BLASTX nr result

ID: Coptis25_contig00005428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005428
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321500.1| predicted protein [Populus trichocarpa] gi|2...   167   3e-39
ref|XP_002265108.2| PREDICTED: uncharacterized protein LOC100252...   166   9e-39
ref|XP_003612947.1| Glycine-rich protein [Medicago truncatula] g...   157   2e-36
emb|CBI25715.3| unnamed protein product [Vitis vinifera]              155   1e-35
ref|XP_004164454.1| PREDICTED: uncharacterized protein LOC101228...   150   3e-34

>ref|XP_002321500.1| predicted protein [Populus trichocarpa] gi|222868496|gb|EEF05627.1|
            predicted protein [Populus trichocarpa]
          Length = 789

 Score =  167 bits (423), Expect = 3e-39
 Identities = 105/263 (39%), Positives = 147/263 (55%), Gaps = 17/263 (6%)
 Frame = -2

Query: 880  KKEIIGIVGYSDETRVLAEFSERGWCLMDFNWSSQLQKKSRDDCHFFELRGNHMVL-LFP 704
            K+++ G++  + ET +LAEF    WCLMD  W  + +KKS +D H FEL G  MV+ LF 
Sbjct: 523  KQQVTGVMK-TGETCILAEFVGTRWCLMDSQWYLEPKKKSNEDGHLFELIGCRMVVKLFQ 581

Query: 703  GRKLDYEPKYCQTQKNEGDFMTAVEFSKSDPYGKAIALFNLKSGVLKVDEDWFALSAITL 524
            G+KLD+EPK+C+ ++++ DFMTAVEFS   PYGKA+AL +LKSG +KV E W  L AI  
Sbjct: 582  GKKLDFEPKHCEKKRSKQDFMTAVEFSAEYPYGKAVALLDLKSGFVKVKESWLLLPAIIS 641

Query: 523  AFILSDIWRKEGSSAFISARKNSKVVSLTES--------DDVESGKIQGTFLEKDELAEK 368
            AFILSDI +KEG + F S R+N +V SL E         + +         +E +    K
Sbjct: 642  AFILSDILKKEGYNGFTSNRENLEVDSLVEKAKGFHEEPEQISLTAASEGNMELNVDVAK 701

Query: 367  GSLVLAEK------GENKKCGDMVKNDVXXXXXXXXXXXXXGNVVKNNASSLCYGNVVQN 206
            GS+V +        G    CGDMV++                 V  N+  S C G+ +++
Sbjct: 702  GSIVRSGNCGGGCGGCGSGCGDMVRSGNCGGGCGGCGSGCGDMVSGNSGDSGC-GDTMKS 760

Query: 205  DISSFCG--GGSCADGYGNVKKN 143
              S  CG  GG C  G GN+ ++
Sbjct: 761  GNSGGCGGCGGGCGGGCGNMVRS 783


>ref|XP_002265108.2| PREDICTED: uncharacterized protein LOC100252003 [Vitis vinifera]
          Length = 825

 Score =  166 bits (419), Expect = 9e-39
 Identities = 100/251 (39%), Positives = 137/251 (54%), Gaps = 9/251 (3%)
 Frame = -2

Query: 883  AKKEIIGIVGYSDETRVLAEFSERGWCLMDFNWSSQLQKKSRDDCHFFELRGNHMVLLFP 704
            +++E+IG+   S ET  LAEF   GW LMD+NW  + +KKS  D H FEL GN MV ++P
Sbjct: 525  SRREVIGVTT-SLETITLAEFVGTGWSLMDYNWCLKFEKKSGKDGHLFELVGNRMVKIYP 583

Query: 703  GRKLDYEPKYCQTQKNEGDFMTAVEFSKSDPYGKAIALFNLKSGVLKVDEDWFALSAITL 524
            GRKL++E K+C+ QK++  F+TAVEFS   PYG+A+AL +LKSG LKV+E+W  L  I L
Sbjct: 584  GRKLEFEHKHCERQKSDHGFLTAVEFSAEVPYGRAVALLDLKSGFLKVNEEWLVLPGIIL 643

Query: 523  AFILSDIWRKEGSSAFISARKNSK----VVSLTESDDVESGKIQGTFLEKDELAEKGSLV 356
             FILSDI RKEG  +F  +  N K    +    E ++       G  +E      +G+ V
Sbjct: 644  VFILSDILRKEGCDSFTVSEGNLKETENLSGCYEDENPNLSNTMGLEVESKMEGPEGNAV 703

Query: 355  LAEKGENKKCGDMVKNDVXXXXXXXXXXXXXGNVVKNNASSLC-----YGNVVQNDISSF 191
            + E+G +   G                    GN+ K+     C      GN+V+   S  
Sbjct: 704  MPEEGRSHSGG-----------CGSGCGGGCGNMSKSGGCGGCGGCGGCGNMVK---SGG 749

Query: 190  CGGGSCADGYG 158
            CGGG C  G G
Sbjct: 750  CGGGGCGGGCG 760


>ref|XP_003612947.1| Glycine-rich protein [Medicago truncatula]
            gi|163889366|gb|ABY48136.1| glycine-rich protein
            [Medicago truncatula] gi|355514282|gb|AES95905.1|
            Glycine-rich protein [Medicago truncatula]
          Length = 897

 Score =  157 bits (398), Expect = 2e-36
 Identities = 105/283 (37%), Positives = 141/283 (49%), Gaps = 12/283 (4%)
 Frame = -2

