BLASTX nr result
ID: Coptis25_contig00005267
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00005267
(3367 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24290.3| unnamed protein product [Vitis vinifera] 1116 0.0
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li... 1111 0.0
ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-li... 1041 0.0
ref|XP_003527511.1| PREDICTED: replication factor C subunit 1-li... 1034 0.0
ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-li... 1033 0.0
>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
Length = 941
Score = 1116 bits (2886), Expect = 0.0
Identities = 585/786 (74%), Positives = 648/786 (82%), Gaps = 4/786 (0%)
Frame = +2
Query: 632 FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVMTGTLDSLEREEAEVLIKRHGGRVTGSV 811
FMNFGERKDPPHKGEKEVPEGA DCLAGLTFV++GTLDSLEREEAE LIKRHGGRVTGSV
Sbjct: 158 FMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 217
Query: 812 SKKTNYLLVDEDIGGRKSEKAKELGTTFLNEDGLFDIIRKSKPTKTIPPADTKTKTVEKA 991
SKKTN+LL DEDIGG KS KAKELGT FL EDGLFD+I S K P K+++K
Sbjct: 218 SKKTNFLLCDEDIGGNKSAKAKELGTAFLTEDGLFDMICASNHAKA-PARGEPKKSLDKV 276
Query: 992 AASQPKGSPLKLEAKEAKKVDPKGMASGASYAKPKG--EALGRGGSLTWTEKYKPKVPND 1165
+ PK SP K+E K + V+ G + + PK + +G SLTWTEKYKPKVPND
Sbjct: 277 VLATPKKSPQKVEKKVDQVVNSSGKRTVLAATTPKHIYQTIGHA-SLTWTEKYKPKVPND 335
Query: 1166 IIGNQSLVKQLHDWLMQWNEIFLNAGPKGKGKKQNDSATKKAVLLSGTPGIGKSTSAKLI 1345
IIGNQSLVKQLH+WL WNE FL+ G KGKGKKQNDS KKAVLLSGTPGIGK+TSAKL+
Sbjct: 336 IIGNQSLVKQLHEWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKLV 395
Query: 1346 SQMLGFQAIEVNASDSRGKADSKIIKGIGGSTANSVKELVSNESLNVNMDRSKHPKSVLI 1525
SQMLGFQAIEVNASD+RGKA++KI KGIGGS ANS+KELVSNE+L +MDRSKHPK+VLI
Sbjct: 396 SQMLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELVSNEALGAHMDRSKHPKTVLI 455
Query: 1526 MDEVDGMSAGDRGGVVDLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSYRKPTKQQ 1705
MDEVDGMSAGDRGGV DL NDRYSQKLKSLVNYCLLLS+RKPTKQQ
Sbjct: 456 MDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQ 515
Query: 1706 MAKRLMQVANAEGLQVNEIALEELAERVNGDMRMAINQLHYMSLSSSVIKYDDMRQRLLS 1885
MAKRL+QVANAEGLQVNEIALEELAERVNGDMRMA+NQL YMSLS SVIKYDD+RQRLLS
Sbjct: 516 MAKRLLQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDVRQRLLS 575
Query: 1886 SSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDMDLVPLLIQENYLNYRPSSAGKDD 2065
S+KDEDISPF AVDKLFG+NGGKLRMDERIDLSMSD DLVPLLIQENY+NYRP+ AGKDD
Sbjct: 576 SAKDEDISPFVAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPTLAGKDD 635
Query: 2066 SGVKRMNLIARAAESIGSGDIFNVQIRRYRQWQLSPAGSLCSCIIPAALLHGQRETLEQG 2245
+GVKRM+L+ARAAESIG GDI NVQIRRYRQWQLS AGS SCI PAALLHGQRETLEQG
