BLASTX nr result

ID: Coptis25_contig00005291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005291
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873121.1| glutaredoxin family protein [Arabidopsis lyr...    82   4e-14
gb|ABY79171.1| At5g03870-like protein [Arabidopsis lyrata]             82   4e-14
gb|ABY79168.1| At5g03870 [Arabidopsis thaliana]                        80   1e-13
gb|ABY79158.1| At5g03870 [Arabidopsis thaliana] gi|166065029|gb|...    80   1e-13
ref|XP_002266905.1| PREDICTED: uncharacterized protein LOC100247...    80   2e-13

>ref|XP_002873121.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318958|gb|EFH49380.1| glutaredoxin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 387

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 7/101 (6%)
 Frame = -2

Query: 284 EMLLETFPKKCPPGGKNSVVLYTSL-----DVMGDTNRVRSTFQNLQINYSLRDV-INPA 123
           E +LE FP+KCPPGG+NSVV+Y +          D N VRS   + ++ +S RDV ++  
Sbjct: 224 ERILEKFPEKCPPGGENSVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSV 283

Query: 122 YEEELRNLLG-ELAELPALFVQGRYIGGTNAVQKLNKEGKL 3
           ++EE+R ++G +  ++PA+FV+GR +G    V KL +EGKL
Sbjct: 284 FKEEIRGIMGTKHVKIPAVFVKGRMLGSVEEVMKLEEEGKL 324


>gb|ABY79171.1| At5g03870-like protein [Arabidopsis lyrata]
          Length = 375

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 7/101 (6%)
 Frame = -2

Query: 284 EMLLETFPKKCPPGGKNSVVLYTSL-----DVMGDTNRVRSTFQNLQINYSLRDV-INPA 123
           E +LE FP+KCPPGG+NSVV+Y +          D N VRS   + ++ +S RDV ++  
Sbjct: 214 ERILEKFPEKCPPGGENSVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSV 273

Query: 122 YEEELRNLLG-ELAELPALFVQGRYIGGTNAVQKLNKEGKL 3
           ++EE+R ++G +  ++PA+FV+GR +G    V KL +EGKL
Sbjct: 274 FKEEIRGIMGTKHVKIPAVFVKGRMLGSVEEVMKLEEEGKL 314


>gb|ABY79168.1| At5g03870 [Arabidopsis thaliana]
          Length = 368

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/101 (41%), Positives = 66/101 (65%), Gaps = 7/101 (6%)
 Frame = -2

Query: 284 EMLLETFPKKCPPGGKNSVVLYTSL-----DVMGDTNRVRSTFQNLQINYSLRDV-INPA 123
           E +LE FP+KCPPGG++SVV+Y +          D N VRS   + ++ +S RDV ++  
Sbjct: 207 ERILEKFPEKCPPGGEHSVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSV 266

Query: 122 YEEELRNLLG-ELAELPALFVQGRYIGGTNAVQKLNKEGKL 3
           ++EE+R ++G +  ++PA+FV+GR +G    V KL +EGKL
Sbjct: 267 FKEEIRGIMGTKHVKIPAVFVKGRMVGSVEEVMKLEEEGKL 307


>gb|ABY79158.1| At5g03870 [Arabidopsis thaliana] gi|166065029|gb|ABY79159.1|
           At5g03870 [Arabidopsis thaliana]
           gi|166065031|gb|ABY79160.1| At5g03870 [Arabidopsis
           thaliana] gi|166065035|gb|ABY79162.1| At5g03870
           [Arabidopsis thaliana] gi|166065043|gb|ABY79166.1|
           At5g03870 [Arabidopsis thaliana]
           gi|166065049|gb|ABY79169.1| At5g03870 [Arabidopsis
           thaliana] gi|166065051|gb|ABY79170.1| At5g03870
           [Arabidopsis thaliana]
          Length = 368

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/101 (41%), Positives = 66/101 (65%), Gaps = 7/101 (6%)
 Frame = -2

Query: 284 EMLLETFPKKCPPGGKNSVVLYTSL-----DVMGDTNRVRSTFQNLQINYSLRDV-INPA 123
           E +LE FP+KCPPGG++SVV+Y +          D N VRS   + ++ +S RDV ++  
Sbjct: 207 ERILEKFPEKCPPGGEHSVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSV 266

Query: 122 YEEELRNLLG-ELAELPALFVQGRYIGGTNAVQKLNKEGKL 3
           ++EE+R ++G +  ++PA+FV+GR +G    V KL +EGKL
Sbjct: 267 FKEEIRGIMGTKHVKIPAVFVKGRMVGSVEEVMKLEEEGKL 307


>ref|XP_002266905.1| PREDICTED: uncharacterized protein LOC100247840 [Vitis vinifera]
          Length = 371

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 6/97 (6%)
 Frame = -2

Query: 275 LETFPKKCPPGGKNSVVLYTSL-----DVMGDTNRVRSTFQNLQINYSLRDV-INPAYEE 114
           L  +P+KCPPGG +S+VLYT+          D NR+RS  ++ ++ +  RDV ++  + +
Sbjct: 213 LSEYPEKCPPGGADSLVLYTTSLGGVRRTYEDCNRLRSVLESHRVVFDERDVSLHGEFLK 272

Query: 113 ELRNLLGELAELPALFVQGRYIGGTNAVQKLNKEGKL 3
           ELR LLGE + +P LFV+GRY+GG   V +LN+ G+L
Sbjct: 273 ELRELLGEESSVPRLFVKGRYVGGVEEVVELNEWGRL 309


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