BLASTX nr result

ID: Coptis25_contig00005256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005256
         (1295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515120.1| carbon catabolite repressor protein, putativ...   492   e-136
ref|XP_002270121.1| PREDICTED: uncharacterized calcium-binding p...   489   e-136
emb|CAN73791.1| hypothetical protein VITISV_034892 [Vitis vinifera]   489   e-136
ref|XP_002317830.1| predicted protein [Populus trichocarpa] gi|2...   488   e-135
ref|XP_004137201.1| PREDICTED: uncharacterized calcium-binding p...   484   e-134

>ref|XP_002515120.1| carbon catabolite repressor protein, putative [Ricinus communis]
            gi|223545600|gb|EEF47104.1| carbon catabolite repressor
            protein, putative [Ricinus communis]
          Length = 471

 Score =  492 bits (1266), Expect = e-136
 Identities = 241/339 (71%), Positives = 275/339 (81%), Gaps = 10/339 (2%)
 Frame = +3

Query: 3    DGLLTAVHKDYFRIVDYRDLLFNDFGDRVAQILHVESVIPFWQCLNGDVQQEILIVNTHL 182
            DGLLTAVHKDYF +++Y++LLFNDFGDRVAQ+LHV+S +P  QC  GDVQQE LIVNTHL
Sbjct: 138  DGLLTAVHKDYFTVLNYQELLFNDFGDRVAQLLHVQSAVPLLQCQTGDVQQEFLIVNTHL 197

Query: 183  LFPHNSSLSIVRLHQVYKILQYVETYKKENKLNSMPTILCGDLNGSKRGHVYKFLRSQGF 362
            LFPH+SSLSIVRLHQVYKILQYVETY+++NKL+ MP ILCGD NGSKRGHVYKFLRSQGF
Sbjct: 198  LFPHDSSLSIVRLHQVYKILQYVETYQRDNKLSHMPIILCGDWNGSKRGHVYKFLRSQGF 257

Query: 363  VSSYDTAHQYTDSDADAHKWVSHRNHRGNICGVDFIWLLNPTKYKKPLKTSWSEAVFSII 542
            VSSYD AHQYTDSDADAHKWVSHRNHRGNICGVDFIWL NP K KKPLKTSW EAVF II
Sbjct: 258  VSSYDIAHQYTDSDADAHKWVSHRNHRGNICGVDFIWLRNPNKSKKPLKTSWYEAVFGII 317

Query: 543  KYQLREASLLETDAFAFLKADSPGEYITFSGFSEALHQLCLTGHPHGLSAEETKDLWNKA 722
            K QL +ASL E DAFAFLKAD PG++IT+S F E L Q+ L G P+GLS ++TKDLW +A
Sbjct: 318  KCQLLKASLTENDAFAFLKADEPGDFITYSAFCEGLRQVNLIGLPYGLSFQQTKDLWIRA 377

Query: 723  DIDGNGVVNYKEFQKRIWN----------PARFELTEKGFEDGGAEETEEHSVGFNVKNA 872
            DIDGNG+V+Y+EF++RIWN          P   E  E+G E+G      E ++GF VKNA
Sbjct: 378  DIDGNGIVDYEEFKERIWNSSCPEQEEQCPGSIEDPEQGKEEG------EGAIGFAVKNA 431

Query: 873  DLFPSEVEKGTWPEDYLLSDHARLTVVFSPARVPCSPTV 989
             LFP E EKG WPE+Y LSDHARLTVVFSP R+  S  +
Sbjct: 432  VLFPREAEKGLWPENYSLSDHARLTVVFSPVRMHSSQQI 470


>ref|XP_002270121.1| PREDICTED: uncharacterized calcium-binding protein At1g02270 [Vitis
            vinifera] gi|302144002|emb|CBI23107.3| unnamed protein
            product [Vitis vinifera]
          Length = 451

