BLASTX nr result

ID: Coptis25_contig00005287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005287
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630693.1| Derlin-1 [Medicago truncatula] gi|355524715|...   380   e-103
ref|XP_003530537.1| PREDICTED: derlin-1-like [Glycine max]            371   e-100
ref|XP_003525291.1| PREDICTED: derlin-1-like [Glycine max]            370   e-100
ref|XP_004135679.1| PREDICTED: derlin-1-like [Cucumis sativus] g...   368   1e-99
ref|XP_002275238.1| PREDICTED: derlin-1 [Vitis vinifera] gi|2960...   364   2e-98

>ref|XP_003630693.1| Derlin-1 [Medicago truncatula] gi|355524715|gb|AET05169.1| Derlin-1
           [Medicago truncatula] gi|388496922|gb|AFK36527.1|
           unknown [Medicago truncatula]
          Length = 245

 Score =  380 bits (976), Expect = e-103
 Identities = 180/245 (73%), Positives = 209/245 (85%), Gaps = 5/245 (2%)
 Frame = +2

Query: 2   SSPSEFYNSLPPISKAYGTVCFLATAAYQLGIYNPFHIALIHELVFSRFQLWRLFTNFFF 181
           SSP EFY SLPPISKAYGT C +ATA YQLG+YNP HIAL++E VF RFQ+WRLFTNFFF
Sbjct: 2   SSPGEFYKSLPPISKAYGTACLVATAVYQLGLYNPVHIALLYERVFFRFQVWRLFTNFFF 61

Query: 182 LGPFSVNFAIRLLMIARYGVQVERGPFDRRPADFLWMMFFGAFSMLIFSAIPWFRSPFLG 361
           LGPFS+NF IRLLMI RYGVQ+E+GPFDRR ADFLWMM FGAF++L+ SAIP+F +PFL 
Sbjct: 62  LGPFSINFGIRLLMIVRYGVQLEKGPFDRRTADFLWMMIFGAFALLVLSAIPFFWTPFLA 121

Query: 362 VSLVFMLVYVWSREFPNAKVNIYGLVTLRAFYLPWAMLALDAIFGSSPMPDLLGILAGHL 541
           +SLVFML+YVWSREFPNA++N+YGLV L+AFYLPWAMLALD IFGS+ MPDLLGI+AGHL
Sbjct: 122 ISLVFMLLYVWSREFPNAQINLYGLVALKAFYLPWAMLALDVIFGSALMPDLLGIIAGHL 181

Query: 542 HYFLTVLHPLAGGRNVLKTPNWVHKLVRRWGIAYHPTGQA-----VQPDRNAGTAFRGRS 706
           +YFLTVLHPLAGG+N+LKTP WVHKLV RW I   P  +      VQ + ++G  FRGRS
Sbjct: 182 YYFLTVLHPLAGGKNILKTPMWVHKLVARWRIGAPPITRGQPVNNVQQESSSG-VFRGRS 240

Query: 707 YRLSG 721
           YRL+G
Sbjct: 241 YRLNG 245


>ref|XP_003530537.1| PREDICTED: derlin-1-like [Glycine max]
          Length = 246

 Score =  371 bits (952), Expect = e-100
 Identities = 175/245 (71%), Positives = 203/245 (82%), Gaps = 5/245 (2%)
 Frame = +2

Query: 2   SSPSEFYNSLPPISKAYGTVCFLATAAYQLGIYNPFHIALIHELVFSRFQLWRLFTNFFF 181
           SSP+EFY+SLPPI+KAYGTVC LATA Y LG+Y+P +IAL ++ VF  FQ+WRLFTN FF
Sbjct: 2   SSPAEFYHSLPPITKAYGTVCLLATATYHLGLYHPAYIALFYDKVFYGFQVWRLFTNLFF 61