Sbjct: 636 NGVKRMSLLARAAESIGDGDIINVQIRRYRQWQLSQAGSFASCITPAALLHGQRETLEQG 695
Query: 2246 ERNFNRFGGWLGKNSTMGKNFRLLEDVHVHLLASREIISNRQTVRVDYLSLILKQLIDPL 2425
ERNFNRFGGWLGKNSTMGKN RLLED+HVHLLASRE S R T+R+DYL+LILK+L DPL
Sbjct: 696 ERNFNRFGGWLGKNSTMGKNKRLLEDLHVHLLASRESNSGRGTLRIDYLTLILKRLTDPL 755
Query: 2426 RVLPKDEAVQKVVEFMDAYSISQEDFDTIVELSKFQGHRNPLDGIQPAVKAALTKAYKQG 2605
R+LPKD+AVQKVVEFMD YSISQEDFDTIVELSKFQGH +PL+GIQPAVK+ALTKAY +G
Sbjct: 756 RMLPKDDAVQKVVEFMDLYSISQEDFDTIVELSKFQGHPSPLEGIQPAVKSALTKAYNKG 815
Query: 2606 SNLRVVRAADMITVPGIKKAPKKRIAAMLEPVDEALAEENGDILAENXXXXXXXXXXXGI 2785
S+ R+VRAAD+IT+PGIKKAPKKRIAA+LEPVD+ LA ENGD LAE+
Sbjct: 816 SSSRLVRAADLITLPGIKKAPKKRIAAILEPVDDELARENGDALAESEEENSSDTDDMDT 875
Query: 2786 DNVERKPQLDLQSSSSKGIQVQLDLKNNGXXXXXXXXXXXXXXXXE-SVEKKGGRGSGTA 2962
N ++K +DLQ+ +SKGI+V+LDLK G S EKKGGRGSG A
Sbjct: 876 ANGDKKLPVDLQNLNSKGIKVELDLKGAGSSSAKKTPAGRGRGGGSASTEKKGGRGSGAA 935
Query: 2963 -SKRKR 2977
+KRKR
Sbjct: 936 GAKRKR 941
Score = 70.9 bits (172), Expect = 2e-09
Identities = 43/104 (41%), Positives = 55/104 (52%), Gaps = 19/104 (18%)
Frame = +1
Query: 31 SDIRKWFMKQHDKNNNATKTDPPPEKNVS-------------------QDSSSRRKTSKY 153
SDIRKWFMK+HD +N PE S Q+SS RRKTSKY
Sbjct: 6 SDIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKY 65
Query: 154 FANDGKKVKDEMEAEKTPVKRKTQKSSEQVHDDVKPPLAKKLHK 285
F +K KDE E E+ P KRKTQK ++ + + PP +KK+ +
Sbjct: 66 F----QKPKDEKEMEELPAKRKTQKGTK---ESLNPPPSKKIRR 102
>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
Length = 933
Score = 1111 bits (2873), Expect = 0.0
Identities = 584/784 (74%), Positives = 645/784 (82%), Gaps = 2/784 (0%)
Frame = +2
Query: 632 FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVMTGTLDSLEREEAEVLIKRHGGRVTGSV 811
FMNFGERKDPPHKGEKEVPEGA DCLAGLTFV++GTLDSLEREEAE LIKRHGGRVTGSV
Sbjct: 158 FMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 217
Query: 812 SKKTNYLLVDEDIGGRKSEKAKELGTTFLNEDGLFDIIRKSKPTKTIPPADTKTKTVEKA 991
SKKTN+LL DEDIGG KS KAKELGT FL EDGLFD+I S K P K+++K
Sbjct: 218 SKKTNFLLCDEDIGGNKSAKAKELGTAFLTEDGLFDMICASNHAKA-PARGEPKKSLDKV 276
Query: 992 AASQPKGSPLKLEAKEAKKVDPKGMASGASYAKPKGEALGRGGSLTWTEKYKPKVPNDII 1171
+ PK SP K+E K + V A+ K + +G SLTWTEKYKPKVPNDII
Sbjct: 277 VLATPKKSPQKVEKKGKRTV------LAATTPKHIYQTIGHA-SLTWTEKYKPKVPNDII 329
Query: 1172 GNQSLVKQLHDWLMQWNEIFLNAGPKGKGKKQNDSATKKAVLLSGTPGIGKSTSAKLISQ 1351
GNQSLVKQLH+WL WNE FL+ G KGKGKKQNDS KKAVLLSGTPGIGK+TSAKL+SQ
Sbjct: 330 GNQSLVKQLHEWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKLVSQ 389
Query: 1352 MLGFQAIEVNASDSRGKADSKIIKGIGGSTANSVKELVSNESLNVNMDRSKHPKSVLIMD 1531
MLGFQAIEVNASD+RGKA++KI KGIGGS ANS+KELVSNE+L +MDRSKHPK+VLIMD
