BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005340
         (1512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]        291   4e-76
ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea ma...   291   4e-76
ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [S...   287   4e-75
gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea m...   286   1e-74
gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea m...   286   1e-74

>gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]
          Length = 413

 Score =  291 bits (744), Expect = 4e-76
 Identities = 141/190 (74%), Positives = 166/190 (87%)
 Frame = -3

Query: 1321 SAGDDDRKHNHHDERGGSSSPGKIFVGGVSWDTTEENFTKHFEKYGEIIDSVIMKEKHTR 1142
            + G+D R     D  GG +S GKIFVGGV+W+TTEE FTKHF+KYG I DSVIMK+KHTR
Sbjct: 83   TGGEDGRDA---DSSGGDAS-GKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTR 138

Query: 1141 RPRGFGFITFSNPSVLDKVLEDEHIINGRTVEVKRTVPREDMEVKGSQKTKKIFVGGIPP 962
             PRGFGF+TFS+PSVLD+VLEDEH+I+GRTVEVKRTVP+E+M  K   KTKKIFVGGIPP
Sbjct: 139  MPRGFGFVTFSDPSVLDRVLEDEHVIDGRTVEVKRTVPKEEMSSKDGPKTKKIFVGGIPP 198

Query: 961  SITEDELKEYFSSYGNIVEQQIMLDHSSGRSRGFGFVTFESEEAVEQIINEDRTHELGGK 782
            S+TED+LKE+FSSYG +VE QIMLDHS+GRSRGFGFVTFESE+AVE++++E R H+LGGK
Sbjct: 199  SLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGK 258

Query: 781  QVEIKKAEPK 752
            QVEIKKAEPK
Sbjct: 259  QVEIKKAEPK 268


>ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea mays]
            gi|219884331|gb|ACL52540.1| unknown [Zea mays]
          Length = 413

 Score =  291 bits (744), Expect = 4e-76
 Identities = 141/190 (74%), Positives = 166/190 (87%)
 Frame = -3

Query: 1321 SAGDDDRKHNHHDERGGSSSPGKIFVGGVSWDTTEENFTKHFEKYGEIIDSVIMKEKHTR 1142
            + G+D R     D  GG +S GKIFVGGV+W+TTEE FTKHF+KYG I DSVIMK+KHTR
Sbjct: 83   TGGEDGRDA---DSSGGDAS-GKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTR 138

Query: 1141 RPRGFGFITFSNPSVLDKVLEDEHIINGRTVEVKRTVPREDMEVKGSQKTKKIFVGGIPP 962
             PRGFGF+TFS+PSVLD+VLEDEH+I+GRTVEVKRTVP+E+M  K   KTKKIFVGGIPP
Sbjct: 139  MPRGFGFVTFSDPSVLDRVLEDEHVIDGRTVEVKRTVPKEEMSSKDGPKTKKIFVGGIPP 198

Query: 961  SITEDELKEYFSSYGNIVEQQIMLDHSSGRSRGFGFVTFESEEAVEQIINEDRTHELGGK 782
            S+TED+LKE+FSSYG +VE QIMLDHS+GRSRGFGFVTFESE+AVE++++E R H+LGGK
Sbjct: 199  SLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGK 258

Query: 781  QVEIKKAEPK 752
            QVEIKKAEPK
Sbjct: 259  QVEIKKAEPK 268


>ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
            gi|241915398|gb|EER88542.1| hypothetical protein
            SORBIDRAFT_10g022380 [Sorghum bicolor]
          Length = 414

 Score =  287 bits (735), Expect = 4e-75
 Identities = 138/190 (72%), Positives = 163/190 (85%)
 Frame = -3

Query: 1321 SAGDDDRKHNHHDERGGSSSPGKIFVGGVSWDTTEENFTKHFEKYGEIIDSVIMKEKHTR 1142
            + G+D R      + GG  S GKIFVGGV+W+TTEE FTKHF+KYG I DSVIMK+KHTR
Sbjct: 82   AGGEDGRDA----DSGGGDSSGKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTR 137

Query: 1141 RPRGFGFITFSNPSVLDKVLEDEHIINGRTVEVKRTVPREDMEVKGSQKTKKIFVGGIPP 962
             PRGFGF+TFS+PSVLD+VLED H+I+GRTVEVKRTVP+E+M  K   KTKKIFVGGIP 
Sbjct: 138  MPRGFGFVTFSDPSVLDRVLEDAHVIDGRTVEVKRTVPKEEMSSKDGPKTKKIFVGGIPS 197

