BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005263
         (1682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g1...   409   e-111
ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   408   e-111
ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   407   e-111
emb|CBI38762.3| unnamed protein product [Vitis vinifera]              405   e-110
ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   404   e-110

>ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
          Length = 387

 Score =  409 bits (1050), Expect = e-111
 Identities = 213/391 (54%), Positives = 240/391 (61%), Gaps = 3/391 (0%)
 Frame = +3

Query: 198  SSTNDIVDSTPXXXXXXXXXXXSPAGNQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMR 377
            SS+ DIVDSTP           + AG+ D                            +MR
Sbjct: 6    SSSEDIVDSTPLLA--------NSAGSSDDLTSGRRFARRQRLRQAAQFLRQASGRRMMR 57

Query: 378  EPSMLVXXXXXXXXXXXXSDWAYSKPVVFLDIIWNXXXXXXXXXXXXXXRNENPIMPLRL 557
            EPSMLV            SDWAYSKPVV LDI+WN               +E P MPLRL
Sbjct: 58   EPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVVVAGTVLVLSASEAPGMPLRL 117

Query: 558  WILGYALQCVLHMVFVCMEYRRRH---PPNGPLVQQNLGNDIETGSSTSSIEGDGRDGAD 728
            WI+GYA+QCVLHMVFVC+EYRRR    P     VQ  +G+      S SS EG     A 
Sbjct: 118  WIVGYAMQCVLHMVFVCVEYRRRRRQQPAAASSVQDRVGSS-SGNLSVSSREGSASASAS 176

Query: 729  FLGERHEGEDNTSESVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCIXX 908
                     D+ S SVAKHLESANTMFSF+WWIIGFYWVSAGG  L +DSPQLYWLCI  
Sbjct: 177  AQNVLLGQLDDESTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSPQLYWLCIIF 236

Query: 909  XXXXXXXXXXXXXXXXXIGIAVCCCLPCIIAILYAVAEQEGATTEDINQLPKYKFRKIGD 1088
                             IGIAVCCCLPCIIA+LYAV +QEGA+ EDI QL K+KFR+I  
Sbjct: 237  LGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVTDQEGASKEDIEQLSKFKFRRIES 296

Query: 1089 FEKVNGEAQGPFGGIMTECDTDTPIEHVLQMENAECCICLSAYDDGAELRELPCRHHFHC 1268
             EK+ G  QGP GGIMTEC  D+PIEH L  E+AECCICLS+YDDG ELRELPC HHFHC
Sbjct: 297  NEKLTGTIQGPVGGIMTECQADSPIEHALAEEDAECCICLSSYDDGVELRELPCGHHFHC 356

Query: 1269 ACIDKWLYINATCPLCKYNIIKSGNGSREEI 1361
             C+DKWLYINATCPLCKYNI+KS N S+EE+
Sbjct: 357  VCVDKWLYINATCPLCKYNILKSSNLSQEEV 387


>ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
            [Vitis vinifera]
          Length = 383

 Score =  408 bits (1048), Expect = e-111
 Identities = 203/333 (60%), Positives = 229/333 (68%), Gaps = 2/333 (0%)
 Frame = +3

Query: 369  IMREPSMLVXXXXXXXXXXXXSDWAYSKPVVFLDIIWNXXXXXXXXXXXXXXRNENPIMP 548
            +MREPSMLV            SDWAYSKPVV LD+IWN              R E+P MP
Sbjct: 58   MMREPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMP 117

Query: 549  LRLWILGYALQCVLHMVFVCMEYRRRHPPNGPLVQQNLGNDIETGSSTSSIEGDGRDGAD 728
            LR WI+GYALQC+LH+V V +EYRRR    G    ++ G     GS +SS +GD      
Sbjct: 118  LRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIG-SGGSYSSSPQGDSSQYVT 176

Query: 729  F--LGERHEGEDNTSESVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCI 902
               LG      D +S SVAKHLESANTMFSFIWWIIGFYWVSAGG  L RDSPQLYWLCI
Sbjct: 177  LASLG------DESSTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCI 230

Query: 903  XXXXXXXXXXXXXXXXXXXIGIAVCCCLPCIIAILYAVAEQEGATTEDINQLPKYKFRKI 1082
                               IGIAVCCCLPCIIAILYAVA+QEGA+ EDI+QL ++KFRK+
Sbjct: 231  IFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKV 290

Query: 1083 GDFEKVNGEAQGPFGGIMTECDTDTPIEHVLQMENAECCICLSAYDDGAELRELPCRHHF 1262
            GD EK++G+ QG  GGIMTEC TD P EHVL  E+AECCICLSAYDDG ELRELPC HHF
Sbjct: 291  GDIEKIDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHF 350

Query: 1263 HCACIDKWLYINATCPLCKYNIIKSGNGSREEI 1361
            HC C+DKWLYINATCPLCKYNI+KS +  REE+
Sbjct: 351  HCTCVDKWLYINATCPLCKYNILKSSSNGREEV 383


>ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
            [Vitis vinifera]
          Length = 382

 Score =  407 bits (1046), Expect = e-111
 Identities = 204/329 (62%), Positives = 228/329 (69%), Gaps = 2/329 (0%)
 Frame = +3

Query: 369  IMREPSMLVXXXXXXXXXXXXSDWAYSKPVVFLDIIWNXXXXXXXXXXXXXXRNENPIMP 548
            IMREPSM V            SDWAYSKP+V LDI+WN              R+E P  P
Sbjct: 53   IMREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTP 112

Query: 549  LRLWILGYALQCVLHMVFVCMEYRRRHP--PNGPLVQQNLGNDIETGSSTSSIEGDGRDG 722
            LRLWI+GY LQCVLHMV VC+EY+RR     +G L +          SS+ S EGD  D 
Sbjct: 113  LRLWIIGYGLQCVLHMVCVCVEYKRRRRLVSSGALERSGGWGSGHLSSSSGSDEGDPIDY 172