Query: 182 LGPFSVNFAIRLLMIARYGVQVERGPFDRRPADFLWMMFFGAFSMLIFSAIPWFRSPFLG 361
           LGPFS+NF IRLLMI RYGVQ+E+GPFDRR ADFLWMM FGAF++L+ SAIP F SPFL 
Sbjct: 62  LGPFSINFGIRLLMIVRYGVQLEKGPFDRRTADFLWMMIFGAFALLVLSAIPIFWSPFLA 121

Query: 362 VSLVFMLVYVWSREFPNAKVNIYGLVTLRAFYLPWAMLALDAIFGSSPMPDLLGILAGHL 541
           V LVFML+YVWSREFPNA++NIYGLV L+AFYLPWAMLALD IFGS  +PDLLGI+AGHL
Sbjct: 122 VPLVFMLLYVWSREFPNAQINIYGLVALKAFYLPWAMLALDVIFGSPLIPDLLGIIAGHL 181

Query: 542 HYFLTVLHPLAGGRNVLKTPNWVHKLVRRWGIAYHPTGQA-----VQPDRNAGTAFRGRS 706
           +YF TVLHPLAGG+N+LKTP WVHKL+ RW I   P  +       Q +R +G AFRGRS
Sbjct: 182 YYFFTVLHPLAGGKNILKTPMWVHKLIARWRIGVQPISRGPAANNPQQERGSGVAFRGRS 241

Query: 707 YRLSG 721
           YRL G
Sbjct: 242 YRLGG 246


>ref|XP_003525291.1| PREDICTED: derlin-1-like [Glycine max]
          Length = 246

 Score =  370 bits (949), Expect = e-100
 Identities = 179/245 (73%), Positives = 205/245 (83%), Gaps = 5/245 (2%)
 Frame = +2

Query: 2   SSPSEFYNSLPPISKAYGTVCFLATAAYQLGIYNPFHIALIHELVFSRFQLWRLFTNFFF 181
           SSP+EFY+SLPPI+KAYGTVC LATA Y LG+ +P +IAL+++ VF  FQ WRLFTN FF
Sbjct: 2   SSPAEFYHSLPPITKAYGTVCLLATATYHLGLDHPAYIALLYDKVFYGFQAWRLFTNLFF 61

Query: 182 LGPFSVNFAIRLLMIARYGVQVERGPFDRRPADFLWMMFFGAFSMLIFSAIPWFRSPFLG 361
           LGPFS+NF IRLLMI RYGVQ+E+GPFDRR ADFLWMM FGAF++L+ SAIP F SPFL 
Sbjct: 62  LGPFSINFGIRLLMIVRYGVQLEKGPFDRRTADFLWMMIFGAFALLVLSAIPIFWSPFLA 121

Query: 362 VSLVFMLVYVWSREFPNAKVNIYGLVTLRAFYLPWAMLALDAIFGSSPMPDLLGILAGHL 541
           V LVFML+YVWSREFPNA++NIYGLV L+AFYLPWAMLALD IFGS  +PDLLGI+AGHL
Sbjct: 122 VPLVFMLLYVWSREFPNAQINIYGLVALKAFYLPWAMLALDIIFGSPLIPDLLGIIAGHL 181

Query: 542 HYFLTVLHPLAGGRNVLKTPNWVHKLVRRWGIAYHP--TGQAV---QPDRNAGTAFRGRS 706
           +YFLTVLHPLAGG+N+LKTP WVHKLV RW I   P   GQA    Q +R +G AFRGRS
Sbjct: 182 YYFLTVLHPLAGGKNILKTPMWVHKLVARWIIGVQPISRGQAANDPQQERGSGVAFRGRS 241

Query: 707 YRLSG 721
           YRL G
Sbjct: 242 YRLGG 246


>ref|XP_004135679.1| PREDICTED: derlin-1-like [Cucumis sativus]
           gi|449489818|ref|XP_004158425.1| PREDICTED:
           derlin-1-like [Cucumis sativus]
          Length = 242

 Score =  368 bits (945), Expect = 1e-99
 Identities = 175/241 (72%), Positives = 204/241 (84%), Gaps = 1/241 (0%)
 Frame = +2

