BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005301
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK01116.1| predicted protein [Hordeum vulgare subsp. vulgare]     44   3e-08
ref|XP_002869797.1| mitochondrial dihydroorotase [Arabidopsis ly...    43   6e-08
ref|NP_194024.1| dihydroorotase [Arabidopsis thaliana] gi|250003...    43   6e-08
gb|ABQ41358.1| mitochondrial dihydroorotase [Brassica napus]           43   6e-08
dbj|BAF00239.1| dihydroorotase [Arabidopsis thaliana]                  43   6e-08

>dbj|BAK01116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score = 44.3 bits (103), Expect(2) = 3e-08
 Identities = 21/26 (80%), Positives = 23/26 (88%)
 Frame = +3

Query: 3   SGVVFAVELYHAGATRNSQDGITQIL 80
           SGVVFAV+LY AGAT NSQDG+T IL
Sbjct: 131 SGVVFAVKLYPAGATTNSQDGVTDIL 156



 Score = 40.8 bits (94), Expect(2) = 3e-08
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +2

Query: 71  TDLIGSCLPVLKEMVKQNMPLL 136
           TD++G CLPVL+EMVKQ MPLL
Sbjct: 153 TDILGKCLPVLEEMVKQEMPLL 174


>ref|XP_002869797.1| mitochondrial dihydroorotase [Arabidopsis lyrata subsp. lyrata]
           gi|297315633|gb|EFH46056.1| mitochondrial dihydroorotase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score = 43.1 bits (100), Expect(2) = 6e-08
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +2

Query: 71  TDLIGSCLPVLKEMVKQNMPLL 136
           TDL G CLPVL+EMVKQNMPLL
Sbjct: 146 TDLFGKCLPVLEEMVKQNMPLL 167



 Score = 40.8 bits (94), Expect(2) = 6e-08
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = +3

Query: 3   SGVVFAVELYHAGATRNSQDGITQI 77
           SGVV+AV+LY AGAT NSQDG+T +
Sbjct: 124 SGVVYAVKLYPAGATTNSQDGVTDL 148


>ref|NP_194024.1| dihydroorotase [Arabidopsis thaliana]
           gi|2500036|sp|O04904.1|PYRC_ARATH RecName:
           Full=Dihydroorotase, mitochondrial; Short=DHOase; Flags:
           Precursor gi|2121273|gb|AAB71134.1| dihydroorotase
           [Arabidopsis thaliana] gi|3292818|emb|CAA19808.1|
           dihydroorotase [Arabidopsis thaliana]
           gi|7269140|emb|CAB79248.1| dihydroorotase [Arabidopsis
           thaliana] gi|332659282|gb|AEE84682.1| dihydroorotase
           [Arabidopsis thaliana]
          Length = 377

 Score = 43.1 bits (100), Expect(2) = 6e-08
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +2

Query: 71  TDLIGSCLPVLKEMVKQNMPLL 136
           TDL G CLPVL+EMVKQNMPLL
Sbjct: 145 TDLFGKCLPVLEEMVKQNMPLL 166



 Score = 40.8 bits (94), Expect(2) = 6e-08
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = +3

Query: 3   SGVVFAVELYHAGATRNSQDGITQI 77
           SGVV+AV+LY AGAT NSQDG+T +
Sbjct: 123 SGVVYAVKLYPAGATTNSQDGVTDL 147


>gb|ABQ41358.1| mitochondrial dihydroorotase [Brassica napus]
          Length = 374

 Score = 43.1 bits (100), Expect(2) = 6e-08
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +2

Query: 71  TDLIGSCLPVLKEMVKQNMPLL 136
           TDL G CLPVL+EMVKQNMPLL
Sbjct: 148 TDLFGKCLPVLEEMVKQNMPLL 169



 Score = 40.8 bits (94), Expect(2) = 6e-08
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = +3

Query: 3   SGVVFAVELYHAGATRNSQDGITQI 77
           SGVV+AV+LY AGAT NSQDG+T +
Sbjct: 126 SGVVYAVKLYPAGATTNSQDGVTDL 150


>dbj|BAF00239.1| dihydroorotase [Arabidopsis thaliana]
          Length = 366

 Score = 43.1 bits (100), Expect(2) = 6e-08
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +2

Query: 71  TDLIGSCLPVLKEMVKQNMPLL 136
           TDL G CLPVL+EMVKQNMPLL
Sbjct: 134 TDLFGKCLPVLEEMVKQNMPLL 155



 Score = 40.8 bits (94), Expect(2) = 6e-08
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = +3

Query: 3   SGVVFAVELYHAGATRNSQDGITQI 77
           SGVV+AV+LY AGAT NSQDG+T +
Sbjct: 112 SGVVYAVKLYPAGATTNSQDGVTDL 136