Sbjct: 390 MLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELVSNEALGAHMDRSKHPKTVLIMD 449
Query: 1532 EVDGMSAGDRGGVVDLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSYRKPTKQQMA 1711
EVDGMSAGDRGGV DL NDRYSQKLKSLVNYCLLLS+RKPTKQQMA
Sbjct: 450 EVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMA 509
Query: 1712 KRLMQVANAEGLQVNEIALEELAERVNGDMRMAINQLHYMSLSSSVIKYDDMRQRLLSSS 1891
KRL+QVANAEGLQVNEIALEELAERVNGDMRMA+NQL YMSLS SVIKYDD+RQRLLSS+
Sbjct: 510 KRLLQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDVRQRLLSSA 569
Query: 1892 KDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDMDLVPLLIQENYLNYRPSSAGKDDSG 2071
KDEDISPF AVDKLFG+NGGKLRMDERIDLSMSD DLVPLLIQENY+NYRP+ AGKDD+G
Sbjct: 570 KDEDISPFVAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPTLAGKDDNG 629
Query: 2072 VKRMNLIARAAESIGSGDIFNVQIRRYRQWQLSPAGSLCSCIIPAALLHGQRETLEQGER 2251
VKRM+L+ARAAESIG GDI NVQIRRYRQWQLS AGS SCI PAALLHGQRETLEQGER
Sbjct: 630 VKRMSLLARAAESIGDGDIINVQIRRYRQWQLSQAGSFASCITPAALLHGQRETLEQGER 689
Query: 2252 NFNRFGGWLGKNSTMGKNFRLLEDVHVHLLASREIISNRQTVRVDYLSLILKQLIDPLRV 2431
NFNRFGGWLGKNSTMGKN RLLED+HVHLLASRE S R T+R+DYL+LILK+L DPLR+
Sbjct: 690 NFNRFGGWLGKNSTMGKNKRLLEDLHVHLLASRESNSGRGTLRIDYLTLILKRLTDPLRM 749
Query: 2432 LPKDEAVQKVVEFMDAYSISQEDFDTIVELSKFQGHRNPLDGIQPAVKAALTKAYKQGSN 2611
LPKD+AVQKVVEFMD YSISQEDFDTIVELSKFQGH +PL+GIQPAVK+ALTKAY +GS+
Sbjct: 750 LPKDDAVQKVVEFMDLYSISQEDFDTIVELSKFQGHPSPLEGIQPAVKSALTKAYNKGSS 809
Query: 2612 LRVVRAADMITVPGIKKAPKKRIAAMLEPVDEALAEENGDILAENXXXXXXXXXXXGIDN 2791
R+VRAAD+IT+PGIKKAPKKRIAA+LEPVD+ LA ENGD LAE+ N
Sbjct: 810 SRLVRAADLITLPGIKKAPKKRIAAILEPVDDELARENGDALAESEEENSSDTDDMDTAN 869
Query: 2792 VERKPQLDLQSSSSKGIQVQLDLKNNGXXXXXXXXXXXXXXXXE-SVEKKGGRGSGTA-S 2965
++K +DLQ+ +SKGI+V+LDLK G S EKKGGRGSG A +
Sbjct: 870 GDKKLPVDLQNLNSKGIKVELDLKGAGSSSAKKTPAGRGRGGGSASTEKKGGRGSGAAGA 929
Query: 2966 KRKR 2977
KRKR
Sbjct: 930 KRKR 933
Score = 70.9 bits (172), Expect = 2e-09
Identities = 43/104 (41%), Positives = 55/104 (52%), Gaps = 19/104 (18%)
Frame = +1
Query: 31 SDIRKWFMKQHDKNNNATKTDPPPEKNVS-------------------QDSSSRRKTSKY 153
SDIRKWFMK+HD +N PE S Q+SS RRKTSKY
Sbjct: 6 SDIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKY 65
Query: 154 FANDGKKVKDEMEAEKTPVKRKTQKSSEQVHDDVKPPLAKKLHK 285
F +K KDE E E+ P KRKTQK ++ + + PP +KK+ +
Sbjct: 66 F----QKPKDEKEMEELPAKRKTQKGTK---ESLNPPPSKKIRR 102
>ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 981
Score = 1041 bits (2693), Expect = 0.0
Identities = 548/796 (68%), Positives = 624/796 (78%), Gaps = 14/796 (1%)
Frame = +2
