BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005296
         (1696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]   602   e-169
ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   598   e-168
ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   564   e-158
ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putativ...   561   e-157
ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|2...   535   e-149

>emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
          Length = 592

 Score =  602 bits (1551), Expect = e-169
 Identities = 307/461 (66%), Positives = 361/461 (78%)
 Frame = +3

Query: 27   KKMDEEEIPIDENFPLFSKRSKPILTPTSNSQTPISHIPKALEXXXXXXXXXXXXXXXXX 206
            KKMDEE + +DENFPLFSKR KP   P+ NS T   + P   +                 
Sbjct: 102  KKMDEETL-VDENFPLFSKR-KPTPKPSKNSTTTAQN-PNPEQPLTRTTNPTSPSSTFAD 158

Query: 207  LNLSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQKLAE 386
            L L++WA++ CKELG+++PTPVQ HCIP+ILAG+DVLGLA+TGSGKTAAFALPIL +LAE
Sbjct: 159  LGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLAE 218

Query: 387  NRYGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIA 566
            + +GV+ALV+TPTRELA+QLA+QF+ALGS L LRC+V+VGGMDMI Q + LM RPHV+IA
Sbjct: 219  DPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVIA 278

Query: 567  TPGRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSA 746
            TPGR+KVL+EQNPDI AVF RTKFLVLDEADRVLDVGFEEELRV+F+CLP+NRQTLLFSA
Sbjct: 279  TPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSA 338

Query: 747  TMTENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGI 926
            TMT +LQTLLELS+NKAYFY+AYEG +TVESLKQQY+F+P+N+KDVYLLHILSKME+MGI
Sbjct: 339  TMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMGI 398

Query: 927  RSAIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPVLLATDVA 1106
            RSAI+FVS C++C                         RL+A+ RFKSGQVP+LLATDVA
Sbjct: 399  RSAIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDVA 458

Query: 1107 SRGLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTK 1286
            SRGLDIPTVDLV+NYDIPR+  DY                 S+VTQNDVDLIHEIEA   
Sbjct: 459  SRGLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLG 518

Query: 1287 KQLEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAK 1409
            KQL+KF+CKE EVL NITKVYKARR++ MKM DDGFEEKAK
Sbjct: 519  KQLDKFDCKEKEVLDNITKVYKARRVATMKMMDDGFEEKAK 559


>ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
            vinifera] gi|297736137|emb|CBI24175.3| unnamed protein
            product [Vitis vinifera]
          Length = 489

 Score =  598 bits (1541), Expect = e-168
 Identities = 305/459 (66%), Positives = 359/459 (78%)
 Frame = +3

Query: 33   MDEEEIPIDENFPLFSKRSKPILTPTSNSQTPISHIPKALEXXXXXXXXXXXXXXXXXLN 212
            MDEE + +DENFPLFSKR KP   P+ NS T   + P   +                 L 
Sbjct: 1    MDEETL-VDENFPLFSKR-KPTPKPSKNSTTTAQN-PNPEQPLTRTTNPTSPSSTFADLG 57

Query: 213  LSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQKLAENR 392
            L++WA++ CKELG+++PTPVQ HCIP+ILAG+DVLGLA+TGSGKTAAFALPIL +LAE+ 
Sbjct: 58   LAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLAEDP 117

Query: 393  YGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIATP 572
            +GV+ALV+TPTRELA+QLA+QF+ALGS L LRC+V+VGGMDMI Q + LM RPHV+IATP
Sbjct: 118  FGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVIATP 177

Query: 573  GRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSATM 752
            GR+KVL+EQNPDI AVF RTKFLVLDEADRVLDVGFEEELRV+F+CLP+NRQTLLFSATM
Sbjct: 178  GRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATM 237

Query: 753  TENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGIRS 932
            T +LQTLLELS+NKAYFY+AYEG +TVESLKQQY+F+P+N+KDVYLLHILSKME+MGIRS
Sbjct: 238  TSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMGIRS 297

Query: 933  AIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPVLLATDVASR 1112
            AI+FVS C++C                         RL+A+ RFKSGQVP+LLATDVASR
Sbjct: 298  AIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDVASR 357

Query: 1113 GLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTKKQ 1292
            GLDIPTVDLV+NYDIPR+  DY                 S+VTQNDVDLIHEIEA   KQ
Sbjct: 358  GLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLGKQ 417