Query: 961  SITEDELKEYFSSYGNIVEQQIMLDHSSGRSRGFGFVTFESEEAVEQIINEDRTHELGGK 782
            S+TED+LKE+FSSYG +VE QIMLDHS+GRSRGFGFVTFESE+AVE++++E R H+LGGK
Sbjct: 198  SLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGK 257

Query: 781  QVEIKKAEPK 752
            QVEIKKAEPK
Sbjct: 258  QVEIKKAEPK 267


>gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
          Length = 384

 Score =  286 bits (732), Expect = 1e-74
 Identities = 135/179 (75%), Positives = 162/179 (90%), Gaps = 1/179 (0%)
 Frame = -3

Query: 1285 DERG-GSSSPGKIFVGGVSWDTTEENFTKHFEKYGEIIDSVIMKEKHTRRPRGFGFITFS 1109
            D RG G  S GKIFVGGV+W+TTEE+F+KHFEKYG I DSVIMK+KHT+ PRGFGF+TFS
Sbjct: 45   DGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFS 104

Query: 1108 NPSVLDKVLEDEHIINGRTVEVKRTVPREDMEVKGSQKTKKIFVGGIPPSITEDELKEYF 929
            +PSV+DKVLED+H+I+GRTVEVKRTVPRE+M  K   KT+KIF+GG+PPS+TEDELK++F
Sbjct: 105  DPSVIDKVLEDDHVIDGRTVEVKRTVPREEMITKDGPKTRKIFIGGLPPSLTEDELKDHF 164

Query: 928  SSYGNIVEQQIMLDHSSGRSRGFGFVTFESEEAVEQIINEDRTHELGGKQVEIKKAEPK 752
            SSYGN+VE QIMLDHS+GRSRGFGFVTFESE++VE++I+E R  +LGGKQVEIKKAEPK
Sbjct: 165  SSYGNVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 223



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 33/91 (36%), Positives = 50/91 (54%)
 Frame = -3

Query: 1024 EDMEVKGSQKTKKIFVGGIPPSITEDELKEYFSSYGNIVEQQIMLDHSSGRSRGFGFVTF 845
            ED    G     KIFVGG+    TE+   ++F  YG I +  IM D  +   RGFGFVTF
Sbjct: 44   EDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 103

Query: 844  ESEEAVEQIINEDRTHELGGKQVEIKKAEPK 752
                 +++++ +D  H + G+ VE+K+  P+
Sbjct: 104  SDPSVIDKVLEDD--HVIDGRTVEVKRTVPR 132


>gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
          Length = 443

 Score =  286 bits (731), Expect = 1e-74
 Identities = 134/179 (74%), Positives = 162/179 (90%), Gaps = 1/179 (0%)
 Frame = -3

Query: 1285 DERG-GSSSPGKIFVGGVSWDTTEENFTKHFEKYGEIIDSVIMKEKHTRRPRGFGFITFS 1109
            D RG G  S GKIFVGGV+W+TTEE+F+KHFEKYG I DSVIMK+KHT+ PRGFGF+TFS
Sbjct: 104  DGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFS 163

Query: 1108 NPSVLDKVLEDEHIINGRTVEVKRTVPREDMEVKGSQKTKKIFVGGIPPSITEDELKEYF 929
            +PSV+DKVLED+H+I+GRTVEVKRTVPRE+M  K   KT+KIF+GG+PPS+TEDELK++F
Sbjct: 164  DPSVIDKVLEDDHVIDGRTVEVKRTVPREEMITKDGPKTRKIFIGGLPPSLTEDELKDHF 223

Query: 928  SSYGNIVEQQIMLDHSSGRSRGFGFVTFESEEAVEQIINEDRTHELGGKQVEIKKAEPK 752
            SSYGN+VE QIMLDHS+GRSRGFGF+TFESE++VE++I+E R  +LGGKQVEIKKAEPK
Sbjct: 224  SSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 282



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 33/91 (36%), Positives = 50/91 (54%)
 Frame = -3

Query: 1024 EDMEVKGSQKTKKIFVGGIPPSITEDELKEYFSSYGNIVEQQIMLDHSSGRSRGFGFVTF 845
            ED    G     KIFVGG+    TE+   ++F  YG I +  IM D  +   RGFGFVTF
Sbjct: 103  EDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 162

Query: 844  ESEEAVEQIINEDRTHELGGKQVEIKKAEPK 752
                 +++++ +D  H + G+ VE+K+  P+
Sbjct: 163  SDPSVIDKVLEDD--HVIDGRTVEVKRTVPR 191