 Score =  489 bits (1259), Expect = e-136
 Identities = 239/329 (72%), Positives = 272/329 (82%), Gaps = 3/329 (0%)
 Frame = +3

Query: 3    DGLLTAVHKDYFRIVDYRDLLFNDFGDRVAQILHVESVIPFWQCLNGDVQQEILIVNTHL 182
            DGLLT+VHKDYFR++++R LLFNDFGDRVAQ+LHVE V PF  C + +  QEILIVNTHL
Sbjct: 121  DGLLTSVHKDYFRVLNHRALLFNDFGDRVAQLLHVELVAPFPHCRSSNTHQEILIVNTHL 180

Query: 183  LFPHNSSLSIVRLHQVYKILQYVETYKKENKLNSMPTILCGDLNGSKRGHVYKFLRSQGF 362
            LFPH+S+L I+RL QVYKILQYVE+Y+KENKLN MP ILCGD NGSK GHVYKFLRSQGF
Sbjct: 181  LFPHDSTLCIIRLQQVYKILQYVESYQKENKLNPMPIILCGDWNGSKSGHVYKFLRSQGF 240

Query: 363  VSSYDTAHQYTDSDADAHKWVSHRNHRGNICGVDFIWLLNPTKYKKPLKTSWSEAVFSII 542
            VSSYDTAHQYT  DAD HKWVSHRNHRGNICGVDFIWLLNP +Y+K LKTSWSEAVF + 
Sbjct: 241  VSSYDTAHQYT--DADEHKWVSHRNHRGNICGVDFIWLLNPNRYRKLLKTSWSEAVFGMF 298

Query: 543  KYQLREASLLETDAFAFLKADSPGEYITFSGFSEALHQLCLTGHPHGLSAEETKDLWNKA 722
            KY LR ASL E DAFAFLKAD+ G+ IT+SGF EAL QL LTGH HGLS EE  DLW +A
Sbjct: 299  KYLLRRASLTEDDAFAFLKADNHGDCITYSGFCEALRQLNLTGHCHGLSDEEINDLWVQA 358

Query: 723  DIDGNGVVNYKEFQKRIWNPARFELTEKGFEDGGAE---ETEEHSVGFNVKNADLFPSEV 893
            DIDGNGV++YKEFQKRIWNP   +  ++   +   E     +E ++GF+VKNA LFPSEV
Sbjct: 359  DIDGNGVLDYKEFQKRIWNPTWSQQRDENINEAWDEVMKGPKEQAIGFSVKNAVLFPSEV 418

Query: 894  EKGTWPEDYLLSDHARLTVVFSPARVPCS 980
            EKG WPE+Y LSDHARLTVVFSP R+PC+
Sbjct: 419  EKGMWPENYSLSDHARLTVVFSPVRMPCA 447


>emb|CAN73791.1| hypothetical protein VITISV_034892 [Vitis vinifera]
          Length = 445

 Score =  489 bits (1259), Expect = e-136
 Identities = 239/329 (72%), Positives = 272/329 (82%), Gaps = 3/329 (0%)
 Frame = +3

Query: 3    DGLLTAVHKDYFRIVDYRDLLFNDFGDRVAQILHVESVIPFWQCLNGDVQQEILIVNTHL 182
            DGLLT+VHKDYFR++++R LLFNDFGDRVAQ+LHVE V PF  C + +  QEILIVNTHL
Sbjct: 115  DGLLTSVHKDYFRVLNHRALLFNDFGDRVAQLLHVELVAPFPHCRSSNTHQEILIVNTHL 174

Query: 183  LFPHNSSLSIVRLHQVYKILQYVETYKKENKLNSMPTILCGDLNGSKRGHVYKFLRSQGF 362
            LFPH+S+L I+RL QVYKILQYVE+Y+KENKLN MP ILCGD NGSK GHVYKFLRSQGF
Sbjct: 175  LFPHDSTLCIIRLQQVYKILQYVESYQKENKLNPMPIILCGDWNGSKSGHVYKFLRSQGF 234

