BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005423
         (2478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts ...   424   e-116
ref|XP_002524565.1| elongation factor ts, putative [Ricinus comm...   410   e-112
ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondri...   407   e-111
ref|NP_192850.2| putative translation elongation factor Ts [Arab...   407   e-111
ref|NP_001061749.1| Os08g0399600 [Oryza sativa Japonica Group] g...   405   e-110

>ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts precursor [Solanum
            lycopersicum] gi|5669636|gb|AAD46403.1|AF096247_1
            ethylene-responsive elongation factor EF-Ts precursor
            [Solanum lycopersicum]
          Length = 391

 Score =  424 bits (1090), Expect = e-116
 Identities = 235/368 (63%), Positives = 278/368 (75%)
 Frame = -3

Query: 2476 ILFNHLGSSRQSLHGYTCLAPQIAKINQTGTLFNSSNELSLGRQLFLRSFSAQVSSSDQL 2297
            I++  L SS  S H Y+ L      I ++G  F+          + +R +SA++SSS+Q+
Sbjct: 13   IIYKSLNSSICSGHDYSTLTRYGNSIAKSGGYFHQHGNGPRSCAVSIRRYSAEISSSEQM 72

Query: 2296 NLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLASKKSLRTATEGLLALAQ 2117
            NLIK LRERTSAPIK+VK+ALV  NWDIE AQ +LRKRGIVLASKKS RTA EGLLALAQ
Sbjct: 73   NLIKQLRERTSAPIKEVKAALVTSNWDIEAAQKDLRKRGIVLASKKSSRTAAEGLLALAQ 132

Query: 2116 NESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXSPEQVSTAFSLGSDYLEELKI 1937
            NE KAA+IELNCETDFV+RNEIFQY              S +Q   AF +G  +LEELK+
Sbjct: 133  NERKAAVIELNCETDFVARNEIFQYLALSLAKLALLLEGS-QQSFAAFPIG--HLEELKL 189

Query: 1936 NLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXXXXYLHTSPQPGLGRLA 1757
            NLDHPKLSGE +VQ AITEVAAM+GENVKLRR              YLHTSPQPG+GR+A
Sbjct: 190  NLDHPKLSGEKSVQNAITEVAAMMGENVKLRRGFAMSAPSLGVISTYLHTSPQPGVGRIA 249

Query: 1756 GIVTLESEDKKVPLDALLRVGSELAMHVVAAKPQFLSRELVSSEALERERDILKSQAEST 1577
            GI++LE EDK V  DAL RVGSELAMHVVAAKP FL++E VSS+AL  ER+ILKSQAES+
Sbjct: 250  GILSLEVEDKNVSEDALQRVGSELAMHVVAAKPLFLTKEDVSSDALSNEREILKSQAESS 309

Query: 1576 GKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDDLSKEVGFPVKVGKFFRM 1397
            GKPQIA+EKMVEGR+RKY EEVVL+EQKFIVND +NVK L+ +LSK+VG PVK+G F RM
Sbjct: 310  GKPQIAVEKMVEGRLRKYFEEVVLMEQKFIVNDTMNVKTLLSNLSKDVGSPVKIGSFLRM 369

Query: 1396 EVGEGIRR 1373
            EVGEG++R
Sbjct: 370  EVGEGLQR 377


>ref|XP_002524565.1| elongation factor ts, putative [Ricinus communis]
            gi|313118247|sp|B9SEZ6.1|EFTS_RICCO RecName:
            Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
            Short=EF-TsMt; Flags: Precursor
            gi|223536118|gb|EEF37773.1| elongation factor ts,
            putative [Ricinus communis]
          Length = 379

 Score =  410 bits (1054), Expect = e-112
 Identities = 219/325 (67%), Positives = 260/325 (80%), Gaps = 1/325 (0%)
 Frame = -3

Query: 2344 LFLRSFSAQV-SSSDQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLA 2168
            +F+R FSA   ++++Q++LIK LRERTSAPIKDVK++LV+CNWDIE AQ +LRKRG VLA
Sbjct: 41   MFVRLFSAHAPAAAEQMSLIKQLRERTSAPIKDVKASLVDCNWDIEAAQKDLRKRGKVLA 100

Query: 2167 SKKSLRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXSPEQ 1988
            SKKS R ATEGLLALAQNE KAALIELNCETDFV+RN+IFQ               + +Q
Sbjct: 101  SKKSGRAATEGLLALAQNEGKAALIELNCETDFVARNDIFQCLALSLAKQALLTENTAQQ 160

Query: 1987 VSTAFSLGSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXX 1808
             S    +G + LE+L INL+HPK+SGETTVQ AITEVAAM+GENVKLRR           
Sbjct: 161  ASGIHPVGPECLEDLMINLEHPKISGETTVQNAITEVAAMMGENVKLRRGFVMSTSLPGV 220

