BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005241
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282158.2| PREDICTED: WD repeat-containing protein 85 i...   229   9e-58
ref|XP_002282151.1| PREDICTED: WD repeat-containing protein 85 i...   229   9e-58
ref|XP_002282140.1| PREDICTED: WD repeat-containing protein 85 i...   229   9e-58
ref|XP_002330481.1| predicted protein [Populus trichocarpa] gi|2...   223   4e-56
ref|XP_003617841.1| WD repeat-containing protein [Medicago trunc...   216   8e-54

>ref|XP_002282158.2| PREDICTED: WD repeat-containing protein 85 isoform 3 [Vitis
           vinifera]
          Length = 341

 Score =  229 bits (583), Expect = 9e-58
 Identities = 106/146 (72%), Positives = 121/146 (82%), Gaps = 7/146 (4%)
 Frame = +3

Query: 3   SPSSLAFQNKKTHKMGICCIAKSPADHNTLLTGSYDEYLRVWDVRSISKPINESSICLGG 182
           SPS LAFQN K HKMG+CCIAKSP+D N +LTGSYDE+LR+WDVRSI KP+NE+SICLGG
Sbjct: 192 SPSKLAFQNSKVHKMGVCCIAKSPSDPNLVLTGSYDEHLRLWDVRSIIKPVNETSICLGG 251

Query: 183 GVWRIKHHPSIPGLILAACMHNGFAVVSAKNDNVLLMETYGKHNSLAYGADWQRGERER- 359
           GVWRIKHHPS+PGL+LAACMHNGFAVV  K +   ++ETY KH SLAYGADWQRG+  R 
Sbjct: 252 GVWRIKHHPSVPGLVLAACMHNGFAVVKTKGEEPEVIETYSKHESLAYGADWQRGDLCRK 311

Query: 360 ------SVVATCSFYDRLLRVWMPET 419
                 SVVATCSFYDRLLR+W  E+
Sbjct: 312 GQNNGGSVVATCSFYDRLLRIWTTES 337


>ref|XP_002282151.1| PREDICTED: WD repeat-containing protein 85 isoform 2 [Vitis
           vinifera]
          Length = 353

 Score =  229 bits (583), Expect = 9e-58
 Identities = 106/146 (72%), Positives = 121/146 (82%), Gaps = 7/146 (4%)
 Frame = +3

Query: 3   SPSSLAFQNKKTHKMGICCIAKSPADHNTLLTGSYDEYLRVWDVRSISKPINESSICLGG 182
           SPS LAFQN K HKMG+CCIAKSP+D N +LTGSYDE+LR+WDVRSI KP+NE+SICLGG
Sbjct: 204 SPSKLAFQNSKVHKMGVCCIAKSPSDPNLVLTGSYDEHLRLWDVRSIIKPVNETSICLGG 263

Query: 183 GVWRIKHHPSIPGLILAACMHNGFAVVSAKNDNVLLMETYGKHNSLAYGADWQRGERER- 359
           GVWRIKHHPS+PGL+LAACMHNGFAVV  K +   ++ETY KH SLAYGADWQRG+  R 
Sbjct: 264 GVWRIKHHPSVPGLVLAACMHNGFAVVKTKGEEPEVIETYSKHESLAYGADWQRGDLCRK 323

Query: 360 ------SVVATCSFYDRLLRVWMPET 419
                 SVVATCSFYDRLLR+W  E+
Sbjct: 324 GQNNGGSVVATCSFYDRLLRIWTTES 349


>ref|XP_002282140.1| PREDICTED: WD repeat-containing protein 85 isoform 1 [Vitis
           vinifera]
          Length = 349

 Score =  229 bits (583), Expect = 9e-58
 Identities = 106/146 (72%), Positives = 121/146 (82%), Gaps = 7/146 (4%)
 Frame = +3

