BLASTX nr result

ID: Coptis25_contig00005419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005419
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002519140.1| sulfotransferase, putative [Ricinus communis...    62   5e-08
ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio...    60   2e-07
emb|CBI32503.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]    60   2e-07

>ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|222871344|gb|EEF08475.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
 Frame = +3

Query: 111 LPNDFAKTYQH-----LTIETSDGRTWPVVSSSKEYGSRLIKGWKEFVLDNHLEEDDKCI 275
           +P+ FA+T+ +     +T++ SDG+ WPV  S K+  ++L +GW EFV +N+LEE D CI
Sbjct: 232 IPSSFARTFLNTVTGFVTLQVSDGKQWPVRCSFKDGKAKLGQGWTEFVWENNLEEGDVCI 291

Query: 276 FELV 287
           FEL+
Sbjct: 292 FELI 295


>ref|XP_002519140.1| sulfotransferase, putative [Ricinus communis]
           gi|223541803|gb|EEF43351.1| sulfotransferase, putative
           [Ricinus communis]
          Length = 591

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
 Frame = +3

Query: 111 LPNDFAKTYQH----LTIETSDGRTWPVVSSSKEYGSRLIKGWKEFVLDNHLEEDDKCIF 278
           +P+ FA+ Y      +T++ S+G+ WPV    +  G++L KGW EF  DN+LEE D C+F
Sbjct: 271 IPSSFAQRYLTTTGCMTLQVSEGKQWPVRCVCRNRGAKLSKGWTEFAWDNNLEEGDVCVF 330

Query: 279 ELVD 290
           EL++
Sbjct: 331 ELIN 334


>ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Vitis vinifera]
          Length = 407

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
 Frame = +3

Query: 111 LPNDFAKTY-----QHLTIETSDGRTWPVVSSSKEYGSRLIKGWKEFVLDNHLEEDDKCI 275
           +P+ FA+ Y     + + ++TSDG+ W V   S E   +L KGW EFV DN+LEE D C+
Sbjct: 318 MPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCV 377

Query: 276 FELVD 290
           FEL++
Sbjct: 378 FELIN 382


>emb|CBI32503.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
 Frame = +3

Query: 111 LPNDFAKTY-----QHLTIETSDGRTWPVVSSSKEYGSRLIKGWKEFVLDNHLEEDDKCI 275
           +P+ FA+ Y     + + ++TSDG+ W V   S E   +L KGW EFV DN+LEE D C+
Sbjct: 266 MPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCV 325

Query: 276 FELVD 290
           FEL++
Sbjct: 326 FELIN 330


>emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]
          Length = 563

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
 Frame = +3

Query: 111 LPNDFAKTY-----QHLTIETSDGRTWPVVSSSKEYGSRLIKGWKEFVLDNHLEEDDKCI 275
           +P+ FA+ Y     + + ++TSDG+ W V   S E   +L KGW EFV DN+LEE D C+
Sbjct: 474 MPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCV 533

Query: 276 FELVD 290
           FEL++
Sbjct: 534 FELIN 538


Top