Query: 877  KEIIGIVGYSDETRVLAEFSERGWCLMDFNWSSQLQKKSRDDCHFFELRGNHMVLLFPGR 698
            KE+ G++  S ETR LAE+ E GW  MD  W      KS++D H FEL G   + +F GR
Sbjct: 522  KEVAGLME-SGETRTLAEYMENGWSFMDNLWLLHRPSKSKNDGHIFELTGTKTIKIFSGR 580

Query: 697  KLDYEPKYCQTQKNEGDFMTAVEFSKSDPYGKAIALFNLKSGVLKVDEDWFALSAITLAF 518
            K +YE +Y   Q NE DF+TAVEFS  DPYGKA+AL +LKS ++   E W  L  I LAF
Sbjct: 581  KGEYELRYHLKQGNEMDFLTAVEFSIEDPYGKAVALLDLKSNLVSAKEKWMVLPGIILAF 640

Query: 517  ILSDIWRKEGSSAFISARKNSKVVSLTESDDVESGKIQGTFLEKDELAEKGSLVLAE--- 347
            + SDI +KEG    I+  K+ +VV   E  ++E   + G  L +D    K  +VL+    
Sbjct: 641  LASDIMKKEGYEGIIAKSKDLEVVDTYE--EIERNDLNGAELSRDVGITK-KVVLSSGGC 697

Query: 346  -KGENKKCGDMVKNDVXXXXXXXXXXXXXGNVVK-----NNASSLCYGNVVQNDISSFCG 185
              G    CG+ V++               GN++K     +   S C G       S  CG
Sbjct: 698  GSGCGSGCGNAVRSGGCGGCGAGGCGGGCGNMIKSGGCGSGCGSGCGGGCGNMIKSGGCG 757

Query: 184  ---GGSCADGYGNVKKNDXXXXXXXXXXXXGYGNVVKSEICDG 65
               GG C  G GN+ K+             G GN++KS  C G
Sbjct: 758  GGCGGGCGGGCGNIIKSGGCGGGCDGGCGGGCGNIIKSGGCGG 800


>emb|CBI25715.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  155 bits (392), Expect = 1e-35
 Identities = 77/144 (53%), Positives = 101/144 (70%)
 Frame = -2

Query: 883 AKKEIIGIVGYSDETRVLAEFSERGWCLMDFNWSSQLQKKSRDDCHFFELRGNHMVLLFP 704
           +++E+IG+   S ET  LAEF   GW LMD+NW  + +KKS  D H FEL GN MV ++P
Sbjct: 499 SRREVIGVTT-SLETITLAEFVGTGWSLMDYNWCLKFEKKSGKDGHLFELVGNRMVKIYP 557

Query: 703 GRKLDYEPKYCQTQKNEGDFMTAVEFSKSDPYGKAIALFNLKSGVLKVDEDWFALSAITL 524
           GRKL++E K+C+ QK++  F+TAVEFS   PYG+A+AL +LKSG LKV+E+W  L  I L
Sbjct: 558 GRKLEFEHKHCERQKSDHGFLTAVEFSAEVPYGRAVALLDLKSGFLKVNEEWLVLPGIIL 617

Query: 523 AFILSDIWRKEGSSAFISARKNSK 452
            FILSDI RKEG  +F  +  N K
Sbjct: 618 VFILSDILRKEGCDSFTVSEGNLK 641


>ref|XP_004164454.1| PREDICTED: uncharacterized protein LOC101228427 [Cucumis sativus]
          Length = 853

 Score =  150 bits (380), Expect = 3e-34
 Identities = 95/282 (33%), Positives = 138/282 (48%), Gaps = 5/282 (1%)
 Frame = -2

Query: 892  NLKAKKEIIGIVGYSDETRVLAEFSERGWCLMDFNWSSQLQKKSRDDCHFFELRGNHMVL 713
            N+   KE+IGI   S E+  LAEF + GW L+D  W   LQ+KS +D H F+L G  +V 
Sbjct: 524  NIPTSKEVIGIK-MSGESCHLAEFVKTGWSLIDGQWLLDLQQKSSEDDHLFKLVGKRLVR 582

Query: 712  LFPGRKLDYEPKYCQTQKNEGDFMTAVEFSKSDPYGKAIALFNLKSGVLKVDEDWFALSA 533
             + GRKLDYEPK C+    E DFM+A+EFS   PYG+A+ALF+LK GV+K+ E+W  +  
Sbjct: 583  FYQGRKLDYEPKNCEKHNREQDFMSAIEFSAEYPYGRAVALFDLKFGVIKIKEEWMLVPG 642

Query: 532  ITLAFILSDIWRKEGSSAFISARKNSKVVSLTESDDVESGKIQGTFLEKDELAEKGSLVL 353
            I  AF+L   W+K+G ++        K+ + T+ + V+    +   +    L+   + + 
Sbjct: 643  ILTAFLLLHTWKKKGYNSL--TVNEEKLEADTDHERVQKSGKEEMTMNLTNLSSSSTDLK 700

Query: 352  AEKGEN-----KKCGDMVKNDVXXXXXXXXXXXXXGNVVKNNASSLCYGNVVQNDISSFC 188
            A   E       K  D  +N                N VK+       GN+V++     C
Sbjct: 701  ANVSEGIAVVPIKEEDSKENITMSLNQDKLSSHCDQNTVKSGGR----GNMVKSGGCGGC 756

Query: 187  GGGSCADGYGNVKKNDXXXXXXXXXXXXGYGNVVKSEICDGC 62
            G G C    GN+ K+               GN+V S  C GC
Sbjct: 757  GAGGCGSECGNMVKSGGCGGGCGGGC----GNIVNSGGCGGC 794


Top