BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005270
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    95   5e-18
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    91   1e-16
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    87   1e-15
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    86   3e-15
ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, p...    85   7e-15

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 10/146 (6%)
 Frame = -2

Query: 412 NGLVCMSSMYNTVMCLWNPSTRKHKILP------STLCGDRP-NRNVHGFGYNATGKDYE 254
           NGL+C+S++ + +  +WNPSTRKH+++P          G +  +  V GFGY++   DY+
Sbjct: 103 NGLLCISNVVDDI-AVWNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYK 161

Query: 253 VVKVRRVSYCGSNRGYE--VTVYSLRRNSWRRIQDFPYGVP-TGNVGAFNSGALHWKAQR 83
           +V++ +    G  R +E  V VYSLR+ SWRRI D PY V   G  G F +GALHW    
Sbjct: 162 LVRIAQFGG-GGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGE 220

Query: 82  SVKNGILSLESVIIAYDVGGESFREV 5
           + ++ +    ++++A D+G E +REV
Sbjct: 221 NPESNV---ANIVVALDLGVEDYREV 243


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 55/151 (36%), Positives = 86/151 (56%), Gaps = 13/151 (8%)
 Frame = -2

Query: 415 CNGLVCMSSMYNTVMCLWNPSTRKHKILPST---------LCGDRPNRNVHGFGYNATGK 263
           CNGL+C+ ++ + +  LWNPS R H+++P           +C  R +  V GFGY+ +  
Sbjct: 95  CNGLLCICNIVDDI-ALWNPSIRAHRVVPYLPVELKRYFGMCSCRVS--VFGFGYDLSND 151

Query: 262 DYEVVKVRRVSYCGSNRGY---EVTVYSLRRNSWRRIQDFPYGV-PTGNVGAFNSGALHW 95
           DY++V++ +  + G +R     EV V+SLR+NSWRRI D PY V   G  G + +GALHW
Sbjct: 152 DYKLVRIAQ--FGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPGENGIYANGALHW 209

Query: 94  KAQRSVKNGILSLESVIIAYDVGGESFREVP 2
              +   +   ++   I+A D+G E +  VP
Sbjct: 210 LVSQDPDS---TVADTIVALDLGVEDYHVVP 237


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 57/142 (40%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
 Frame = -2

Query: 415 CNGLVCMSSMYNTVMCLWNPSTRKHKILPSTLCGDRPNR-NVHGFGYNATGKDYEVVKVR 239
           CNGL+C +   + V+ LWNPS R  K  P      RP      G GY+   +DY+VV V 
Sbjct: 151 CNGLLCFAIKGDCVL-LWNPSIRVSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYKVVAV- 208

Query: 238 RVSYCGSNRGY---EVTVYSLRRNSWRRIQDFPYGV-PTGNVGAFNSGALHWKAQRSVKN 71
              +C  +  +   +V VYS+  NSWR+IQDFP+G  P  N G F SG L+W A  S+ +
Sbjct: 209 ---FCDPSEYFIECKVKVYSMATNSWRKIQDFPHGFSPFQNSGKFVSGTLNWAANHSIGS 265

Query: 70  GILSLESVIIAYDVGGESFREV 5
             L    VI++ D+  E++REV
Sbjct: 266 SSL---WVIVSLDLHKETYREV 284


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 57/142 (40%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
 Frame = -2

Query: 415 CNGLVCMSSMYNTVMCLWNPSTRKHKILPSTLCGDRPNR-NVHGFGYNATGKDYEVVKVR 239
           CNGL+C +   + V+ LWNPS R  K  P      RP      G GY+   +DY+VV V 
Sbjct: 152 CNGLLCFAIKGDCVL-LWNPSIRVSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYKVVAV- 209

Query: 238 RVSYCGSNRGY---EVTVYSLRRNSWRRIQDFPYG-VPTGNVGAFNSGALHWKAQRSVKN 71
              +C  +  +   +V VYS+  NSWR+IQDFP+G +P  N G F SG L+W A  S+  
Sbjct: 210 ---FCDPSEYFIECKVKVYSMATNSWRKIQDFPHGFLPFQNSGKFVSGTLNWAANHSIGP 266

Query: 70  GILSLESVIIAYDVGGESFREV 5
              S   VI++ D+  E++REV
Sbjct: 267 ---SSFWVIVSLDLHKETYREV 285


>ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, putative [Ricinus
            communis] gi|223529397|gb|EEF31360.1| Transitional
            endoplasmic reticulum ATPase, putative [Ricinus communis]
          Length = 1029

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 59/149 (39%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
 Frame = -2

Query: 415  CNGLVCMSSMYNTVMCLWNPSTRKHKILPSTLCGDRPNRNVH-GFGYNATGKDYEVVKVR 239
            CNGL+C++   +T   L NP T++ + LP    G  P+   + GFGY+A+  DY+V+K  
Sbjct: 723  CNGLICIALDLSTFFVL-NPGTKECRALPDP--GSYPDGVAYYGFGYDASADDYKVLK-G 778

Query: 238  RVSYCGSNRGYE-----VTVYSLRRNSWRRIQD-----FPYGVPTGNVGAFNSGALHWKA 89
                     GYE     V V+SLR NSWR IQD      PY +P    G F  GALHW  
Sbjct: 779  HTRVVVKEAGYEHHESIVKVFSLRTNSWRTIQDSSPSYLPYPLP----GIFVHGALHW-- 832

Query: 88   QRSVKNGILSLESVIIAYDVGGESFREVP 2
              S ++GI    S+I ++D+  E F+EVP
Sbjct: 833  --SARHGIEPDYSLIASFDLAAEKFKEVP 859