BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005300
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275482.1| PREDICTED: nuclear transcription factor Y su...   149   3e-34
ref|XP_002312821.1| predicted protein [Populus trichocarpa] gi|1...   143   2e-32
ref|XP_004140162.1| PREDICTED: DNA polymerase epsilon subunit 3-...   139   3e-31
gb|AFK49654.1| nuclear transcription factor Y subunit B4 [Medica...   139   4e-31
dbj|BAD46214.1| hypothetical protein [Oryza sativa Japonica Grou...   136   2e-30

>ref|XP_002275482.1| PREDICTED: nuclear transcription factor Y subunit B-8 [Vitis
           vinifera] gi|296084907|emb|CBI28316.3| unnamed protein
           product [Vitis vinifera]
          Length = 193

 Score =  149 bits (377), Expect = 3e-34
 Identities = 86/120 (71%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = -2

Query: 501 MAVA-VEELPKAIVRRVVKDKLSNQSTNEQGDSVAIHKDALLAFSESARIFIHYLSATAN 325
           +AVA VEELPK IVRRVVKDKLS  S  + GD + IHKD L AF ESARIFIHYLSATAN
Sbjct: 4   VAVAEVEELPKTIVRRVVKDKLSQFS--DDGD-IIIHKDGLRAFCESARIFIHYLSATAN 60

Query: 324 DICKESKRQTINADDVLKAIEEIEFPEFVGPLKASLDDFRWXXXXXXXXXXXXNETKKRK 145
           D+CKES+RQTINADDVLKAIEEIEFPEFV PLKASLD+FR              E KKRK
Sbjct: 61  DLCKESRRQTINADDVLKAIEEIEFPEFVQPLKASLDEFRKKNAGKKAGAAKSKEAKKRK 120


>ref|XP_002312821.1| predicted protein [Populus trichocarpa] gi|118484583|gb|ABK94165.1|
           unknown [Populus trichocarpa]
           gi|222849229|gb|EEE86776.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  143 bits (361), Expect = 2e-32
 Identities = 73/94 (77%), Positives = 81/94 (86%)
 Frame = -2

Query: 486 EELPKAIVRRVVKDKLSNQSTNEQGDSVAIHKDALLAFSESARIFIHYLSATANDICKES 307
           EELPKAIVRRVVKD LS  S  +    + +HKDALLAFSESARIFIHYLSATANDICKES
Sbjct: 11  EELPKAIVRRVVKDTLSRCSPEDS--DINVHKDALLAFSESARIFIHYLSATANDICKES 68

Query: 306 KRQTINADDVLKAIEEIEFPEFVGPLKASLDDFR 205
           KRQT+NADDV KA+E+IEFPEFVGPLK SL +F+
Sbjct: 69  KRQTMNADDVFKALEDIEFPEFVGPLKVSLSEFK 102


>ref|XP_004140162.1| PREDICTED: DNA polymerase epsilon subunit 3-like [Cucumis sativus]
          Length = 160

 Score =  139 bits (351), Expect = 3e-31
 Identities = 74/118 (62%), Positives = 90/118 (76%)
 Frame = -2

Query: 486 EELPKAIVRRVVKDKLSNQSTNEQGDSVAIHKDALLAFSESARIFIHYLSATANDICKES 307
           EELPK IVRRVVK+KLS  S ++    ++++KD+LLAF ESARIFIHYLSATANDICKES
Sbjct: 10  EELPKTIVRRVVKEKLSQCSRDQD---ISVNKDSLLAFCESARIFIHYLSATANDICKES 66

Query: 306 KRQTINADDVLKAIEEIEFPEFVGPLKASLDDFRWXXXXXXXXXXXXNETKKRKVVEK 133
           KRQTI A+DVLKA+E++EFPE V PLKASLD+FR              E KK++ VE+
Sbjct: 67  KRQTIKAEDVLKALEDMEFPELVRPLKASLDEFRRKNAGKKAAASREKEAKKKRKVEE 124


>gb|AFK49654.1| nuclear transcription factor Y subunit B4 [Medicago truncatula]
          Length = 140

 Score =  139 bits (349), Expect = 4e-31
 Identities = 73/94 (77%), Positives = 82/94 (87%)
 Frame = -2

Query: 486 EELPKAIVRRVVKDKLSNQSTNEQGDSVAIHKDALLAFSESARIFIHYLSATANDICKES 307
           EELPK IVRRVVK+KLS  S  + GD +A+HKDALLAFSESARIFIHYLSATANDIC+ES
Sbjct: 5   EELPKTIVRRVVKEKLSTCS--DDGD-IAVHKDALLAFSESARIFIHYLSATANDICRES 61

Query: 306 KRQTINADDVLKAIEEIEFPEFVGPLKASLDDFR 205
           KRQ INA+DV KA+EE EF EFVGPLK SL++FR
Sbjct: 62  KRQIINAEDVFKALEETEFAEFVGPLKDSLEEFR 95


>dbj|BAD46214.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|222642131|gb|EEE70263.1| hypothetical protein
           OsJ_30397 [Oryza sativa Japonica Group]
          Length = 167

 Score =  136 bits (343), Expect = 2e-30
 Identities = 77/137 (56%), Positives = 97/137 (70%), Gaps = 4/137 (2%)
 Frame = -2

Query: 540 HTERERE---MASKVPMAVA-VEELPKAIVRRVVKDKLSNQSTNEQGDSVAIHKDALLAF 373
           H++ E++    A+   MA A VEELPKAIVRR+VK+KL+  +    G  V ++KDA+ AF
Sbjct: 12  HSQPEKQPGQAAAAASMAEAEVEELPKAIVRRLVKEKLAQVAAG--GAEVIVNKDAMSAF 69

Query: 372 SESARIFIHYLSATANDICKESKRQTINADDVLKAIEEIEFPEFVGPLKASLDDFRWXXX 193
           +ESARIFIHYLSATAND+CKESKRQTINADDVLKA++E+EFPEFV PL  SL +FR    
Sbjct: 70  AESARIFIHYLSATANDMCKESKRQTINADDVLKALDEMEFPEFVEPLNTSLQEFRNKNA 129

Query: 192 XXXXXXXXXNETKKRKV 142
                       K+RK+
Sbjct: 130 ARRSETTQKKAEKRRKI 146