BLASTX nr result

ID: Coptis25_contig00005358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005358
         (1576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37711.3| unnamed protein product [Vitis vinifera]              478   e-132
ref|XP_002280082.1| PREDICTED: uncharacterized protein LOC100252...   474   e-131
ref|XP_002312791.1| predicted protein [Populus trichocarpa] gi|2...   470   e-130
ref|XP_002328286.1| predicted protein [Populus trichocarpa] gi|2...   465   e-128
ref|XP_002514392.1| conserved hypothetical protein [Ricinus comm...   456   e-126

>emb|CBI37711.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score =  478 bits (1230), Expect = e-132
 Identities = 234/332 (70%), Positives = 272/332 (81%)
 Frame = +2

Query: 380  YISSGSMDVSSPQNGSIVGFFRGRGFDDKNIHDMFKKCKRLQGAENERASENWDYLKSIG 559
            ++  G M++SS QNGSI+ FFR +GFDDK+IH+MFKKCKRL+G   +RASENW YL++IG
Sbjct: 18   FLGKGDMEISSSQNGSIMWFFRDKGFDDKSIHEMFKKCKRLEGVHRDRASENWAYLRTIG 77

Query: 560  IEERKLPSVVLKCPRILTLGLNEKLVPMVQCLTTLAKKPSEVALVITKFPHILSHSVEEK 739
            I++RK+PS+V KCP+IL LGLNEK+VPMVQCL TL  KPSEVA  I KFPHILSHSVEEK
Sbjct: 78   IQDRKIPSIVTKCPKILALGLNEKIVPMVQCLATLGTKPSEVASAIAKFPHILSHSVEEK 137

Query: 740  LCPLLAFFEVLGVPETQLGKLLFLNPRLISYSIELKLTQIVDFLASLGLNKEGMIGKVLL 919
            LCPLLAFF+ LGVPE QLGK++ +NPRLISYSIE KLTQIVDFLASLG  +EGMIGKVL 
Sbjct: 138  LCPLLAFFQALGVPEKQLGKVILVNPRLISYSIESKLTQIVDFLASLGFTREGMIGKVLQ 197

Query: 920  KNPFIMGYSVDKRLRPTSEFLKSIGLTELDLQRMAVNYPEVLCRDVEKILRPNCTFIKTC 1099
            K PFIMGYSVDKRLRPTSEFLK IGLTE DLQ++A+N+PEV CRD  KIL PN  ++K  
Sbjct: 198  KYPFIMGYSVDKRLRPTSEFLKLIGLTEQDLQKVAMNFPEVFCRDANKILSPNVAYLKRR 257

Query: 1100 GFGDRQVATLVAGYPPILIKSIRNSLEPRIRFLVEVMGRNINEVVDYPDFFRHGXXXXXX 1279
            GF D Q+A LV+GYPPILIKSI+NSLEPRIRFLVEVM R+INEVV+YPDFFR G      
Sbjct: 258  GFEDGQIAALVSGYPPILIKSIKNSLEPRIRFLVEVMKRDINEVVNYPDFFRCGLKKTLE 317

Query: 1280 XXXXXXXXXNVGCSLTEMLECNQKKFSDKFDL 1375
                      + CSL+EML+CNQKKF  KF+L
Sbjct: 318  LRQKLLEQRKIECSLSEMLDCNQKKFLLKFNL 349


>ref|XP_002280082.1| PREDICTED: uncharacterized protein LOC100252027 [Vitis vinifera]
          Length = 331

 Score =  474 bits (1219), Expect = e-131
 Identities = 233/326 (71%), Positives = 269/326 (82%)
 Frame = +2

Query: 398  MDVSSPQNGSIVGFFRGRGFDDKNIHDMFKKCKRLQGAENERASENWDYLKSIGIEERKL 577
            M++SS QNGSI+ FFR +GFDDK+IH+MFKKCKRL+G   +RASENW YL++IGI++RK+
Sbjct: 1    MEISSSQNGSIMWFFRDKGFDDKSIHEMFKKCKRLEGVHRDRASENWAYLRTIGIQDRKI 60

Query: 578  PSVVLKCPRILTLGLNEKLVPMVQCLTTLAKKPSEVALVITKFPHILSHSVEEKLCPLLA 757
            PS+V KCP+IL LGLNEK+VPMVQCL TL  KPSEVA  I KFPHILSHSVEEKLCPLLA
Sbjct: 61   PSIVTKCPKILALGLNEKIVPMVQCLATLGTKPSEVASAIAKFPHILSHSVEEKLCPLLA 120

Query: 758  FFEVLGVPETQLGKLLFLNPRLISYSIELKLTQIVDFLASLGLNKEGMIGKVLLKNPFIM 937
            FF+ LGVPE QLGK++ +NPRLISYSIE KLTQIVDFLASLG  +EGMIGKVL K PFIM
Sbjct: 121  FFQALGVPEKQLGKVILVNPRLISYSIESKLTQIVDFLASLGFTREGMIGKVLQKYPFIM 180

