BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005411
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228...    77   1e-23
ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-conta...    77   1e-23
gb|ABP98986.1| putative ubiquitin associated/TS-N domain-contain...    70   2e-22
ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis...    75   3e-22
ref|XP_002522162.1| conserved hypothetical protein [Ricinus comm...    71   8e-22

>ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228515 [Cucumis sativus]
          Length = 291

 Score = 77.4 bits (189), Expect(2) = 1e-23
 Identities = 43/95 (45%), Positives = 50/95 (52%)
 Frame = -3

Query: 290 STRFRIFGINFSDKSFVYLAGLQVSWFYNYCMVFPFYQFLGWLDMK*FCSQLNSKCIFTV 111
           STRFR+FG+ FSDKSF+YLAGLQ                                     
Sbjct: 140 STRFRVFGVRFSDKSFIYLAGLQ------------------------------------- 162

Query: 110 TSQLLFSSWKRSILPGICGVLAGLLYSSNIFGIRR 6
              LL SSW+RSILPGICG+LAG LY  N+FGIR+
Sbjct: 163 ---LLLSSWRRSILPGICGILAGSLYRLNVFGIRK 194



 Score = 57.0 bits (136), Expect(2) = 1e-23
 Identities = 23/31 (74%), Positives = 29/31 (93%)
 Frame = -1

Query: 379 DPSLNMLASGPYGLIFSSFVPFYFDIPVSTR 287
           DP+ N++ SGPYGL+F+SFVPF+FDIPVSTR
Sbjct: 112 DPAANLVTSGPYGLLFASFVPFFFDIPVSTR 142


>ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-containing protein 2-like
           [Cucumis sativus]
          Length = 291

 Score = 77.4 bits (189), Expect(2) = 1e-23
 Identities = 43/95 (45%), Positives = 50/95 (52%)
 Frame = -3

Query: 290 STRFRIFGINFSDKSFVYLAGLQVSWFYNYCMVFPFYQFLGWLDMK*FCSQLNSKCIFTV 111
           STRFR+FG+ FSDKSF+YLAGLQ                                     
Sbjct: 140 STRFRVFGVRFSDKSFIYLAGLQ------------------------------------- 162

Query: 110 TSQLLFSSWKRSILPGICGVLAGLLYSSNIFGIRR 6
              LL SSW+RSILPGICG+LAG LY  N+FGIR+
Sbjct: 163 ---LLLSSWRRSILPGICGILAGSLYRLNVFGIRK 194



 Score = 57.0 bits (136), Expect(2) = 1e-23
 Identities = 23/31 (74%), Positives = 29/31 (93%)
 Frame = -1

Query: 379 DPSLNMLASGPYGLIFSSFVPFYFDIPVSTR 287
           DP+ N++ SGPYGL+F+SFVPF+FDIPVSTR
Sbjct: 112 DPAANLVTSGPYGLLFASFVPFFFDIPVSTR 142


>gb|ABP98986.1| putative ubiquitin associated/TS-N domain-containing protein
           [Hieracium piloselloides]
          Length = 289

 Score = 69.7 bits (169), Expect(2) = 2e-22
 Identities = 39/96 (40%), Positives = 49/96 (51%)
 Frame = -3

Query: 290 STRFRIFGINFSDKSFVYLAGLQVSWFYNYCMVFPFYQFLGWLDMK*FCSQLNSKCIFTV 111
           STRFR+  ++FSDKSF+YLAGLQ                                     
Sbjct: 140 STRFRVSTLSFSDKSFIYLAGLQ------------------------------------- 162

Query: 110 TSQLLFSSWKRSILPGICGVLAGLLYSSNIFGIRRI 3
              LLFSSWKRS++PG+CG+LAG LY  N+  IRR+
Sbjct: 163 ---LLFSSWKRSLIPGLCGILAGTLYRLNVLRIRRV 195



 Score = 61.2 bits (147), Expect(2) = 2e-22
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -1

Query: 379 DPSLNMLASGPYGLIFSSFVPFYFDIPVSTR 287
           DP+L++L SGPYGLIFSSFVPFYFDIPVSTR
Sbjct: 112 DPTLSVLTSGPYGLIFSSFVPFYFDIPVSTR 142


>ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis thaliana]
           gi|9662993|emb|CAC00737.1| putative protein [Arabidopsis
           thaliana] gi|21553945|gb|AAM63026.1| unknown
           [Arabidopsis thaliana] gi|28950711|gb|AAO63279.1|
           At3g56740 [Arabidopsis thaliana]
           gi|110735889|dbj|BAE99920.1| hypothetical protein
           [Arabidopsis thaliana] gi|332646039|gb|AEE79560.1|
           Ubiquitin-associated (UBA) protein [Arabidopsis
           thaliana]
          Length = 293

 Score = 75.5 bits (184), Expect(2) = 3e-22
 Identities = 42/95 (44%), Positives = 49/95 (51%)
 Frame = -3

Query: 290 STRFRIFGINFSDKSFVYLAGLQVSWFYNYCMVFPFYQFLGWLDMK*FCSQLNSKCIFTV 111
           STRFR+FG+NFSDKSF+YLAG+Q                                     
Sbjct: 140 STRFRVFGVNFSDKSFIYLAGVQ------------------------------------- 162

Query: 110 TSQLLFSSWKRSILPGICGVLAGLLYSSNIFGIRR 6
              LL SSWKRSI PGICG++AG LY  NI GIR+
Sbjct: 163 ---LLLSSWKRSIFPGICGIIAGSLYRLNILGIRK 194



 Score = 54.7 bits (130), Expect(2) = 3e-22
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = -1

Query: 379 DPSLNMLASGPYGLIFSSFVPFYFDIPVSTR 287
           D + N+L SGPYGLIF+SF+PFY DIPVSTR
Sbjct: 112 DTTANLLTSGPYGLIFASFIPFYLDIPVSTR 142


>ref|XP_002522162.1| conserved hypothetical protein [Ricinus communis]
           gi|223538600|gb|EEF40203.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 289

 Score = 70.9 bits (172), Expect(2) = 8e-22
 Identities = 40/95 (42%), Positives = 47/95 (49%)
 Frame = -3

Query: 290 STRFRIFGINFSDKSFVYLAGLQVSWFYNYCMVFPFYQFLGWLDMK*FCSQLNSKCIFTV 111
           STRFR+FG+ FSDKSFVYLAGL                                      
Sbjct: 138 STRFRVFGVRFSDKSFVYLAGL-------------------------------------- 159

Query: 110 TSQLLFSSWKRSILPGICGVLAGLLYSSNIFGIRR 6
             QLL SSWKRS+LPG+CG+ AG LY  N+  IR+
Sbjct: 160 --QLLLSSWKRSVLPGMCGIFAGSLYRLNLLSIRK 192



 Score = 57.8 bits (138), Expect(2) = 8e-22
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = -1

Query: 379 DPSLNMLASGPYGLIFSSFVPFYFDIPVSTR 287
           DP+ N+L SGPYG+IF+SFVPF+FDIPVSTR
Sbjct: 110 DPTANLLTSGPYGVIFASFVPFFFDIPVSTR 140