BLASTX nr result
ID: Coptis25_contig00005396
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00005396
(1502 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera] 141 5e-31
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 139 3e-30
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm... 137 7e-30
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 136 2e-29
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 132 2e-28
>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
Length = 530
Score = 141 bits (355), Expect = 5e-31
Identities = 119/337 (35%), Positives = 167/337 (49%), Gaps = 36/337 (10%)
Frame = -1
Query: 905 WLDLPDHLTSLVAEKLVGNVRDLIVFSAVCTSWHSVYI---QNLKFRDR---LPRQLPYV 744
W LPD L + L V D I F AVCT WHS+ + Q L R P LP++
Sbjct: 133 WAWLPDDLLEPILNNLASIV-DSIRFGAVCTPWHSLAVKSFQRLPVNQRPHLQPPPLPWL 191
Query: 743 MLPTEFDRDDQTRSCYSISSNKLCGFHLRVPQDRICHGSSYGWLVTVHDNLDVSLLNPFL 564
M+ ++ + D +RS YSI+ KL FHL VP GSS+GWL+T + VSLL+PF
Sbjct: 192 MVLSKPNSKD-SRSFYSITHQKLSKFHLPVPPGTRYCGSSHGWLITTDETNAVSLLHPF- 249
Query: 563 SVNNEIHLPPLSTF---QRTGNDPLHNHYMIKAVLSANPSLNP-NYVVAAIHGDRKVLAF 396
I LPPL+ QRT +++ K VLSANP+ NP ++V+ I+G K LAF
Sbjct: 250 -SRQVIRLPPLTRLKIPQRTVYG--FEYHLHKGVLSANPTSNPDDFVLMVIYGHDKGLAF 306
Query: 395 WRPGDTAWT----------------SLDIKYRAFRDLVYYRD--QFYVVDNVGVIFAFDA 270
+ GD W LD+ F D++Y QFY + + A
Sbjct: 307 IKSGDQNWAYIDSMVMKDDVLDSPYFLDLSLFGFEDVIYQERELQFYALSYDSQVLAIKT 366
Query: 269 NHPHPKLSVVSP---SALVEESRYIVES--SGDLLQVLRDVQVTEDDLAYFTR--GFQVF 111
+ + VV P + Y+VES DL Q+ + ++++ + GF+VF
Sbjct: 367 SGIGNMVKVVPPYNFGFVPAFKLYLVESPEGRDLWQI--------EKVSFYDKSSGFKVF 418
Query: 110 KLLD-STRDEWVEVKSLDGRVLFLGDNTSMSLLASDF 3
++D T+ EWVEV SL LFLGDN S+++ AS F
Sbjct: 419 VMVDRETKPEWVEVNSLGDVALFLGDNDSIAVTASRF 455
>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
Length = 389
Score = 139 bits (349), Expect = 3e-30
Identities = 107/337 (31%), Positives = 163/337 (48%), Gaps = 35/337 (10%)
Frame = -1
Query: 908 NWLDLPDHLTSLVAEKLVGNVRDLIVFSAVCTSWHSVYIQNLKFRDRLPRQLPYVMLPTE 729
+W L L +A+K D + F AVC +W + K LP QLP++MLP
Sbjct: 3 DWSQLHPELLDFIAKKFK-IYTDYVRFRAVCHNWRASVP---KTPHHLPTQLPWLMLPQS 58
Query: 728 FDRDDQTRSCYSISSNKLCGFH-LRVPQD---RICHGSSYGWLVTVHDNLDVSLLNPFLS 561
R +S+S NK FH L++P+ R GSS+GWL+ + + ++ LLNP
Sbjct: 59 QPHHTH-RPFFSLSLNK---FHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPL-- 112
Query: 560 VNNEIHLPPLSTFQ----------------RTGNDPLHNH--------YMIKAVLSANPS 453
+++HLPPLSTF RT + ++ ++ K +LS++P+
Sbjct: 113 TRSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPA 172
Query: 452 LNPNYVVAAIHGDRKVLAFWRPGDTAWTSLDIKYRAFRDLVYYRDQFYVVDNVGVIFAFD 273
+++ I LA R D +WT L+ D++++R FY V+ G I D
Sbjct: 173 NGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCD 232
Query: 272 ANHPHPKLSVVS-PSALVEESRYIVESSGDLLQVLR------DVQVTEDDLAYFTRGFQV 114
+ P++S++ P + +Y+VES +LL V R DV+ + L Y T FQV
Sbjct: 233 VSGSSPRVSIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQV 292
Query: 113 FKLLDSTRDEWVEVKSLDGRVLFLGDNTSMSLLASDF 3
+ LDS W V SL R LFLG+N S+SL + DF
Sbjct: 293 CR-LDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDF 328
>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
gi|223551313|gb|EEF52799.1| conserved hypothetical
protein [Ricinus communis]
Length = 402
Score = 137 bits (345), Expect = 7e-30
Identities = 102/326 (31%), Positives = 162/326 (49%), Gaps = 25/326 (7%)
Frame = -1
Query: 905 WLDLPDHLTSLVAEKLVGNVRDLIVFSAVCTSWHSVYIQNLKFRDRLPRQLPYVMLPTEF 726
W +LP L ++A+K V D +V AVC SW S + + + L QLP+++LP
Sbjct: 5 WAELPPELLQVIADKHTNYV-DYLVTRAVCGSWQSAIAK--RPHNHLLCQLPFLLLPYYQ 61