Query: 2   SSPSEFYNSLPPISKAYGTVCFLATAAYQLGIYNPFHIALIHELVFSRFQLWRLFTNFFF 181
           SSP+EFYNSLPPISKAYGT+CFLAT A+QLG+Y+P  IAL + LVF  FQ+WRLFTNFFF
Sbjct: 2   SSPAEFYNSLPPISKAYGTLCFLATTAFQLGLYDPMLIALDYGLVFKHFQVWRLFTNFFF 61

Query: 182 LGPFSVNFAIRLLMIARYGVQVERGPFDRRPADFLWMMFFGAFSMLIFSAIPWFRSPFLG 361
           LG FS+NF IRLLMIARYGVQ+E GPF RR ADFLWMM FG+ ++L+ +AIP F+ P LG
Sbjct: 62  LGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGSLTLLVLAAIPIFQFPVLG 121

Query: 362 VSLVFMLVYVWSREFPNAKVNIYGLVTLRAFYLPWAMLALDAIFGSSPMPDLLGILAGHL 541
           +SLVFML+YVWSREFPNA++NIYGLVTL+AFYLPWAMLALD IFGS  +PDLLGILAGHL
Sbjct: 122 ISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHL 181

Query: 542 HYFLTVLHPLAGGRNVLKTPNWVHKLVRRWGIAYHPTGQAVQP-DRNAGTAFRGRSYRLS 718
           +YFLTVLHPLAGG+N+L+TP W+ +LV RW I   P  +A  P DR    AFRGRSYRL+
Sbjct: 182 YYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPMQRAAVPDDRGTSGAFRGRSYRLN 241

Query: 719 G 721
           G
Sbjct: 242 G 242


>ref|XP_002275238.1| PREDICTED: derlin-1 [Vitis vinifera] gi|296081591|emb|CBI20596.3|
           unnamed protein product [Vitis vinifera]
          Length = 240

 Score =  364 bits (934), Expect = 2e-98
 Identities = 171/240 (71%), Positives = 203/240 (84%)
 Frame = +2

Query: 2   SSPSEFYNSLPPISKAYGTVCFLATAAYQLGIYNPFHIALIHELVFSRFQLWRLFTNFFF 181
           S+P+EFYNSLPPISKAYGT+C +AT A+ LG++ P + ALI+ELVF  FQ+WRL TNFFF
Sbjct: 2   STPAEFYNSLPPISKAYGTMCLVATTAFHLGLFPPMYTALIYELVFKHFQVWRLVTNFFF 61

Query: 182 LGPFSVNFAIRLLMIARYGVQVERGPFDRRPADFLWMMFFGAFSMLIFSAIPWFRSPFLG 361
           LG FS+NF IRLLMIARYGVQ+E+G F+RR ADFLWMM FGA ++L+ SAIP   +PFLG
Sbjct: 62  LGKFSINFGIRLLMIARYGVQLEKGVFERRTADFLWMMIFGALTLLVLSAIPLLWTPFLG 121

Query: 362 VSLVFMLVYVWSREFPNAKVNIYGLVTLRAFYLPWAMLALDAIFGSSPMPDLLGILAGHL 541
           VSLVFML+YVWSREFPNA++N+YGLV L+AFY PWAMLALD IFGS  +PDLLGI+AGHL
Sbjct: 122 VSLVFMLLYVWSREFPNAQINLYGLVQLKAFYFPWAMLALDVIFGSQILPDLLGIVAGHL 181

Query: 542 HYFLTVLHPLAGGRNVLKTPNWVHKLVRRWGIAYHPTGQAVQPDRNAGTAFRGRSYRLSG 721
           +YFLTVLHPL+ G+N+LKTP WVHKLV R+ I Y PT    QP+R AG AFRGR YRL+G
Sbjct: 182 YYFLTVLHPLSTGKNILKTPRWVHKLVARFRIGY-PTTAPAQPERAAGVAFRGRGYRLNG 240


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