Query: 1293 LEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAK 1409
            L+KF+CKE EVL NITKVYKARR++ MKM DDGFEEKAK
Sbjct: 418  LDKFDCKEKEVLDNITKVYKARRVATMKMMDDGFEEKAK 456


>ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
            sativus] gi|449475871|ref|XP_004154575.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
            sativus]
          Length = 491

 Score =  564 bits (1454), Expect = e-158
 Identities = 291/461 (63%), Positives = 344/461 (74%), Gaps = 3/461 (0%)
 Frame = +3

Query: 39   EEEIPIDENFPLFSKRSKPILTPTSNSQTPISHIPKA---LEXXXXXXXXXXXXXXXXXL 209
            ++E+ +D NFPLFSK  +    P+ N     +  PK    +E                 L
Sbjct: 2    DQEVIVDRNFPLFSKPHRKKHKPSENPTAVPNVAPKKSLQIEKSTELTTKSTNNITFADL 61

Query: 210  NLSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQKLAEN 389
             LS+W ++TCKEL +KKPT VQ HCIPKILAG DVLG+A+TGSGKTAAFALPILQ+L+E 
Sbjct: 62   GLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSET 121

Query: 390  RYGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIAT 569
             +GV+ALV+TPTRELA+QLA+QF+ALGS L+LRCSV+VGGMDM+ Q + L+ RPH++IAT
Sbjct: 122  PFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIAT 181

Query: 570  PGRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSAT 749
            PGRIKVL+E NPDI  VF +TKFLVLDEADRVLDVGFEEEL+VIF+CLP NRQTLLFSAT
Sbjct: 182  PGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSAT 241

Query: 750  MTENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGIR 929
            MT++L+TL +LSANKAYFY+AYEG +TV+ LKQQY+FIP+++KD+YLLH+LSKMEDMGIR
Sbjct: 242  MTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGIR 301

Query: 930  SAIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPVLLATDVAS 1109
            SAI+FV  CK+C                         RL+AL RFKSG+VPVLLATDVAS
Sbjct: 302  SAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGRVPVLLATDVAS 361

Query: 1110 RGLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTKK 1289
            RGLDIPTVDLVINYDIPR   DY                 S +TQNDV LIHEIEAN  K
Sbjct: 362  RGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEANLGK 421

Query: 1290 QLEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAKE 1412
            QLE FECKENEVL NITKVYKAR ++ MKM D GFEEK KE
Sbjct: 422  QLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKE 462


>ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223547266|gb|EEF48761.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 502

 Score =  561 bits (1445), Expect = e-157
 Identities = 284/469 (60%), Positives = 351/469 (74%), Gaps = 9/469 (1%)
 Frame = +3

Query: 33   MDEEEIPIDENFPLF---SKRSKPILT------PTSNSQTPISHIPKALEXXXXXXXXXX 185
            M++EEI +++NFPLF   SK  KP+ T      P + ++      PK  +          
Sbjct: 1    MEQEEIQVEKNFPLFFKPSKTHKPLQTIKPPKAPKTQNRKNDLETPKIEKEKSTNSITMD 60

Query: 186  XXXXXXXLNLSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALP 365
                   L L++WA+ TCKELG+K+PTPVQ HCIPKIL G DVLGLA+TGSGKTA FALP
Sbjct: 61   ETSLFSNLGLAEWAVRTCKELGMKRPTPVQAHCIPKILEGKDVLGLAQTGSGKTATFALP 120

Query: 366  ILQKLAENRYGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMS 545
            IL +LAE+ YG++ALVITPTRELA+QLA+QF+ALGS L+LRC+V+VGGMD + Q K LM+
Sbjct: 121  ILHRLAEDPYGIFALVITPTRELAYQLAEQFRALGSCLNLRCAVVVGGMDKLTQAKTLMA 180

Query: 546  RPHVIIATPGRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENR 725
            RPHV+IATPGR+KVL+E NPDI +VF +TKFLVLDEADRVLDVGFE+ELRV+F+CLP+NR
Sbjct: 181  RPHVVIATPGRVKVLLEDNPDIPSVFSKTKFLVLDEADRVLDVGFEDELRVVFQCLPKNR 240