Query: 632 FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVMTGTLDSLEREEAEVLIKRHGGRVTGSV 811
FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFV++GTLDSLEREEAE LIKRHGGRVTGSV
Sbjct: 194 FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 253
Query: 812 SKKTNYLLVDEDIGGRKSEKAKELGTTFLNEDGLFDIIRKSKPTKTIPPADTKTKTVEKA 991
SKKTNYLL DEDIGGRKS KAKELGT FL EDGLFD+IR S K PP K+V K+
Sbjct: 254 SKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG--KKAPPRQDPKKSVVKS 311
Query: 992 AASQPKGSPLKLEAKEAKKVDPKGMASGASYAKPKGEALGRGGSLTWTEKYKPKVPNDII 1171
S K + K++AK K +A+GAS AK K +LTWTEKY+PKVPNDII
Sbjct: 312 EESPTKKNFQKVQAKSHKD-----LAAGASPAKQKS-GTAEFSNLTWTEKYRPKVPNDII 365
Query: 1172 GNQSLVKQLHDWLMQWNEIFLNAGPKGKGKKQNDSATKKAVLLSGTPGIGKSTSAKLISQ 1351
GNQSLVKQLHDWL WNE FL+ G K K KK +DS KKAVLL G PGIGK+TSAKL+SQ
Sbjct: 366 GNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQ 425
Query: 1352 MLGFQAIEVNASDSRGKADSKIIKGIGGSTANSVKELVSNESLNVNMDRSKHPKSVLIMD 1531
MLGF+AIEVNASD+RGK+D+KI KGIGGS ANS+KEL+SNESL+ M++ KH K+VLIMD
Sbjct: 426 MLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMNQPKHHKTVLIMD 485
Query: 1532 EVDGMSAGDRGGVVDLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSYRKPTKQQMA 1711
EVDGMSAGDRGGV DL NDRYSQKLKSLVNYCL+LS+RKPTKQQMA
Sbjct: 486 EVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMA 545
Query: 1712 KRLMQVANAEGLQVNEIALEELAERVNGDMRMAINQLHYMSLSSSVIKYDDMRQRLLSSS 1891
KRL+QVANAEGLQVNEIALEELAERVNGDMRMA+NQL Y+SLS SVIKYDD+RQRLLSS
Sbjct: 546 KRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSK 605
Query: 1892 KDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDMDLVPLLIQENYLNYRPSSAGKDDSG 2071
KDEDISPFTAVDKLFG+N GKLRMDERIDLSMSD+DLVPLLIQENY+NYRPS+ KDD+G
Sbjct: 606 KDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSAVSKDDTG 665
Query: 2072 VKRMNLIARAAESIGSGDIFNVQIRRYRQWQLSPAGSLCSCIIPAALLHGQRETLEQGER 2251
+KRM+LIARAAESI GDI NVQIRR+RQWQLS + + SCIIPA+LLHGQRETLEQ ER
Sbjct: 666 IKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCVASCIIPASLLHGQRETLEQYER 725
Query: 2252 NFNRFGGWLGKNSTMGKNFRLLEDVHVHLLASREIISNRQTVRVDYLSLILKQLIDPLRV 2431
NFNRFG WLGKNST GKN RLLED+HVH+LASRE S R+ +RV+ L+L LK+L +PL
Sbjct: 726 NFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHT 785
Query: 2432 LPKDEAVQKVVEFMDAYSISQEDFDTIVELSKFQGHRNPLDGIQPAVKAALTKAYKQGSN 2611
LPKDEAV+ VVEFM YSISQEDFDT++ELSKFQG +NPLDG+ PAVKAALTKAYK+ S
Sbjct: 786 LPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASK 845
Query: 2612 LRVVRAADMITVPGIKKAPKKRIAAMLEPVDEALAEENGDILAENXXXXXXXXXXXGIDN 2791
+VRAAD+I +PG+KKAPKKRIAA+LEP ++ + G+ L E+ G+
Sbjct: 846 THMVRAADLIALPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEGVSL 905