Query: 1807 XXXYLHTSPQPGLGRLAGIVTLESEDKKVPLDALLRVGSELAMHVVAAKPQFLSRELVSS 1628
               YLHTSPQPGLGR+AG+++LE ED    LD L  VGSELAMHVVAAKP FL++ELVSS
Sbjct: 221  LSTYLHTSPQPGLGRIAGLLSLEIEDGNSQLDVLHHVGSELAMHVVAAKPLFLTKELVSS 280

Query: 1627 EALERERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDD 1448
            +ALE ER+ILKSQAESTGK Q+AIEKMVEGR+RKY EEVVL+EQKFI+NDA+NVK ++++
Sbjct: 281  DALESEREILKSQAESTGKSQMAIEKMVEGRLRKYYEEVVLMEQKFIINDAVNVKTVLNN 340

Query: 1447 LSKEVGFPVKVGKFFRMEVGEGIRR 1373
            LSKEVG PVK+G FFRMEVGEGI+R
Sbjct: 341  LSKEVGSPVKIGSFFRMEVGEGIQR 365


>ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondrial [Vitis vinifera]
            gi|297738982|emb|CBI28227.3| unnamed protein product
            [Vitis vinifera]
          Length = 378

 Score =  407 bits (1046), Expect = e-111
 Identities = 213/324 (65%), Positives = 259/324 (79%)
 Frame = -3

Query: 2344 LFLRSFSAQVSSSDQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLAS 2165
            +F R FSA+  +S+ +NLIK LRERTS+PIKDVK+AL++CNWDIE AQ ELRKRG VLAS
Sbjct: 42   IFPRRFSAEAPASEHMNLIKQLRERTSSPIKDVKAALIDCNWDIEAAQKELRKRGKVLAS 101

Query: 2164 KKSLRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXSPEQV 1985
            K S RTA +GLLALAQNE++AA+IELNCETDFV+RN+IFQY               P   
Sbjct: 102  KMSARTAAQGLLALAQNETRAAVIELNCETDFVARNDIFQYLASSLAKLALSVENPPLSA 161

Query: 1984 STAFSLGSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXX 1805
            +    +G +YLE+LK+N DHPK SGETTVQ AITEVAAM+GENV+LRR            
Sbjct: 162  AGVSPVGPEYLEDLKMNFDHPKFSGETTVQNAITEVAAMMGENVRLRR-GFLMSTPNGIV 220

Query: 1804 XXYLHTSPQPGLGRLAGIVTLESEDKKVPLDALLRVGSELAMHVVAAKPQFLSRELVSSE 1625
              YLHT P+PGLGR+AG+++LE+ED+    DAL RVGSELAMHVVAAKP FL+RELVSSE
Sbjct: 221  STYLHTCPRPGLGRIAGVLSLEAEDQLSLSDALQRVGSELAMHVVAAKPLFLTRELVSSE 280

Query: 1624 ALERERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDDL 1445
            A+E ER+IL+SQAESTGK Q+AIEKMVEGR++KY+EEVVL+EQKF+VND+INVK ++++L
Sbjct: 281  AMESEREILRSQAESTGKSQLAIEKMVEGRLKKYVEEVVLMEQKFVVNDSINVKTVLNNL 340

Query: 1444 SKEVGFPVKVGKFFRMEVGEGIRR 1373
            SKEVG  VK+G FFRMEVGEGI+R
Sbjct: 341  SKEVGSSVKIGSFFRMEVGEGIQR 364


>ref|NP_192850.2| putative translation elongation factor Ts [Arabidopsis thaliana]
            gi|75287865|sp|Q5XF75.1|EFTS_ARATH RecName:
            Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
            Short=EF-TsMt; Flags: Precursor
            gi|52627103|gb|AAU84678.1| At4g11120 [Arabidopsis
            thaliana] gi|55167888|gb|AAV43776.1| At4g11120
            [Arabidopsis thaliana] gi|332657575|gb|AEE82975.1|
            putative translation elongation factor Ts [Arabidopsis
            thaliana]
          Length = 395

 Score =  407 bits (1046), Expect = e-111
 Identities = 223/371 (60%), Positives = 272/371 (73%), Gaps = 3/371 (0%)
 Frame = -3

Query: 2476 ILFNHLGSSRQSLHGYTCLAPQIAKINQTGTLFNSS-NELSLGRQLFLRSFSAQV--SSS 2306
            + +  + S   S + Y+ +A +   ++Q  +   S    L  G   F+RSFS++   + S
Sbjct: 13   VFYYSVSSRFSSGNEYSTVASKFETLSQYKSSVPSGYTSLVRGFGNFIRSFSSEAPPAVS 72

