BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005236
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucu...   207   1e-51
ref|XP_002311634.1| predicted protein [Populus trichocarpa] gi|2...   191   1e-46
ref|XP_002279112.2| PREDICTED: protein RDM1 [Vitis vinifera]          189   4e-46
emb|CBI26288.3| unnamed protein product [Vitis vinifera]              189   4e-46
ref|XP_003610752.1| hypothetical protein MTR_5g006610 [Medicago ...   182   4e-44

>ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucumis sativus]
           gi|449432682|ref|XP_004134128.1| PREDICTED: protein
           RDM1-like isoform 2 [Cucumis sativus]
           gi|449504162|ref|XP_004162269.1| PREDICTED: protein
           RDM1-like isoform 1 [Cucumis sativus]
           gi|449504166|ref|XP_004162270.1| PREDICTED: protein
           RDM1-like isoform 2 [Cucumis sativus]
          Length = 174

 Score =  207 bits (528), Expect = 1e-51
 Identities = 93/133 (69%), Positives = 112/133 (84%)
 Frame = -2

Query: 541 FCLPAKQITAEGTVLKRAEMYQEYMKLIQIPSLHGSAIPFTTWQGLAKSLKQLYGQPLHY 362
           F +PAK++T+EG ++KRAEMYQEYMK IQIP+  GS IPFTTW GL KS+KQLYGQPLHY
Sbjct: 42  FKIPAKEMTSEGMLMKRAEMYQEYMKQIQIPAQRGSVIPFTTWMGLGKSIKQLYGQPLHY 101

Query: 361 LTNVALKQLDQSRIGSENEHQPLDAVIHPRKAEATIWLMEEVHRLTSSHHHLGNLWLLDP 182
           LTN+ LKQ DQ R+GS +E++PLD VIHP KAEAT+WL+EE+HR TSSHHH+  LWL DP
Sbjct: 102 LTNILLKQWDQLRLGSADEYKPLDTVIHPSKAEATVWLVEEIHRRTSSHHHVAKLWLSDP 161

Query: 181 MHHAFVDPIIPQI 143
           MH A+VD I PQ+
Sbjct: 162 MHQAYVDSIFPQL 174


>ref|XP_002311634.1| predicted protein [Populus trichocarpa] gi|222851454|gb|EEE89001.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  191 bits (485), Expect = 1e-46
 Identities = 86/130 (66%), Positives = 105/130 (80%)
 Frame = -2

Query: 532 PAKQITAEGTVLKRAEMYQEYMKLIQIPSLHGSAIPFTTWQGLAKSLKQLYGQPLHYLTN 353
           P K+ T+EG +++RAEMYQ+YM+ I IP   GSAIPF++W GL KS+KQLY QPLHYLTN
Sbjct: 46  PIKETTSEGVLIRRAEMYQDYMRHIPIPVQRGSAIPFSSWAGLGKSIKQLYQQPLHYLTN 105

Query: 352 VALKQLDQSRIGSENEHQPLDAVIHPRKAEATIWLMEEVHRLTSSHHHLGNLWLLDPMHH 173
           + L + DQ RIGSE+EH PLD +IHP KAEATIWL+EEVHR TSSHHH+  +W  DPMHH
Sbjct: 106 ILLNKWDQQRIGSEDEHTPLDIMIHPCKAEATIWLVEEVHRRTSSHHHVAKIWQSDPMHH 165

Query: 172 AFVDPIIPQI 143
           AFVD I P++
Sbjct: 166 AFVDSIFPKL 175


>ref|XP_002279112.2| PREDICTED: protein RDM1 [Vitis vinifera]
          Length = 137

 Score =  189 bits (480), Expect = 4e-46
 Identities = 88/130 (67%), Positives = 106/130 (81%)
 Frame = -2

Query: 532 PAKQITAEGTVLKRAEMYQEYMKLIQIPSLHGSAIPFTTWQGLAKSLKQLYGQPLHYLTN 353
           PA+Q   E  V++RAEMYQEYMK I IP+  GS IPF TW GLAKS+KQLYGQPLHYLTN
Sbjct: 8   PARQEPFEDVVIRRAEMYQEYMKQIPIPARRGSLIPFDTWMGLAKSIKQLYGQPLHYLTN 67

Query: 352 VALKQLDQSRIGSENEHQPLDAVIHPRKAEATIWLMEEVHRLTSSHHHLGNLWLLDPMHH 173
           + +KQ DQ RIGS++E++ LD++IHP KAEA+IWL+EEVHR T+S HH+  LWL DPMH+
Sbjct: 68  ILVKQWDQLRIGSKDENRSLDSIIHPSKAEASIWLIEEVHRQTTSPHHMAKLWLSDPMHY 127

Query: 172 AFVDPIIPQI 143
           AFVD I PQI
Sbjct: 128 AFVDSIFPQI 137


>emb|CBI26288.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score =  189 bits (480), Expect = 4e-46
 Identities = 88/130 (67%), Positives = 106/130 (81%)
 Frame = -2

Query: 532 PAKQITAEGTVLKRAEMYQEYMKLIQIPSLHGSAIPFTTWQGLAKSLKQLYGQPLHYLTN 353
           PA+Q   E  V++RAEMYQEYMK I IP+  GS IPF TW GLAKS+KQLYGQPLHYLTN
Sbjct: 45  PARQEPFEDVVIRRAEMYQEYMKQIPIPARRGSLIPFDTWMGLAKSIKQLYGQPLHYLTN 104

Query: 352 VALKQLDQSRIGSENEHQPLDAVIHPRKAEATIWLMEEVHRLTSSHHHLGNLWLLDPMHH 173
           + +KQ DQ RIGS++E++ LD++IHP KAEA+IWL+EEVHR T+S HH+  LWL DPMH+
Sbjct: 105 ILVKQWDQLRIGSKDENRSLDSIIHPSKAEASIWLIEEVHRQTTSPHHMAKLWLSDPMHY 164

Query: 172 AFVDPIIPQI 143
           AFVD I PQI
Sbjct: 165 AFVDSIFPQI 174


>ref|XP_003610752.1| hypothetical protein MTR_5g006610 [Medicago truncatula]
           gi|355512087|gb|AES93710.1| hypothetical protein
           MTR_5g006610 [Medicago truncatula]
           gi|388497794|gb|AFK36963.1| unknown [Medicago
           truncatula]
          Length = 179

 Score =  182 bits (463), Expect = 4e-44
 Identities = 81/130 (62%), Positives = 102/130 (78%)
 Frame = -2

Query: 532 PAKQITAEGTVLKRAEMYQEYMKLIQIPSLHGSAIPFTTWQGLAKSLKQLYGQPLHYLTN 353
           P+  + +   + +RA MYQ+YMK I IPS  GS IPFT+W GL +S+KQLYGQPLHYLTN
Sbjct: 46  PSSDVNSLDALTRRAAMYQDYMKHIPIPSSRGSLIPFTSWMGLGRSIKQLYGQPLHYLTN 105

Query: 352 VALKQLDQSRIGSENEHQPLDAVIHPRKAEATIWLMEEVHRLTSSHHHLGNLWLLDPMHH 173
           + LKQ DQ RIGSE+E+ PLD +IHPRKAE+TIWLMEE+HR TSSH H+ +LW  DPM+H
Sbjct: 106 ILLKQWDQLRIGSEDEYTPLDDIIHPRKAESTIWLMEEIHRQTSSHFHIADLWKKDPMYH 165

Query: 172 AFVDPIIPQI 143
            F+D I P++
Sbjct: 166 GFIDSIFPKL 175