Query: 938  GYSVDKRLRPTSEFLKSIGLTELDLQRMAVNYPEVLCRDVEKILRPNCTFIKTCGFGDRQ 1117
            GYSVDKRLRPTSEFLK IGLTE DLQ++A+N+PEV CRD  KIL PN  ++K  GF D Q
Sbjct: 181  GYSVDKRLRPTSEFLKLIGLTEQDLQKVAMNFPEVFCRDANKILSPNVAYLKRRGFEDGQ 240

Query: 1118 VATLVAGYPPILIKSIRNSLEPRIRFLVEVMGRNINEVVDYPDFFRHGXXXXXXXXXXXX 1297
            +A LV+GYPPILIKSI+NSLEPRIRFLVEVM R+INEVV+YPDFFR G            
Sbjct: 241  IAALVSGYPPILIKSIKNSLEPRIRFLVEVMKRDINEVVNYPDFFRCGLKKTLELRQKLL 300

Query: 1298 XXXNVGCSLTEMLECNQKKFSDKFDL 1375
                + CSL+EML+CNQKKF  KF+L
Sbjct: 301  EQRKIECSLSEMLDCNQKKFLLKFNL 326


>ref|XP_002312791.1| predicted protein [Populus trichocarpa] gi|222849199|gb|EEE86746.1|
            predicted protein [Populus trichocarpa]
          Length = 316

 Score =  470 bits (1209), Expect = e-130
 Identities = 225/315 (71%), Positives = 264/315 (83%)
 Frame = +2

Query: 425  SIVGFFRGRGFDDKNIHDMFKKCKRLQGAENERASENWDYLKSIGIEERKLPSVVLKCPR 604
            SI+ FFR RGFDD  +H+MF+KCK LQG + +RAS NW YLK+IGI+ERKLPS++ KCP+
Sbjct: 2    SILWFFRDRGFDDNAVHEMFRKCKCLQGTQGDRASGNWAYLKTIGIQERKLPSIISKCPK 61

Query: 605  ILTLGLNEKLVPMVQCLTTLAKKPSEVALVITKFPHILSHSVEEKLCPLLAFFEVLGVPE 784
            +LTLGLNEKL+PMV+CL TL  KP E+A  IT+FPHILSHSVEEKLCPLLAFF+ LGVPE
Sbjct: 62   VLTLGLNEKLIPMVECLATLGSKPREIASAITRFPHILSHSVEEKLCPLLAFFQALGVPE 121

Query: 785  TQLGKLLFLNPRLISYSIELKLTQIVDFLASLGLNKEGMIGKVLLKNPFIMGYSVDKRLR 964
             QLGK+L LNPRLISYSI+ KLTQIVDFLA+LGL K+GMIGKVL+K+PFIMGYSVDKRLR
Sbjct: 122  KQLGKILLLNPRLISYSIDSKLTQIVDFLAALGLTKDGMIGKVLVKHPFIMGYSVDKRLR 181

Query: 965  PTSEFLKSIGLTELDLQRMAVNYPEVLCRDVEKILRPNCTFIKTCGFGDRQVATLVAGYP 1144
            PTSEFLKS+GLTELDLQ + +N+PEVLCRDV KIL+PN  +++ CGF DRQ+A LV GYP
Sbjct: 182  PTSEFLKSVGLTELDLQTVVMNFPEVLCRDVNKILKPNFAYLRRCGFNDRQIAALVTGYP 241

Query: 1145 PILIKSIRNSLEPRIRFLVEVMGRNINEVVDYPDFFRHGXXXXXXXXXXXXXXXNVGCSL 1324
            PILIKSIRNSLEPRI+FLVEVMGR I+EVVDYP+FF+HG                + CSL
Sbjct: 242  PILIKSIRNSLEPRIKFLVEVMGRQIDEVVDYPNFFQHGLKKTLESRHKLLKQRKLDCSL 301

Query: 1325 TEMLECNQKKFSDKF 1369
            +EML CNQKKF  K+
Sbjct: 302  SEMLGCNQKKFLMKY 316


>ref|XP_002328286.1| predicted protein [Populus trichocarpa] gi|222837801|gb|EEE76166.1|
            predicted protein [Populus trichocarpa]
          Length = 331

 Score =  465 bits (1197), Expect = e-128
 Identities = 221/319 (69%), Positives = 264/319 (82%)
 Frame = +2

Query: 419  NGSIVGFFRGRGFDDKNIHDMFKKCKRLQGAENERASENWDYLKSIGIEERKLPSVVLKC 598
            N S++ FFR RGFDD  IH+MF+KCKRLQ  + +RASENW YLK+IGI+ERKLPS++ KC
Sbjct: 8    NSSLLWFFRDRGFDDNTIHEMFRKCKRLQDTQRDRASENWAYLKTIGIQERKLPSIISKC 67