Query: 2792 VE-------------RKPQLDLQSSSSKGIQVQLDLKN-NGXXXXXXXXXXXXXXXXESV 2929
+K QL+LQS + KG+QVQLDLK ++
Sbjct: 906 THSFLFAIIENSTNGQKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGKGGRTSQAS 965
Query: 2930 EKKGGRGSGTASKRKR 2977
EKKGGRGSG+A+KRKR
Sbjct: 966 EKKGGRGSGSATKRKR 981
Score = 60.1 bits (144), Expect = 4e-06
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 13/84 (15%)
Frame = +1
Query: 28 MSDIRKWFMKQHDKNN--NATKTDPPP---EKNVSQ--------DSSSRRKTSKYFANDG 168
M DIRKWFMK HDK+N + K P P EK+ S +S+ R+ TSKYFA++
Sbjct: 1 MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSASAGKTGPSGGESAGRQITSKYFASEK 60
Query: 169 KKVKDEMEAEKTPVKRKTQKSSEQ 240
++ KD E E P+ RK+ + +++
Sbjct: 61 QEAKDAEETEVLPIIRKSPRDTKE 84
>ref|XP_003527511.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
Length = 947
Score = 1034 bits (2673), Expect = 0.0
Identities = 548/788 (69%), Positives = 612/788 (77%), Gaps = 3/788 (0%)
Frame = +2
Query: 632 FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVMTGTLDSLEREEAEVLIKRHGGRVTGSV 811
FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFV++GTLDSLEREEAE LIKRHGGRVTGSV
Sbjct: 170 FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 229
Query: 812 SKKTNYLLVDEDIGGRKSEKAKELGTTFLNEDGLFDIIRKSKPTKTIPPADTKTKTVEKA 991
SKKTNYLL DEDIGGRKSEKAKELGT+FL EDGLFD+IR SKP K D K A
Sbjct: 230 SKKTNYLLCDEDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKASSQEDKKLVNKAVA 289
Query: 992 AASQPKGSPLKLEAKEAKKVDPKGMASGASYAKPKGEALGRGGSLTWTEKYKPKVPNDII 1171
ASQ K SP K K P S + AKPK + S+ WTEKY+PK P DII
Sbjct: 290 VASQSKVSP-----KSQVKGKPLSSRSPSKQAKPKTATTVQSSSM-WTEKYRPKDPKDII 343
Query: 1172 GNQSLVKQLHDWLMQWNEIFLNAGPKGKGKKQNDSATKKAVLLSGTPGIGKSTSAKLISQ 1351
GNQSLV QL +WL WNE FL+ G K +GKKQNDS KKAVLLSGTPGIGK+TSAKL+ Q
Sbjct: 344 GNQSLVLQLRNWLKAWNEHFLDTGNKKQGKKQNDSGLKKAVLLSGTPGIGKTTSAKLVCQ 403
Query: 1352 MLGFQAIEVNASDSRGKADSKIIKGIGGSTANSVKELVSNESLNVNMDRSKHPKSVLIMD 1531
LGFQAIEVNASDSRGKADSKI KGI GS NSVKELV+NE++ VNM+RSKH KSVLIMD
Sbjct: 404 ELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIGVNMERSKHYKSVLIMD 463
Query: 1532 EVDGMSAGDRGGVVDLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSYRKPTKQQMA 1711
EVDGMSAGDRGGV DL NDRYSQKLKSLVNYCLLLS+RKPTKQQMA
Sbjct: 464 EVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMA 523
Query: 1712 KRLMQVANAEGLQVNEIALEELAERVNGDMRMAINQLHYMSLSSSVIKYDDMRQRLLSSS 1891
KRLM V+ AE LQVNEIALEELAERVNGDMRMA+NQL YMSLS SVI YDD+RQR L+++
Sbjct: 524 KRLMDVSKAERLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVINYDDIRQRFLTNA 583
Query: 1892 KDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDMDLVPLLIQENYLNYRPSSAGKDDSG 2071