Query: 726  QTLLFSATMTENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILS 905
            QTLLFSATMT NL++LLE+SANKAYFY+AYEG +TV++LKQQY+ +P+N+KDVYL++ILS
Sbjct: 241  QTLLFSATMTSNLESLLEVSANKAYFYEAYEGFKTVDTLKQQYVLVPKNVKDVYLVYILS 300

Query: 906  KMEDMGIRSAIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPV 1085
            KMEDMGIRSAI+FVS C+TC                         RLSAL+RFKSGQ  +
Sbjct: 301  KMEDMGIRSAIIFVSTCRTCYLLSLLLEELEKEPAALHSFKSQSLRLSALRRFKSGQASI 360

Query: 1086 LLATDVASRGLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIH 1265
            L+ATDVASRGLDIPTVDLV+NYD+PR+  DY                 S ++QND  LI 
Sbjct: 361  LIATDVASRGLDIPTVDLVVNYDLPRYPRDYVHRVGRTARAGRGGLAMSFISQNDFVLIR 420

Query: 1266 EIEANTKKQLEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAKE 1412
            EIEA   KQL +FECKENEVL++ITK++KAR ++ MKM DDGFEEK KE
Sbjct: 421  EIEAVLGKQLGEFECKENEVLSDITKIFKARHVATMKMLDDGFEEKEKE 469


>ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|222851113|gb|EEE88660.1|
            predicted protein [Populus trichocarpa]
          Length = 496

 Score =  535 bits (1377), Expect = e-149
 Identities = 283/468 (60%), Positives = 339/468 (72%), Gaps = 6/468 (1%)
 Frame = +3

Query: 27   KKMDEEEIPIDENFPLFSKRSK-PILTPTSN-SQTPISHIPK----ALEXXXXXXXXXXX 188
            ++  E+   +D NFPLFSK  K P L  T N  ++P   IPK    A             
Sbjct: 3    EQQQEKTHVVDSNFPLFSKTPKRPKLQKTQNPDESP--EIPKLEKEASSNPSNPDSAAAK 60

Query: 189  XXXXXXLNLSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPI 368
                  L LS+WAL+TCKELG+K PT VQ HCIPKIL+G DVLGLA+TGSGKTAAFALPI
Sbjct: 61   TTLFSDLGLSEWALQTCKELGMKNPTQVQSHCIPKILSGRDVLGLAQTGSGKTAAFALPI 120

Query: 369  LQKLAENRYGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSR 548
            L +LAE+ +GV+ALVITPTRELA+QLA+QF+A GS L LRC+V+VGGMD++ Q K LM R
Sbjct: 121  LHRLAEDPFGVFALVITPTRELAYQLAEQFRAFGSCLHLRCAVVVGGMDLLTQAKTLMGR 180

Query: 549  PHVIIATPGRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQ 728
            PHV+IATPGRIKVL+E NPDI  VF RTKFLVLDEADR++DVGF+EELRV+FKCLP++RQ
Sbjct: 181  PHVVIATPGRIKVLLE-NPDISPVFSRTKFLVLDEADRLIDVGFQEELRVVFKCLPKSRQ 239

Query: 729  TLLFSATMTENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSK 908
            TLLFSATMT  LQTLLELS NKAYFY+ YEG +TV++L QQY+ +P+N+K+VYL++ILSK
Sbjct: 240  TLLFSATMTSELQTLLELSENKAYFYEEYEGFKTVDTLNQQYIQMPKNVKEVYLVYILSK 299

Query: 909  MEDMGIRSAIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPVL 1088
            ME+MGIRSAI+FVS C TC                         RL++L RFKSGQ  +L
Sbjct: 300  MEEMGIRSAIIFVSACSTCRLLSSLLKELDHEPATLYSLESQSARLASLHRFKSGQASIL 359

Query: 1089 LATDVASRGLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHE 1268
            +ATD+ASRGLDIPTVDLVINYD+PR   DY                 SLV Q+D  L+  
Sbjct: 360  IATDLASRGLDIPTVDLVINYDLPRDPTDYVHRVGRTARAGREGLAVSLVAQHDGKLMKA 419

Query: 1269 IEANTKKQLEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAKE 1412
            IEA   KQ EKFECKENEVL++ITKVYKARR++ MKM DDGF+E  KE
Sbjct: 420  IEAEVGKQFEKFECKENEVLSDITKVYKARRVAKMKMMDDGFDELVKE 467