Query: 725 DRDDQTRSCYSISSNKLCGFHLRVPQDRICHGSSYGWLVTVHDNLDVSLLNPFLSVNNEI 546
+ D+ R Y+IS +K+ L ++ C GSS+GWL+ V D+ + LLNP I
Sbjct: 62 NNPDR-RGFYNISDDKIYVLELPEAYEKRCCGSSHGWLIMVEDSPSIFLLNPL--TRERI 118
Query: 545 HLPPLSTFQRTGNDPLHNH-------------------YMIKAVLSANPSLNPNYVVAAI 423
LP LSTF D + + +++KA+LS++PSL+ N++ I
Sbjct: 119 ELPALSTFSIFPTDVVFENSRNLNENFIMREKFHIRDTFIVKAILSSDPSLDTNFMAVVI 178
Query: 422 HGDRKVLAFWRPGDTAWTSLD---IKYRAFRDLVYYRDQFYVVDNVGVIFAFDANHPHPK 252
+G + LAF R GD AWT +D R ++D ++ + + VD G I + +
Sbjct: 179 YGVNENLAFCRSGDAAWTVIDETTSPPRRYKDALFRAGKLFAVDQTGGISILTEENTMIR 238
Query: 251 LS---VVSPSALVEESRYIVESSGDLLQVLRDVQVTEDDLAYFTRGFQVFKLLDSTRDEW 81
+ +VS ++ S +LL V R +V D Y T F+++KL D W
Sbjct: 239 FADPPLVSSRTGYKQWYLASYSEEELLIVCRYRKVV-PDYEYKTERFEIYKLDDG---GW 294
Query: 80 VEVKSLDGRVLFLGDNTSMSLLASDF 3
+ +SL ++LFLG N S+S+ A D+
Sbjct: 295 KKKESLGDKMLFLGGNGSLSISALDY 320
>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
Length = 389
Score = 136 bits (342), Expect = 2e-29
Identities = 106/337 (31%), Positives = 162/337 (48%), Gaps = 35/337 (10%)
Frame = -1
Query: 908 NWLDLPDHLTSLVAEKLVGNVRDLIVFSAVCTSWHSVYIQNLKFRDRLPRQLPYVMLPTE 729
+W L L +A+K D + F AVC +W + K LP QLP++MLP
Sbjct: 3 DWSQLHPELLDFIAKKFK-IYTDYVRFRAVCHNWRASVP---KTPHHLPTQLPWLMLPQS 58
Query: 728 FDRDDQTRSCYSISSNKLCGFH-LRVPQD---RICHGSSYGWLVTVHDNLDVSLLNPFLS 561
R +S+S NK FH L++P+ R GSS+GWL+ + + ++ LLNP
Sbjct: 59 QPHHTH-RPFFSLSLNK---FHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPL-- 112
Query: 560 VNNEIHLPPLSTFQ----------------RTGNDPLHNH--------YMIKAVLSANPS 453
+++HLPPLSTF RT + ++ ++ K +LS++P+
Sbjct: 113 TRSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPA 172
Query: 452 LNPNYVVAAIHGDRKVLAFWRPGDTAWTSLDIKYRAFRDLVYYRDQFYVVDNVGVIFAFD 273
+++ I LA R D +WT L+ D++++R FY V+ G I D
Sbjct: 173 NGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCD 232
Query: 272 ANHPHPKLSVVS-PSALVEESRYIVESSGDLLQVLR------DVQVTEDDLAYFTRGFQV 114
+ P++S++ P + +Y+VES +LL V R DV+ + L Y T FQV
Sbjct: 233 VSGSSPRVSIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQV 292
Query: 113 FKLLDSTRDEWVEVKSLDGRVLFLGDNTSMSLLASDF 3
+ LD W V SL R LFLG+N S+SL + DF
Sbjct: 293 CR-LDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDF 328
>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
predicted protein [Populus trichocarpa]
Length = 393
Score = 132 bits (333), Expect = 2e-28
Identities = 99/331 (29%), Positives = 158/331 (47%), Gaps = 30/331 (9%)
Frame = -1
Query: 911 VNWLDLPDHLTSLVAEKLVGNVRDLIVFSAVCTSWHSVYIQNLKFRDRLPRQLPYVMLPT 732
V+W LP L ++++K+ D + F AVC +W S K + LP QLP+++LP
Sbjct: 3 VDWTQLPPELIEIISKKIT-IYSDYLHFQAVCHAWKSSIP---KTPNHLPPQLPWLLLPQ 58
Query: 731 EFDRDDQTRSCYSISSNKLCGFHLRVPQDRICH-GSSYGWLVTVHDNLDVSLLNPFLSVN 555
R+ +++S+ K +L R H GSS+GWL+ + D+ + ++NP
Sbjct: 59 SQSNQSSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPL--TR 116
Query: 554 NEIHLPPLSTFQRT--------GNDPL----------------HNHYMIKAVLSANPSLN 447
+IHLP +S+F G + L + ++ K V+S++P
Sbjct: 117 RKIHLPAISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEK 176
Query: 446 PN--YVVAAIHGDRKVLAFWRPGDTAWTSLDIKYRAFRDLVYYRDQFYVVDNVGVIFAFD 273
+V AI LA+ + GD W ++ D++Y+ FY V+ G I D
Sbjct: 177 KGDFFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCD 236
Query: 272 ANHPHPKLSVV-SPSALVEESRYIVESSGDLLQVLR--DVQVTEDDLAYFTRGFQVFKLL 102
N PK+S + +P + + +Y+V S LL V R D+ V D Y T F+VFK L
Sbjct: 237 VNGNSPKVSFIETPRQIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFK-L 295
Query: 101 DSTRDEWVEVKSLDGRVLFLGDNTSMSLLAS 9
D W V SL +LF+G+N+S++L AS
Sbjct: 296 DLNGPRWERVTSLGDMMLFIGENSSLALSAS 326