Query: 723  ADFLGERHEGEDNTSESVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCI 902
               +  R+  ED TS  VAKHLESANTMFSFIWWIIGFYWVSAGG DLTRDSPQLYWLCI
Sbjct: 173  R--VEVRNRDEDETS--VAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCI 228

Query: 903  XXXXXXXXXXXXXXXXXXXIGIAVCCCLPCIIAILYAVAEQEGATTEDINQLPKYKFRKI 1082
                               IGIAVCCCLPCIIAILY VA+QEGAT E+I +LPKYKFR+I
Sbjct: 229  VFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRI 288

Query: 1083 GDFEKVNGEAQGPFGGIMTECDTDTPIEHVLQMENAECCICLSAYDDGAELRELPCRHHF 1262
            G+ EK+NGE Q  FGGIMTECDTDTP+EHV+  E+AECCICLSAY+D  ELRELPCRH F
Sbjct: 289  GESEKLNGEIQESFGGIMTECDTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRF 348

Query: 1263 HCACIDKWLYINATCPLCKYNIIKSGNGS 1349
            HC CIDKWLYINATCPLCK NI+K+ + S
Sbjct: 349  HCTCIDKWLYINATCPLCKLNILKNASQS 377


>emb|CBI38762.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  405 bits (1042), Expect = e-110
 Identities = 203/328 (61%), Positives = 227/328 (69%), Gaps = 2/328 (0%)
 Frame = +3

Query: 372  MREPSMLVXXXXXXXXXXXXSDWAYSKPVVFLDIIWNXXXXXXXXXXXXXXRNENPIMPL 551
            MREPSM V            SDWAYSKP+V LDI+WN              R+E P  PL
Sbjct: 1    MREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPL 60

Query: 552  RLWILGYALQCVLHMVFVCMEYRRRHP--PNGPLVQQNLGNDIETGSSTSSIEGDGRDGA 725
            RLWI+GY LQCVLHMV VC+EY+RR     +G L +          SS+ S EGD  D  
Sbjct: 61   RLWIIGYGLQCVLHMVCVCVEYKRRRRLVSSGALERSGGWGSGHLSSSSGSDEGDPIDYR 120

Query: 726  DFLGERHEGEDNTSESVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCIX 905
              +  R+  ED TS  VAKHLESANTMFSFIWWIIGFYWVSAGG DLTRDSPQLYWLCI 
Sbjct: 121  --VEVRNRDEDETS--VAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIV 176

Query: 906  XXXXXXXXXXXXXXXXXXIGIAVCCCLPCIIAILYAVAEQEGATTEDINQLPKYKFRKIG 1085
                              IGIAVCCCLPCIIAILY VA+QEGAT E+I +LPKYKFR+IG
Sbjct: 177  FLAFDVFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRIG 236

Query: 1086 DFEKVNGEAQGPFGGIMTECDTDTPIEHVLQMENAECCICLSAYDDGAELRELPCRHHFH 1265
            + EK+NGE Q  FGGIMTECDTDTP+EHV+  E+AECCICLSAY+D  ELRELPCRH FH
Sbjct: 237  ESEKLNGEIQESFGGIMTECDTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFH 296

Query: 1266 CACIDKWLYINATCPLCKYNIIKSGNGS 1349
            C CIDKWLYINATCPLCK NI+K+ + S
Sbjct: 297  CTCIDKWLYINATCPLCKLNILKNASQS 324


>ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
            [Vitis vinifera]
          Length = 392

 Score =  404 bits (1039), Expect = e-110
 Identities = 200/336 (59%), Positives = 228/336 (67%), Gaps = 5/336 (1%)
 Frame = +3

Query: 369  IMREPSMLVXXXXXXXXXXXXSDWAYSKPVVFLDIIWNXXXXXXXXXXXXXXRNENPIMP 548
            +MREPSMLV            SDWAYSKPVV LD+IWN              R E+P MP
Sbjct: 58   MMREPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMP 117

Query: 549  LRLWILGYALQCVLHMVFVCMEYRRRHPPNGPLVQQNLGNDIETGSSTSSIEGDGRDGAD 728
            LR WI+GYALQC+LH+V V +EYRRR    G    ++ G     GS +SS +GD      
Sbjct: 118  LRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIG-SGGSYSSSPQGDSSQYVT 176

Query: 729  FLG-ERHEGED----NTSESVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYW 893
                + H  +     +   SVAKHLESANTMFSFIWWIIGFYWVSAGG  L RDSPQLYW
Sbjct: 177  LANVDEHHSQTCQFLSLLSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYW 236

Query: 894  LCIXXXXXXXXXXXXXXXXXXXIGIAVCCCLPCIIAILYAVAEQEGATTEDINQLPKYKF 1073
            LCI                   IGIAVCCCLPCIIAILYAVA+QEGA+ EDI+QL ++KF
Sbjct: 237  LCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKF 296

Query: 1074 RKIGDFEKVNGEAQGPFGGIMTECDTDTPIEHVLQMENAECCICLSAYDDGAELRELPCR 1253
            RK+GD EK++G+ QG  GGIMTEC TD P EHVL  E+AECCICLSAYDDG ELRELPC 
Sbjct: 297  RKVGDIEKIDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCG 356

Query: 1254 HHFHCACIDKWLYINATCPLCKYNIIKSGNGSREEI 1361
            HHFHC C+DKWLYINATCPLCKYNI+KS +  REE+
Sbjct: 357  HHFHCTCVDKWLYINATCPLCKYNILKSSSNGREEV 392