Query: 3   SPSSLAFQNKKTHKMGICCIAKSPADHNTLLTGSYDEYLRVWDVRSISKPINESSICLGG 182
           SPS LAFQN K HKMG+CCIAKSP+D N +LTGSYDE+LR+WDVRSI KP+NE+SICLGG
Sbjct: 200 SPSKLAFQNSKVHKMGVCCIAKSPSDPNLVLTGSYDEHLRLWDVRSIIKPVNETSICLGG 259

Query: 183 GVWRIKHHPSIPGLILAACMHNGFAVVSAKNDNVLLMETYGKHNSLAYGADWQRGERER- 359
           GVWRIKHHPS+PGL+LAACMHNGFAVV  K +   ++ETY KH SLAYGADWQRG+  R 
Sbjct: 260 GVWRIKHHPSVPGLVLAACMHNGFAVVKTKGEEPEVIETYSKHESLAYGADWQRGDLCRK 319

Query: 360 ------SVVATCSFYDRLLRVWMPET 419
                 SVVATCSFYDRLLR+W  E+
Sbjct: 320 GQNNGGSVVATCSFYDRLLRIWTTES 345


>ref|XP_002330481.1| predicted protein [Populus trichocarpa] gi|222871893|gb|EEF09024.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  223 bits (569), Expect = 4e-56
 Identities = 101/144 (70%), Positives = 119/144 (82%), Gaps = 6/144 (4%)
 Frame = +3

Query: 6   PSSLAFQNKKTHKMGICCIAKSPADHNTLLTGSYDEYLRVWDVRSISKPINESSICLGGG 185
           PS+L FQN K HKMG+CCIAKSP D N LLTGSYDEYLR+WDVRSISKP+NE+S+CLGGG
Sbjct: 77  PSNLVFQNSKVHKMGVCCIAKSPRDPNILLTGSYDEYLRLWDVRSISKPVNETSVCLGGG 136

Query: 186 VWRIKHHPSIPGLILAACMHNGFAVVSAKNDNVLLMETYGKHNSLAYGADWQRG------ 347
           VWR+KHHP +PG++LAACMHN FAVV    +   +METY KH SLAYGADWQRG      
Sbjct: 137 VWRVKHHPYVPGVVLAACMHNCFAVVKIDEEKGEVMETYTKHGSLAYGADWQRGNLSHKV 196

Query: 348 ERERSVVATCSFYDRLLRVWMPET 419
           ++  SVVATCSFYDRLL++W+PE+
Sbjct: 197 KQNSSVVATCSFYDRLLQIWIPES 220


>ref|XP_003617841.1| WD repeat-containing protein [Medicago truncatula]
           gi|355519176|gb|AET00800.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 421

 Score =  216 bits (549), Expect = 8e-54
 Identities = 99/143 (69%), Positives = 116/143 (81%), Gaps = 6/143 (4%)
 Frame = +3

Query: 3   SPSSLAFQNKKTHKMGICCIAKSPADHNTLLTGSYDEYLRVWDVRSISKPINESSICLGG 182
           SPS L F+N K HKMG+ CI KSP D NTLLTGSYDE+LRVWD+RSISKP+NE+SI LGG
Sbjct: 271 SPSKLVFKNSKVHKMGVTCIEKSPHDPNTLLTGSYDEFLRVWDLRSISKPVNETSISLGG 330

Query: 183 GVWRIKHHPSIPGLILAACMHNGFAVVSAKNDNVLLMETYGKHNSLAYGADWQRGE---- 350
           GVWR+KHHP I GL+LAACMHNGFA+V+ K D   ++ETY KH+SLAYGADWQ+GE    
Sbjct: 331 GVWRVKHHPFIQGLVLAACMHNGFAIVAIKGDKAEVLETYKKHDSLAYGADWQKGEANHT 390

Query: 351 --RERSVVATCSFYDRLLRVWMP 413
               + VVATCSFYD+L+RVW P
Sbjct: 391 KGSSKPVVATCSFYDKLVRVWRP 413