BLASTX nr result

ID: Coptis25_contig00005427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005427
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331306.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002311066.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002315328.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002331306.1| predicted protein [Populus trichocarpa] gi|222873889|gb|EEF11020.1|
            predicted protein [Populus trichocarpa]
          Length = 1021

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/65 (46%), Positives = 43/65 (66%)
 Frame = +3

Query: 3    DPILLSEGDDTLGDTNSMRIGSHRRTKLLECMTAIVRIGVACSVESPSERMDIRDVSREL 182
            DP LL E  +  GD +   I S R ++ LEC+ +I+RIG++CSVE P ERM I D   +L
Sbjct: 943  DPTLLQE--EPTGDDDKHEISSMRNSRPLECLNSILRIGISCSVEFPRERMKISDAVAQL 1000

Query: 183  HAIRD 197
            H++R+
Sbjct: 1001 HSVRN 1005


>ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|222850887|gb|EEE88434.1|
            predicted protein [Populus trichocarpa]
          Length = 1025

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = +3

Query: 3    DPILLSEGDDTLGDTNSM--RIGSHRRTKLLECMTAIVRIGVACSVESPSERMDIRDVSR 176
            DP+L++E ++T GD +     IG+H     +EC+ AIV++GVACS E P ERM+I  V+ 
Sbjct: 953  DPVLVTEAEETSGDASRRMSHIGNH-----MECLAAIVKVGVACSAEFPRERMEISSVAV 1007

Query: 177  ELHAIR 194
            EL  IR
Sbjct: 1008 ELRRIR 1013


>ref|XP_002311066.1| predicted protein [Populus trichocarpa] gi|222850886|gb|EEE88433.1|
            predicted protein [Populus trichocarpa]
          Length = 1023

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = +3

Query: 3    DPILLSEGDDTLGDTNSM--RIGSHRRTKLLECMTAIVRIGVACSVESPSERMDIRDVSR 176
            DP+L++E ++T GD +     IG+H     +EC+ AIV++GVACS E P ERM+I  V+ 
Sbjct: 951  DPVLVTEAEETSGDASRRMSHIGNH-----MECLAAIVKVGVACSAEFPRERMEISSVAV 1005

Query: 177  ELHAIR 194
            EL  IR
Sbjct: 1006 ELRRIR 1011


>ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1|
            predicted protein [Populus trichocarpa]
          Length = 1032

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
 Frame = +3

Query: 3    DPILLSEGDDTLGD---TNSMRIGSHRRT-KLLECMTAIVRIGVACSVESPSERMDIRDV 170
            DP L+ E ++T  D   T+S R  +H  T K++EC+  I+++GVAC+VESP ER+DI +V
Sbjct: 953  DPALVREAEETSADHASTSSAR--NHNGTEKIMECLVLIIKVGVACAVESPRERIDISNV 1010

Query: 171  SRELHAIRDACI 206
            + EL+ IR   I
Sbjct: 1011 ATELYRIRKILI 1022


>ref|XP_002315328.1| predicted protein [Populus trichocarpa] gi|222864368|gb|EEF01499.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/66 (48%), Positives = 45/66 (68%)
 Frame = +3

Query: 3   DPILLSEGDDTLGDTNSMRIGSHRRTKLLECMTAIVRIGVACSVESPSERMDIRDVSREL 182
           D IL  + ++T  D  S ++   R  K+LEC+T+I  +GVACSV+SP ERMDIR+V+ EL
Sbjct: 241 DRILFRDVEETDADA-SHKMSHIRDNKILECLTSITTLGVACSVDSPRERMDIRNVAAEL 299

Query: 183 HAIRDA 200
             IR +
Sbjct: 300 LRIRSS 305


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