KDEDISPFTAVDKLFG+N GKL+MDERI+LSMSD DLVPL+IQENY+NYRPS AGKDDSG
Sbjct: 584 KDEDISPFTAVDKLFGFNAGKLKMDERINLSMSDPDLVPLIIQENYINYRPSLAGKDDSG 643
Query: 2072 VKRMNLIARAAESIGSGDIFNVQIRRYRQWQLSPAGSLCSCIIPAALLHGQRETLEQGER 2251
+KRMNLIARAAESI GDI NVQIRRYRQWQLS SL + IIPA+LLHGQRE LEQGER
Sbjct: 644 IKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSLATSIIPASLLHGQREILEQGER 703
Query: 2252 NFNRFGGWLGKNSTMGKNFRLLEDVHVHLLASREIISNRQTVRVDYLSLILKQLIDPLRV 2431
NFNRFGGWLGKNSTMGKN RLL+D+HVH+LASRE S R T+R++YL+L+LK++ +PLR
Sbjct: 704 NFNRFGGWLGKNSTMGKNLRLLDDLHVHILASRESSSGRDTIRMEYLTLLLKEMTEPLRT 763
Query: 2432 LPKDEAVQKVVEFMDAYSISQEDFDTIVELSKFQGHRNPLDGIQPAVKAALTKAYKQGSN 2611
LPK EAVQ+VVE M+ YSISQEDFDTIVELSKF+GH NPLDGIQPAVK+ALTKAYK+ S+
Sbjct: 764 LPKAEAVQQVVELMNTYSISQEDFDTIVELSKFKGHPNPLDGIQPAVKSALTKAYKEQSS 823
Query: 2612 LRVVRAADMITVPGIKKAPKKRIAAMLEPVDEALAEENGDILAENXXXXXXXXXXXG--- 2782
RVVR AD+IT+PG+KK PKKRIAA+LEP E + + GD L E+ G
Sbjct: 824 SRVVRVADLITLPGVKKVPKKRIAAILEPAGEEVEKGEGDTLDESEEENSSDNEELGKLC 883
Query: 2783 IDNVERKPQLDLQSSSSKGIQVQLDLKNNGXXXXXXXXXXXXXXXXESVEKKGGRGSGTA 2962
K Q +LQS +SK Q+QL+LK G S + GGRG G +
Sbjct: 884 EGTKGEKLQSELQSYNSKATQIQLELKGTG--------------NSSSKKTSGGRGKGAS 929
Query: 2963 SKRKR*VQ 2986
+ K+ Q
Sbjct: 930 ASGKKVAQ 937
Score = 85.1 bits (209), Expect = 1e-13
Identities = 48/100 (48%), Positives = 59/100 (59%), Gaps = 16/100 (16%)
Frame = +1
Query: 28 MSDIRKWFMKQHDKNNNATKTDPPPEKNVS-----------QDSSSRRKTSKYFANDGKK 174
MSDIRKWFMK HDK NNA + P +K S Q+SS RR TSKYF ++ +K
Sbjct: 1 MSDIRKWFMKTHDKGNNAASSKPSSDKPQSEKTVAFAVAGGQESSGRRITSKYFNSNKQK 60
Query: 175 VKDEMEAEKTPVKRKTQKSSEQVHDD-----VKPPLAKKL 279
KDE E ++ P KRK K SE++H+D V P KKL
Sbjct: 61 GKDEKEKQELPAKRKNAKDSEEIHEDDGDDSVLPTNKKKL 100
>ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 942
Score = 1033 bits (2672), Expect = 0.0
Identities = 541/783 (69%), Positives = 615/783 (78%), Gaps = 1/783 (0%)
Frame = +2
Query: 632 FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVMTGTLDSLEREEAEVLIKRHGGRVTGSV 811
FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFV++GTLDSLEREEAE LIKRHGGRVTGSV
Sbjct: 181 FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 240
Query: 812 SKKTNYLLVDEDIGGRKSEKAKELGTTFLNEDGLFDIIRKSKPTKTIPPADTKTKTVEKA 991
SKKTNYLL DEDIGGRKS KAKELGT FL EDGLFD+IR S K PP K+V K+
Sbjct: 241 SKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG--KKAPPRQDPKKSVVKS 298
Query: 992 AASQPKGSPLKLEAKEAKKVDPKGMASGASYAKPKGEALGRGGSLTWTEKYKPKVPNDII 1171
S K K +KV K + A ++ +LTWTEKY+PKVPNDII
Sbjct: 299 EESPTK--------KNFQKVQAKSKSGTAEFS-----------NLTWTEKYRPKVPNDII 339
Query: 1172 GNQSLVKQLHDWLMQWNEIFLNAGPKGKGKKQNDSATKKAVLLSGTPGIGKSTSAKLISQ 1351
