BLASTX nr result

ID: Coptis25_contig00005248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005248
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279073.2| PREDICTED: uncharacterized protein LOC100247...    55   5e-09
emb|CBI27037.3| unnamed protein product [Vitis vinifera]               55   5e-09
emb|CBI19480.3| unnamed protein product [Vitis vinifera]               65   7e-09
ref|XP_002284966.1| PREDICTED: probable WRKY transcription facto...    65   7e-09
emb|CAN68345.1| hypothetical protein VITISV_004019 [Vitis vinifera]    55   1e-08

>ref|XP_002279073.2| PREDICTED: uncharacterized protein LOC100247382 [Vitis vinifera]
          Length = 1119

 Score = 55.5 bits (132), Expect(2) = 5e-09
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = -3

Query: 108 TVVHAKDLRVGKGEPEEVAIKIIRNNDTMFSKSL 7
           TVV AKDL+ G GEPEEVAIKIIRNNDTM+   L
Sbjct: 814 TVVRAKDLKAGNGEPEEVAIKIIRNNDTMYKAGL 847



 Score = 30.4 bits (67), Expect(2) = 5e-09
 Identities = 11/14 (78%), Positives = 14/14 (100%)
 Frame = -2

Query: 154 SYRFGEVLDGRYEV 113
           S+RFGE+LDGRYE+
Sbjct: 790 SHRFGEILDGRYEI 803


>emb|CBI27037.3| unnamed protein product [Vitis vinifera]
          Length = 998

 Score = 55.5 bits (132), Expect(2) = 5e-09
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = -3

Query: 108 TVVHAKDLRVGKGEPEEVAIKIIRNNDTMFSKSL 7
           TVV AKDL+ G GEPEEVAIKIIRNNDTM+   L
Sbjct: 693 TVVRAKDLKAGNGEPEEVAIKIIRNNDTMYKAGL 726



 Score = 30.4 bits (67), Expect(2) = 5e-09
 Identities = 11/14 (78%), Positives = 14/14 (100%)
 Frame = -2

Query: 154 SYRFGEVLDGRYEV 113
           S+RFGE+LDGRYE+
Sbjct: 669 SHRFGEILDGRYEI 682


>emb|CBI19480.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
 Frame = -1

Query: 587 Y*KDAFTSNMEENTIEEATSPTHQGTDNLIVL------QDHPNTSVETEMDREVASDVAI 426
           Y  D+F + ME+N ++EA S   Q  + L+ L      Q    TS+E ++D    +D+A+
Sbjct: 9   YANDSFAAKMEDNALQEAASAGIQSVEKLVKLLSQCQQQKQTTTSLEIDIDCTAVADMAV 68

Query: 425 NEFKRVNSLLG*TRKGHARFIRAP 354
            +FKRV SLL  TR GHARF RAP
Sbjct: 69  TKFKRVISLLDRTRTGHARFRRAP 92


>ref|XP_002284966.1| PREDICTED: probable WRKY transcription factor 7 [Vitis vinifera]
          Length = 347

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
 Frame = -1

Query: 587 Y*KDAFTSNMEENTIEEATSPTHQGTDNLIVL------QDHPNTSVETEMDREVASDVAI 426
           Y  D+F + ME+N ++EA S   Q  + L+ L      Q    TS+E ++D    +D+A+
Sbjct: 9   YANDSFAAKMEDNALQEAASAGIQSVEKLVKLLSQCQQQKQTTTSLEIDIDCTAVADMAV 68

Query: 425 NEFKRVNSLLG*TRKGHARFIRAP 354
            +FKRV SLL  TR GHARF RAP
Sbjct: 69  TKFKRVISLLDRTRTGHARFRRAP 92


>emb|CAN68345.1| hypothetical protein VITISV_004019 [Vitis vinifera]
          Length = 1121

 Score = 55.5 bits (132), Expect(2) = 1e-08
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = -3

Query: 108 TVVHAKDLRVGKGEPEEVAIKIIRNNDTMFSKSL 7
           TVV AKDL+ G GEPEEVAIKIIRNNDTM+   L
Sbjct: 804 TVVRAKDLKAGNGEPEEVAIKIIRNNDTMYKAGL 837



 Score = 28.9 bits (63), Expect(2) = 1e-08
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = -2

Query: 151 YRFGEVLDGRYEV 113
           +RFGE+LDGRYE+
Sbjct: 781 HRFGEILDGRYEI 793


Top