIVTCRIAQDLLEPEAAETVRNLLPHYVDGDLSALCTWPDQIRHWY 73

Query: 655 KYQWTSSLHFIDTPDKACTFDYSRDCHDSHGRKDMCVAGAIRNFTSQLSHYKEGSSDRRH 476
           KY+W+S LHFIDTPD AC+FDYSRDCHD  G +DMCVAGA+ N+T+QL HY++G+SDRR+
Sbjct: 74  KYRWSSPLHFIDTPDDACSFDYSRDCHDPKGAEDMCVAGAVHNYTTQLMHYRDGTSDRRY 133

Query: 475 NMTEALLFLSHFMGDLHQPLHVGFTSDEGGNTIQLRWFKHKSNLHHVWDREIIQTAAAEL 296
           N+TE+LLFLSHFMGD+HQP+HVGFTSDEGGNTI LRWF+HKSNLHHVWDREII TA A+ 
Sbjct: 134 NLTESLLFLSHFMGDIHQPMHVGFTSDEGGNTINLRWFRHKSNLHHVWDREIILTALADY 193

Query: 295 FGKDMDLFQEDIQNNLTHGVWSDDMSSWEDCNDLLSCPNKYAVESISLACKWGYKGVSPG 116
           +GKD+D FQ+D+QNN T G+WSDD SSW +C+DL SCP K+A ESISLACKWGYKGV+PG
Sbjct: 194 YGKDLDAFQQDLQNNFTTGIWSDDTSSWGECDDLFSCPKKWASESISLACKWGYKGVTPG 253

Query: 115 QTLS 104
           +TLS
Sbjct: 254 ETLS 257


>gb|AAT79582.1| endonuclease [Solanum tuberosum]
          Length = 302

 Score =  412 bits (1058), Expect = e-113
 Identities = 179/259 (69%), Positives = 217/259 (83%)
 Frame = -2

Query: 880 LKLSMRAIALLVCFSLILAPRAQAWSKEGHIMTCRIAQALLKPHAAEVVHNLLPDYADGD 701
           L+L++ +I   +C + I    A+AWSKEGH+MTCRIAQ LL   AA  V  LLP+Y +GD
Sbjct: 2   LRLTLLSIIFFLCLAFINHHGAEAWSKEGHMMTCRIAQGLLNDEAAHAVKMLLPEYVNGD 61

Query: 700 LSSLCTWPDQIRHWYKYQWTSSLHFIDTPDKACTFDYSRDCHDSHGRKDMCVAGAIRNFT 521
           LS+LC WPDQ+RHWYKY+WTS LHFIDTPDKAC FDY RDCHD HG KDMCVAGAI+NFT
Sbjct: 62  LSALCVWPDQVRHWYKYKWTSPLHFIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNFT 121

Query: 520 SQLSHYKEGSSDRRHNMTEALLFLSHFMGDLHQPLHVGFTSDEGGNTIQLRWFKHKSNLH 341
           +QLSHY+EG+SDRR+NMTEALLFLSHFMGD+HQP+HVGFTSD GGN+I LRWF+HKSNLH
Sbjct: 122 TQLSHYREGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNLH 181

Query: 340 HVWDREIIQTAAAELFGKDMDLFQEDIQNNLTHGVWSDDMSSWEDCNDLLSCPNKYAVES 161
           HVWDREII TAA + + KD++L +EDI+ N T G+WSDD++SW +C ++ SC NK+A ES
Sbjct: 182 HVWDREIILTAAKDYYAKDVNLLEEDIEGNFTDGIWSDDLASWRECGNVFSCVNKFATES 241

Query: 160 ISLACKWGYKGVSPGQTLS 104
           I++ACKWGYKGV  G+TLS
Sbjct: 242 INIACKWGYKGVEAGETLS 260


>emb|CAP39915.1| putative pre-endonuclease [Humulus lupulus]
          Length = 300

 Score =  411 bits (1056), Expect = e-112
 Identities = 182/252 (72%), Positives = 214/252 (84%)
 Frame = -2

Query: 859 IALLVCFSLILAPRAQAWSKEGHIMTCRIAQALLKPHAAEVVHNLLPDYADGDLSSLCTW 680
           + L++  + I  P A  WSKEGH MTC+IAQALL   AAE V NLLPDY +GDLS+LC W
Sbjct: 8   LVLVLALASITVPSAHGWSKEGHTMTCQIAQALLDSEAAEAVRNLLPDYVNGDLSALCVW 67

Query: 679 PDQIRHWYKYQWTSSLHFIDTPDKACTFDYSRDCHDSHGRKDMCVAGAIRNFTSQLSHYK 500
           PDQ+RHWY+Y+WTS LHFIDTPD+AC+FDYSRDCHD HG ++MCVAGAI+NFTSQLSHY+
Sbjct: 68  PDQVRHWYRYRWTSPLHFIDTPDQACSFDYSRDCHDQHGLENMCVAGAIQNFTSQLSHYR 127

Query: 499 EGSSDRRHNMTEALLFLSHFMGDLHQPLHVGFTSDEGGNTIQLRWFKHKSNLHHVWDREI 320
           EG+SDRR+NMTEALLFLSHFMGD+HQPLHVGFT+DEGGNTI LRWF+HKSNLHHVWDREI
Sbjct: 128 EGTSDRRYNMTEALLFLSHFMGDIHQPLHVGFTTDEGGNTINLRWFRHKSNLHHVWDREI 187

Query: 319 IQTAAAELFGKDMDLFQEDIQNNLTHGVWSDDMSSWEDCNDLLSCPNKYAVESISLACKW 140
           I TA  + + K+ DL  +DI+ N T GVWSDD+SSWE C+DL SC NK+AVESI++ACKW
Sbjct: 188 ILTALKDYYEKNTDLLLQDIKGNYTDGVWSDDVSSWEHCDDLASCINKFAVESINIACKW 247

Query: 139 GYKGVSPGQTLS 104
           GYK V PG TL+
Sbjct: 248 GYKDVEPGVTLA 259


Top