BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005303
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275043.1| PREDICTED: calvin cycle protein CP12-like [V...   117   3e-24
dbj|BAH03328.1| chloroplast protein 12 [Fagus crenata]                112   8e-23
emb|CAA96569.1| CP12 [Nicotiana tabacum] gi|25990286|gb|AAK49535...   108   1e-21
gb|ABK95858.1| unknown [Populus trichocarpa]                          107   3e-21
ref|XP_002302764.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20

>ref|XP_002275043.1| PREDICTED: calvin cycle protein CP12-like [Vitis vinifera]
          Length = 128

 Score =  117 bits (293), Expect = 3e-24
 Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
 Frame = -3

Query: 781 ATLAGVSLSSTAVVGKA-ESFRFQSLGSPCLNYPW-RLNHFKGGRMHVRTMAVPESTISD 608
           AT+AGVSLS+  V+ +A +S + Q++ SP L+ PW R + F  GRM VR +A    +IS+
Sbjct: 2   ATIAGVSLSTPRVLARAADSPKSQTIQSPWLSNPWKRPSRFGAGRMCVRPVAAAPDSISE 61

Query: 607 QVAKSIKDAQEACADDPVSGECXXXXXXXXXXXXXXXXERLKKKQTDSDPLETYCKDNPE 428
           +V +SIK+A+E C+DDP SGEC                 R KKK+  SDPLETYCKDNPE
Sbjct: 62  KVVESIKNAEEKCSDDPASGECVAAWDEVEELSAAASHARDKKKE--SDPLETYCKDNPE 119

Query: 427 TDECRTYED 401
            +ECRTYED
Sbjct: 120 DEECRTYED 128


>dbj|BAH03328.1| chloroplast protein 12 [Fagus crenata]
          Length = 130

 Score =  112 bits (281), Expect = 8e-23
 Identities = 64/131 (48%), Positives = 83/131 (63%), Gaps = 4/131 (3%)
 Frame = -3

Query: 781 ATLAGVSLSSTAVVGK-AESFRFQSLGSPCLNYPWR---LNHFKGGRMHVRTMAVPESTI 614
           AT+AG++LS+  V+ K A+S + Q++ SP L++ W+   L  + G  M VR ++     I
Sbjct: 2   ATIAGLNLSTPRVLAKSADSPKAQTIKSPWLSHSWKRPTLFGYAGRSMQVRPVSAAPEKI 61

Query: 613 SDQVAKSIKDAQEACADDPVSGECXXXXXXXXXXXXXXXXERLKKKQTDSDPLETYCKDN 434
           SD+VA+SIKDA+EACA DP SGEC                 R KKK   SDPLE YCKDN
Sbjct: 62  SDKVAESIKDAEEACAGDPASGECVAAWDEVEELSAAASHARDKKK--GSDPLEEYCKDN 119

Query: 433 PETDECRTYED 401
           PET+ECRTYED
Sbjct: 120 PETEECRTYED 130


>emb|CAA96569.1| CP12 [Nicotiana tabacum] gi|25990286|gb|AAK49535.2| chloroplast
           protein 12 [Nicotiana tabacum]
          Length = 132

 Score =  108 bits (271), Expect = 1e-21
 Identities = 58/132 (43%), Positives = 89/132 (67%), Gaps = 5/132 (3%)
 Frame = -3

Query: 781 ATLAGVSLSSTAVVGK-AESFRFQSLGSPCLNYPWR---LNHFKGGRMHVRTM-AVPEST 617
           A++AGVS+++  ++ K ++S + Q+L    LN PW+   L  F  G+++++ + A P++ 
Sbjct: 2   ASIAGVSITTPRILSKTSDSPKVQTLKFQSLNKPWKNSSLVQFGHGKLYLKAISATPDNK 61

Query: 616 ISDQVAKSIKDAQEACADDPVSGECXXXXXXXXXXXXXXXXERLKKKQTDSDPLETYCKD 437
           +SD VA+S+K+A+EACA++PVSGEC                 R KKK++ SDPLE YCKD
Sbjct: 62  LSDLVAESVKEAEEACAENPVSGECAAAWDVVEEASAAASHARDKKKES-SDPLENYCKD 120

Query: 436 NPETDECRTYED 401
           NPETDECRTY++
Sbjct: 121 NPETDECRTYDN 132


>gb|ABK95858.1| unknown [Populus trichocarpa]
          Length = 127

 Score =  107 bits (267), Expect = 3e-21
 Identities = 62/130 (47%), Positives = 79/130 (60%), Gaps = 3/130 (2%)
 Frame = -3

Query: 781 ATLAGVSLSSTAVVGKA-ESFRFQSLGSPCLNYPWRLNHF--KGGRMHVRTMAVPESTIS 611
           AT+AG++LS+  V+ KA +  + Q+L    LN PWR  +    GGRM +R +     +IS
Sbjct: 2   ATIAGLNLSTPRVLAKATDKPKAQALVK--LNQPWRRTYHLGSGGRMQIRPVRAAPDSIS 59

Query: 610 DQVAKSIKDAQEACADDPVSGECXXXXXXXXXXXXXXXXERLKKKQTDSDPLETYCKDNP 431
           ++V KSIKDA+ AC+DD  SGEC                 + KKK   SDPLE YCKDNP
Sbjct: 60  EKVEKSIKDAEAACSDDAASGECAAAWDEVEELSAAASHAKDKKK--GSDPLEEYCKDNP 117

Query: 430 ETDECRTYED 401
           ETDECRTYED
Sbjct: 118 ETDECRTYED 127


>ref|XP_002302764.1| predicted protein [Populus trichocarpa] gi|222844490|gb|EEE82037.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score =  105 bits (262), Expect = 1e-20
 Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 3/130 (2%)
 Frame = -3

Query: 781 ATLAGVSLSSTAVVGKA-ESFRFQSLGSPCLNYPWRLNHF--KGGRMHVRTMAVPESTIS 611
           A +AG++LS+  V+ KA +  + Q+L    LN PWR  +    GGRM +R +     +IS
Sbjct: 2   AAIAGLNLSTPRVLAKATDKPKAQALVK--LNQPWRRTYHLGSGGRMQIRPVRAAPDSIS 59

Query: 610 DQVAKSIKDAQEACADDPVSGECXXXXXXXXXXXXXXXXERLKKKQTDSDPLETYCKDNP 431
           ++V KSIKDA+ AC+DD  SGEC                 + KKK   SDPLE YCKDNP
Sbjct: 60  EKVEKSIKDAEAACSDDAASGECAAAWDEVEELSAAASHAKDKKK--GSDPLEEYCKDNP 117

Query: 430 ETDECRTYED 401
           ETDECRTYED
Sbjct: 118 ETDECRTYED 127