GNQSLVKQLHDWL WNE FL+ G K K KK +DS KKAVLL G PGIGK+TSAKL+SQ
Sbjct: 340 GNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQ 399
Query: 1352 MLGFQAIEVNASDSRGKADSKIIKGIGGSTANSVKELVSNESLNVNMDRSKHPKSVLIMD 1531
MLGF+AIEVNASD+RGK+D+KI KGIGGS ANS+KEL+SNESL+ M++ KH K+VLIMD
Sbjct: 400 MLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMNQPKHHKTVLIMD 459
Query: 1532 EVDGMSAGDRGGVVDLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSYRKPTKQQMA 1711
EVDGMSAGDRGGV DL NDRYSQKLKSLVNYCL+LS+RKPTKQQMA
Sbjct: 460 EVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMA 519
Query: 1712 KRLMQVANAEGLQVNEIALEELAERVNGDMRMAINQLHYMSLSSSVIKYDDMRQRLLSSS 1891
KRL+QVANAEGLQVNEIALEELAERVNGDMRMA+NQL Y+SLS SVIKYDD+RQRLLSS
Sbjct: 520 KRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSK 579
Query: 1892 KDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDMDLVPLLIQENYLNYRPSSAGKDDSG 2071
KDEDISPFTAVDKLFG+N GKLRMDERIDLSMSD+DLVPLLIQENY+NYRPS+ KDD+G
Sbjct: 580 KDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSAVSKDDTG 639
Query: 2072 VKRMNLIARAAESIGSGDIFNVQIRRYRQWQLSPAGSLCSCIIPAALLHGQRETLEQGER 2251
+KRM+LIARAAESI GDI NVQIRR+RQWQLS + + SCIIPA+LLHGQRETLEQ ER
Sbjct: 640 IKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCVASCIIPASLLHGQRETLEQYER 699
Query: 2252 NFNRFGGWLGKNSTMGKNFRLLEDVHVHLLASREIISNRQTVRVDYLSLILKQLIDPLRV 2431
NFNRFG WLGKNST GKN RLLED+HVH+LASRE S R+ +RV+ L+L LK+L +PL
Sbjct: 700 NFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHT 759
Query: 2432 LPKDEAVQKVVEFMDAYSISQEDFDTIVELSKFQGHRNPLDGIQPAVKAALTKAYKQGSN 2611
LPKDEAV+ VVEFM YSISQEDFDT++ELSKFQG +NPLDG+ PAVKAALTKAYK+ S
Sbjct: 760 LPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASK 819
Query: 2612 LRVVRAADMITVPGIKKAPKKRIAAMLEPVDEALAEENGDILAENXXXXXXXXXXXGIDN 2791
+VRAAD+I +PG+KKAPKKRIAA+LEP ++ + G+ L E+
Sbjct: 820 THMVRAADLIALPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENST 879
Query: 2792 VERKPQLDLQSSSSKGIQVQLDLKN-NGXXXXXXXXXXXXXXXXESVEKKGGRGSGTASK 2968
+K QL+LQS + KG+QVQLDLK ++ EKKGGRGSG+A+K
Sbjct: 880 NGQKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGKGGRTSQASEKKGGRGSGSATK 939
Query: 2969 RKR 2977
RKR
Sbjct: 940 RKR 942
Score = 67.0 bits (162), Expect = 3e-08
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 13/84 (15%)
Frame = +1
Query: 28 MSDIRKWFMKQHDKNNNA--TKTDPPP---EKNVSQ--------DSSSRRKTSKYFANDG 168
M DIRKWFMK HDK+N + K P P EK+ S +S+ R+ TSKYFA++
Sbjct: 1 MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSASAGKTGPSGGESAGRQITSKYFASEK 60
Query: 169 KKVKDEMEAEKTPVKRKTQKSSEQ 240
++ KD E E++P KRK QK +E+
Sbjct: 61 QEAKDAEETEESPAKRKFQKYNEE 84