BLASTX nr result

ID: Coptis25_contig00005290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005290
         (930 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|2...   109   8e-22
ref|XP_004138371.1| PREDICTED: vegetative incompatibility protei...   108   2e-21
ref|XP_004162166.1| PREDICTED: vegetative incompatibility protei...   108   2e-21
gb|ABS32230.1| transducin family protein [Carica papaya] gi|1645...   102   1e-19
ref|XP_002327217.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-19

>ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|222862888|gb|EEF00395.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  109 bits (273), Expect = 8e-22
 Identities = 54/83 (65%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
 Frame = -3

Query: 541 SC-PTIETLVATGG--DMGFLWSIGQGDQPHELLGHSNSITSLAFSADGKLLASGSFDGL 371
           SC PT   LVATGG  D GFLW IG GD   EL GH +S++ LAFS+DG+LLASG FDGL
Sbjct: 67  SCSPTDPLLVATGGGDDKGFLWKIGLGDWASELKGHKDSVSCLAFSSDGQLLASGGFDGL 126

Query: 370 VQVWDAYSGSHKCTLAGPSDGVE 302
           VQ+WDA SG+HKC L GP +G+E
Sbjct: 127 VQIWDASSGNHKCVLEGPDEGIE 149


>ref|XP_004138371.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis
           sativus]
          Length = 392

 Score =  108 bits (270), Expect = 2e-21
 Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
 Frame = -3

Query: 535 PTIETLVATGG--DMGFLWSIGQGDQPHELLGHSNSITSLAFSADGKLLASGSFDGLVQV 362
           P   TLVATGG  D GF+W IG+GD   EL GH +S++SLAFSADG+LLASGSFDG++Q+
Sbjct: 72  PVDATLVATGGGDDKGFMWKIGRGDFAQELSGHKDSVSSLAFSADGQLLASGSFDGIIQI 131

Query: 361 WDAYSGSHKCTLAGPSDGVE 302
           WD  SG+ KCTL GP  G+E
Sbjct: 132 WDTSSGNLKCTLEGPGGGIE 151


>ref|XP_004162166.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis
           sativus]
          Length = 392

 Score =  108 bits (269), Expect = 2e-21
 Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
 Frame = -3

Query: 535 PTIETLVATGG--DMGFLWSIGQGDQPHELLGHSNSITSLAFSADGKLLASGSFDGLVQV 362
           P   TLVATGG  D GF+W IG+GD   EL GH +S++SLAFSADG+LLASGSFDG++Q+
Sbjct: 72  PLDATLVATGGGDDKGFMWKIGRGDFAQELSGHKDSVSSLAFSADGQLLASGSFDGIIQI 131

Query: 361 WDAYSGSHKCTLAGPSDGVE 302
           WD  SG+ KCTL GP  G+E
Sbjct: 132 WDTSSGNLKCTLEGPGGGIE 151


>gb|ABS32230.1| transducin family protein [Carica papaya]
           gi|164522082|gb|ABY60781.1| transducin family protein
           [Carica papaya]
          Length = 408

 Score =  102 bits (255), Expect = 1e-19
 Identities = 50/80 (62%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
 Frame = -3

Query: 535 PTIETLVATGG--DMGFLWSIGQGDQPHELLGHSNSITSLAFSADGKLLASGSFDGLVQV 362
           PT   LVATGG  D GFLW IG+GD   ELLGH +S++ LAFS DG+ LASG  DGLVQ+
Sbjct: 70  PTDARLVATGGGDDKGFLWKIGRGDWGSELLGHKDSVSCLAFSTDGQFLASGGLDGLVQI 129

Query: 361 WDAYSGSHKCTLAGPSDGVE 302
           WDA SG+ KC L GP  G+E
Sbjct: 130 WDASSGNIKCALEGPEKGIE 149


>ref|XP_002327217.1| predicted protein [Populus trichocarpa] gi|222835587|gb|EEE74022.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  102 bits (253), Expect = 2e-19
 Identities = 49/80 (61%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
 Frame = -3

Query: 535 PTIETLVATGG--DMGFLWSIGQGDQPHELLGHSNSITSLAFSADGKLLASGSFDGLVQV 362
           P    LVATGG  D GFLW IG GD   EL GH  S++SL FS+DG+LLASG FDG+VQ+
Sbjct: 58  PADPLLVATGGGDDKGFLWKIGLGDWAAELKGHKESVSSLTFSSDGQLLASGGFDGIVQI 117

Query: 361 WDAYSGSHKCTLAGPSDGVE 302
           WDA SG+ KC L GP +G+E
Sbjct: 118 WDASSGNLKCVLEGPDEGIE 137


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