Query: 2305 DQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLASKKSLRTATEGLLA 2126
            DQ++LIK LRERTSAPIKDVK++LV CNWD+E AQ +LRKRG VLASKKS RTA EG+LA
Sbjct: 73   DQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGKVLASKKSSRTAAEGMLA 132

Query: 2125 LAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXSPEQVSTAFSLGSDYLEE 1946
            +AQNE K A+IELNCETDFV+RNEIFQY              S +QVS  F  G +  EE
Sbjct: 133  VAQNEGKVAVIELNCETDFVARNEIFQYLALAMAKHALLVESSSQQVSGVFPFGPELFEE 192

Query: 1945 LKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXXXXYLHTSPQPGLG 1766
             K+NLDHPK++GETTV  A+TEVAA++GENVK RR              YLHTSPQPGLG
Sbjct: 193  FKLNLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLMSKSSAGVLSAYLHTSPQPGLG 252

Query: 1765 RLAGIVTLESEDKKVPLDALLRVGSELAMHVVAAKPQFLSRELVSSEALERERDILKSQA 1586
            R+AGIV+LE E +   L+A+ RVGSELAMHVVAAKP FLS++LVSSEA+  ER+ILKSQA
Sbjct: 253  RIAGIVSLEVEGENTQLEAIQRVGSELAMHVVAAKPLFLSKDLVSSEAMANEREILKSQA 312

Query: 1585 ESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDDLSKEVGFPVKVGKF 1406
            ESTGK Q+AIEK+VEGR+RKY EEV L+EQKFIVNDAIN+K L+D+LSKEVG PVKV  F
Sbjct: 313  ESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFIVNDAINIKTLVDNLSKEVGSPVKVTDF 372

Query: 1405 FRMEVGEGIRR 1373
             R+EVGEGI R
Sbjct: 373  LRVEVGEGIER 383


>ref|NP_001061749.1| Os08g0399600 [Oryza sativa Japonica Group]
            gi|75294316|sp|Q6ZJS7.1|EFTS_ORYSJ RecName:
            Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
            Short=EF-TsMt; Flags: Precursor
            gi|37805964|dbj|BAC99379.1| putative ethylene-responsive
            elongation factor EF-Ts precursor [Oryza sativa Japonica
            Group] gi|113623718|dbj|BAF23663.1| Os08g0399600 [Oryza
            sativa Japonica Group] gi|215701316|dbj|BAG92740.1|
            unnamed protein product [Oryza sativa Japonica Group]
          Length = 366

 Score =  405 bits (1040), Expect = e-110
 Identities = 206/323 (63%), Positives = 253/323 (78%)
 Frame = -3

Query: 2338 LRSFSAQVSSSDQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLASKK 2159
            LR FS++V +S+Q+NLIK LRERTSAPIKDVK++LV+CNWDI+ AQ +LRKRG+VLA+KK
Sbjct: 47   LRRFSSEVPASEQMNLIKQLRERTSAPIKDVKASLVSCNWDIDVAQKDLRKRGVVLAAKK 106

Query: 2158 SLRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXSPEQVST 1979
            S RTA EGLLA+AQ+E +AA++ELNCETDFV+RN++FQY                E V  
Sbjct: 107  SSRTAAEGLLAIAQDEKRAAVVELNCETDFVARNDVFQYLASSLAKLALSARDPGELV-- 164

Query: 1978 AFSLGSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXXXX 1799
             F  G DYLE L +NLDHPKLSGETTVQ A+TEVAAMVGENVK RR              
Sbjct: 165  -FPFGPDYLENLNVNLDHPKLSGETTVQSAVTEVAAMVGENVKFRRGFIMSTTAHGVVCS 223

Query: 1798 YLHTSPQPGLGRLAGIVTLESEDKKVPLDALLRVGSELAMHVVAAKPQFLSRELVSSEAL 1619
            Y+HT PQPGLGRLAG++TLE+ED   PLDAL RVG  +AMH+VA KP FLS+ELVS+ A+
Sbjct: 224  YMHTCPQPGLGRLAGLITLEAEDSNAPLDALQRVGKSIAMHIVATKPLFLSKELVSASAV 283

Query: 1618 ERERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDDLSK 1439
            E ERDIL++QAES+GK Q+A+EKMVEGR+RKY EEVVLLEQK++VND+ N+K +++DLSK
Sbjct: 284  ENERDILRTQAESSGKSQMAMEKMVEGRLRKYFEEVVLLEQKYVVNDSTNIKSVLNDLSK 343

Query: 1438 EVGFPVKVGKFFRMEVGEGIRRS 1370
            EVG  V VG F RMEVGEG+ ++
Sbjct: 344  EVGSKVTVGNFARMEVGEGVSKA 366