BLASTX nr result

ID: Coptis25_contig00005239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005239
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [V...    55   6e-06
gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera]                  55   6e-06
emb|CAN82189.1| hypothetical protein VITISV_031114 [Vitis vinifera]    55   6e-06

>ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [Vitis vinifera]
           gi|296082356|emb|CBI21361.3| unnamed protein product
           [Vitis vinifera]
          Length = 789

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -3

Query: 334 VCPVVGILTRQDLRAHNILNAFPHLAKTKTR*MG 233
           V PVVGILTRQDLRA+NIL AFPHLAK+K R  G
Sbjct: 755 VSPVVGILTRQDLRAYNILTAFPHLAKSKEREKG 788


>gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera]
          Length = 789

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -3

Query: 334 VCPVVGILTRQDLRAHNILNAFPHLAKTKTR*MG 233
           V PVVGILTRQDLRA+NIL AFPHLAK+K R  G
Sbjct: 755 VSPVVGILTRQDLRAYNILTAFPHLAKSKEREKG 788


>emb|CAN82189.1| hypothetical protein VITISV_031114 [Vitis vinifera]
          Length = 753

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -3

Query: 334 VCPVVGILTRQDLRAHNILNAFPHLAKTKTR*MG 233
           V PVVGILTRQDLRA+NIL AFPHLAK+K R  G
Sbjct: 719 VSPVVGILTRQDLRAYNILTAFPHLAKSKEREKG 752


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