Query: 363  VSSYDTAHQYTDSDADAHKWVSHRNHRGNICGVDFIWLLNPTKYKKPLKTSWSEAVFSII 542
            VSSYDTAHQYT  DAD HKWVSHRNHRGNICGVDFIWLLNP +Y+K LKTSWSEAVF + 
Sbjct: 235  VSSYDTAHQYT--DADEHKWVSHRNHRGNICGVDFIWLLNPNRYRKLLKTSWSEAVFGMF 292

Query: 543  KYQLREASLLETDAFAFLKADSPGEYITFSGFSEALHQLCLTGHPHGLSAEETKDLWNKA 722
            KY LR ASL E DAFAFLKAD+ G+ IT+SGF EAL QL LTGH HGLS EE  DLW +A
Sbjct: 293  KYLLRRASLTEDDAFAFLKADNHGDCITYSGFCEALRQLNLTGHCHGLSDEEINDLWVQA 352

Query: 723  DIDGNGVVNYKEFQKRIWNPARFELTEKGFEDGGAE---ETEEHSVGFNVKNADLFPSEV 893
            DIDGNGV++YKEFQKRIWNP   +  ++   +   E     +E ++GF+VKNA LFPSEV
Sbjct: 353  DIDGNGVLDYKEFQKRIWNPTWSQQRDENINEAWDEVMKGPKEQAIGFSVKNAVLFPSEV 412

Query: 894  EKGTWPEDYLLSDHARLTVVFSPARVPCS 980
            EKG WPE+Y LSDHARLTVVFSP R+PC+
Sbjct: 413  EKGMWPENYSLSDHARLTVVFSPVRMPCA 441


>ref|XP_002317830.1| predicted protein [Populus trichocarpa] gi|222858503|gb|EEE96050.1|
            predicted protein [Populus trichocarpa]
          Length = 451

 Score =  488 bits (1256), Expect = e-135
 Identities = 238/329 (72%), Positives = 272/329 (82%)
 Frame = +3

Query: 3    DGLLTAVHKDYFRIVDYRDLLFNDFGDRVAQILHVESVIPFWQCLNGDVQQEILIVNTHL 182
            DGLL AV KDYFR++++R+LLFND GDRVAQ+LHVE   P   C N D +QEILIVNTHL
Sbjct: 124  DGLLIAVRKDYFRVINHRELLFNDCGDRVAQLLHVELAAPCSPCRNNDTRQEILIVNTHL 183

Query: 183  LFPHNSSLSIVRLHQVYKILQYVETYKKENKLNSMPTILCGDLNGSKRGHVYKFLRSQGF 362
            LFPH+SSLS+VRL+QVYKILQYVE+Y+KENKL+  P +LCGD NGSKRGHVYKFLRSQGF
Sbjct: 184  LFPHDSSLSLVRLNQVYKILQYVESYQKENKLSPTPIMLCGDWNGSKRGHVYKFLRSQGF 243

Query: 363  VSSYDTAHQYTDSDADAHKWVSHRNHRGNICGVDFIWLLNPTKYKKPLKTSWSEAVFSII 542
            VSSYDTAHQYTD  ADAHKWVSH NHRGNICGVDFIWLLNP +Y+K LKTSWSEAVF + 
Sbjct: 244  VSSYDTAHQYTD--ADAHKWVSHLNHRGNICGVDFIWLLNPNRYRKLLKTSWSEAVFGMF 301

Query: 543  KYQLREASLLETDAFAFLKADSPGEYITFSGFSEALHQLCLTGHPHGLSAEETKDLWNKA 722
            KY LR ASL E DAFAFLKADS  + IT+SGF EAL QL LTGH +GLS EETKDLW +A
Sbjct: 302  KYLLRRASLTEEDAFAFLKADSDSDCITYSGFCEALQQLNLTGHCYGLSDEETKDLWVQA 361