Query: 599  PRILTLGLNEKLVPMVQCLTTLAKKPSEVALVITKFPHILSHSVEEKLCPLLAFFEVLGV 778
            P+ILTLGLNEKL+PMV+CL TL  KP EVA  ITKFPHILSHSVEEKLCPLLAFF+ +GV
Sbjct: 68   PKILTLGLNEKLIPMVECLATLGSKPREVASAITKFPHILSHSVEEKLCPLLAFFQAIGV 127

Query: 779  PETQLGKLLFLNPRLISYSIELKLTQIVDFLASLGLNKEGMIGKVLLKNPFIMGYSVDKR 958
            PE QLG++L LNPRL+SYSI+ KL +IVDFLASLGL K+GMIGKVL+K+PFI GYSV+KR
Sbjct: 128  PEKQLGRILLLNPRLVSYSIDSKLKEIVDFLASLGLTKDGMIGKVLVKHPFITGYSVEKR 187

Query: 959  LRPTSEFLKSIGLTELDLQRMAVNYPEVLCRDVEKILRPNCTFIKTCGFGDRQVATLVAG 1138
            LRPTSEFLKS+GLTELDL+ + +N+PEVLCRDV KIL+PN  +++ CGF DRQ+A LV G
Sbjct: 188  LRPTSEFLKSVGLTELDLRTVVMNFPEVLCRDVNKILKPNFAYLRRCGFNDRQIAALVTG 247

Query: 1139 YPPILIKSIRNSLEPRIRFLVEVMGRNINEVVDYPDFFRHGXXXXXXXXXXXXXXXNVGC 1318
            YPPILIKS++NSLEPRI+FLVEVMGR I+EVVDYP FF+HG                + C
Sbjct: 248  YPPILIKSVKNSLEPRIKFLVEVMGRQIDEVVDYPSFFQHGLKKTLESRHKLLKQRKLDC 307

Query: 1319 SLTEMLECNQKKFSDKFDL 1375
            SL++ML CNQKKF  K+ L
Sbjct: 308  SLSDMLGCNQKKFLMKYAL 326


>ref|XP_002514392.1| conserved hypothetical protein [Ricinus communis]
            gi|223546489|gb|EEF47988.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 331

 Score =  456 bits (1174), Expect = e-126
 Identities = 220/324 (67%), Positives = 265/324 (81%), Gaps = 1/324 (0%)
 Frame = +2

Query: 407  SSPQNGS-IVGFFRGRGFDDKNIHDMFKKCKRLQGAENERASENWDYLKSIGIEERKLPS 583
            S+  NGS +  FFR +GFDDK+IH+MF+KCKRL+G + ERASENW YLKS+GI+ERKLP 
Sbjct: 3    STCSNGSSLTWFFRDKGFDDKSIHEMFRKCKRLEGLQRERASENWSYLKSVGIQERKLPC 62

Query: 584  VVLKCPRILTLGLNEKLVPMVQCLTTLAKKPSEVALVITKFPHILSHSVEEKLCPLLAFF 763
            V+ KCP+ILTLGLNEKL+PMV+CL+TLA +P +VA  ITKFPHILSHS+EEKLCPLLAF 
Sbjct: 63   VISKCPKILTLGLNEKLIPMVECLSTLATRPHDVASAITKFPHILSHSLEEKLCPLLAFL 122

Query: 764  EVLGVPETQLGKLLFLNPRLISYSIELKLTQIVDFLASLGLNKEGMIGKVLLKNPFIMGY 943
            + LG+ E QLGK++ LNPRLISYSIE KLT+IV FLA LGL+ +GMIGKVL+K+PFIMGY
Sbjct: 123  QALGISEKQLGKIILLNPRLISYSIESKLTEIVQFLAGLGLSGDGMIGKVLVKHPFIMGY 182

Query: 944  SVDKRLRPTSEFLKSIGLTELDLQRMAVNYPEVLCRDVEKILRPNCTFIKTCGFGDRQVA 1123
            SVDKRLRPTSEFLKS+GLTEL+LQ + +N+PEVLCRDV KIL+PN  ++K CGF DRQ+A
Sbjct: 183  SVDKRLRPTSEFLKSVGLTELNLQTVVMNFPEVLCRDVNKILQPNLAYLKRCGFQDRQIA 242

Query: 1124 TLVAGYPPILIKSIRNSLEPRIRFLVEVMGRNINEVVDYPDFFRHGXXXXXXXXXXXXXX 1303
             +V GYPPILIKSIRNSLEPRI+FLV++MGR I+E   YP+FF+H               
Sbjct: 243  VMVTGYPPILIKSIRNSLEPRIKFLVDIMGRTIDEAAAYPNFFQHSLKKTLESRHRLLKQ 302

Query: 1304 XNVGCSLTEMLECNQKKFSDKFDL 1375
              V CSL EML+CN+KKF  KF L
Sbjct: 303  KKVDCSLNEMLDCNEKKFLLKFGL 326


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