Query: 723  DIDGNGVVNYKEFQKRIWNPARFELTEKGFEDGGAEETEEHSVGFNVKNADLFPSEVEKG 902
            DIDGNGV++YKEFQ+RIWNP   E  +   +D   +  EE ++GF+V+NA LFP EVEKG
Sbjct: 362  DIDGNGVLDYKEFQQRIWNPTWSEEKDDEIQDDNLKGREEQTIGFSVENAVLFPPEVEKG 421

Query: 903  TWPEDYLLSDHARLTVVFSPARVPCSPTV 989
             WPE+Y LSDHARLTVVFSP R+PCS  +
Sbjct: 422  MWPENYSLSDHARLTVVFSPIRMPCSQLI 450


>ref|XP_004137201.1| PREDICTED: uncharacterized calcium-binding protein At1g02270-like
            [Cucumis sativus] gi|449483236|ref|XP_004156530.1|
            PREDICTED: uncharacterized calcium-binding protein
            At1g02270-like [Cucumis sativus]
          Length = 447

 Score =  484 bits (1247), Expect = e-134
 Identities = 233/329 (70%), Positives = 272/329 (82%)
 Frame = +3

Query: 3    DGLLTAVHKDYFRIVDYRDLLFNDFGDRVAQILHVESVIPFWQCLNGDVQQEILIVNTHL 182
            DGLLTAVHKDYFR+V+YR+LLFND GDRVAQ+LHVE  +PF  C N D++QEILIVNTHL
Sbjct: 121  DGLLTAVHKDYFRVVNYRELLFNDCGDRVAQLLHVELAVPFSHCRNNDIRQEILIVNTHL 180

Query: 183  LFPHNSSLSIVRLHQVYKILQYVETYKKENKLNSMPTILCGDLNGSKRGHVYKFLRSQGF 362
            LFPH+SSL +VRL+QVYKILQYVE+Y+KENKLN MP ILCGD NGSKRGHVYKFLRSQGF
Sbjct: 181  LFPHDSSLCLVRLNQVYKILQYVESYQKENKLNPMPIILCGDWNGSKRGHVYKFLRSQGF 240

Query: 363  VSSYDTAHQYTDSDADAHKWVSHRNHRGNICGVDFIWLLNPTKYKKPLKTSWSEAVFSII 542
            VSSYDTAHQYT  DAD+ KWVSHRNHRGNICGVDFIWLLNP  Y++ LK SWSEA+F + 
Sbjct: 241  VSSYDTAHQYT--DADSRKWVSHRNHRGNICGVDFIWLLNPNGYRRLLKASWSEAIFGMF 298

Query: 543  KYQLREASLLETDAFAFLKADSPGEYITFSGFSEALHQLCLTGHPHGLSAEETKDLWNKA 722
            KY LR ASL   DAFAFLKAD+ G+YIT+SGF E L QL LTGH HGLS EE  DLW +A
Sbjct: 299  KYLLRRASLTADDAFAFLKADNDGDYITYSGFCEGLRQLNLTGHLHGLSVEEINDLWVQA 358

Query: 723  DIDGNGVVNYKEFQKRIWNPARFELTEKGFEDGGAEETEEHSVGFNVKNADLFPSEVEKG 902
            D DGNG++++ EFQ RIWN    E  ++   +  ++E +E ++GF+V+NA LFP+EVEKG
Sbjct: 359  DSDGNGILDHNEFQ-RIWNSTGTEKRDEKSNEIESKENQEQTIGFSVENAVLFPAEVEKG 417

Query: 903  TWPEDYLLSDHARLTVVFSPARVPCSPTV 989
             WPEDY LSDHARLTVVF+P R+PCS  +
Sbjct: 418  RWPEDYSLSDHARLTVVFAPIRMPCSQLI 446


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