BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005233
         (1367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   194   4e-47
ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   188   3e-45
ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   187   4e-45
gb|ACU19159.1| unknown [Glycine max]                                  186   2e-44
ref|XP_004134707.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   184   6e-44

>ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Vitis vinifera]
          Length = 253

 Score =  194 bits (493), Expect = 4e-47
 Identities = 110/249 (44%), Positives = 144/249 (57%), Gaps = 4/249 (1%)
 Frame = +1

Query: 172 MGVNQCYEEIFSHDEMLDGDQSYLKE-KSAHDPATVPDNCKGCFDCNICLDYARDPVVTL 348
           M + Q + E+ +  E  DGD S  K+ K+        +N  G FDCNICLD A DPVVTL
Sbjct: 1   MALEQDFPELAAQHES-DGDVSLQKKWKAISASEAASENSNGSFDCNICLDSAHDPVVTL 59

Query: 349 CGHLYCWPCIYKWIYSHSTSATADHQQQQCPVCKADVLDNTLVPLYGRGQVSPDAEPNSK 528
           CGHLYCWPCIYKW++  STS   + QQQ CPVCKA++   +LVPLYGRG  SP      K
Sbjct: 60  CGHLYCWPCIYKWLHVQSTSPVTE-QQQNCPVCKANISHTSLVPLYGRGP-SPSESETKK 117

Query: 529 DSLDLEIPCRPPAHGVHALITTNPNQQLHTRPDSSQSHFESDHNQNHQYNAP---ANSVA 699
             +   IP RPPAHGVH LITT  +  L++ P     H   +  Q+H    P       A
Sbjct: 118 LHVGPAIPRRPPAHGVHTLITTTTSASLNSHP---SRHLHPNPFQSHSQYFPHPYGGYAA 174

Query: 700 SPMLSLRGTTAHPMIWQFGDIVSTTVFRNPTEVGFFGYPSPYDQQLVGSSSPRARRQEMK 879
           +P L+   +  +P I  FG++V + +F   ++   F YP P    L+ S++PR RRQEM+
Sbjct: 175 TPTLT---SVLNPTIGMFGEMVFSRMF-GSSDTSLFAYPYPNTYPLMASANPRMRRQEMQ 230

Query: 880 DDESLNRIS 906
            D  LNR+S
Sbjct: 231 LDRCLNRVS 239


>ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 232

 Score =  188 bits (477), Expect = 3e-45
 Identities = 103/220 (46%), Positives = 137/220 (62%), Gaps = 1/220 (0%)
 Frame = +1

Query: 250 KSAHDPATVPDNCKGCFDCNICLDYARDPVVTLCGHLYCWPCIYKWIYSHSTSATADHQQ 429
           K+  + AT  +N  GCFDCNICLD+A +PVVTLCGHLYCWPCIYKW++  S S   D + 
Sbjct: 12  KTIPNAATETENSNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPD-EH 70

Query: 430 QQCPVCKADVLDNTLVPLYGRGQVSPDAEPNSKDSLDLEIPCRPPAHGVHALITTNPNQQ 609
            QCPVCKAD+ ++T+VPLYGRG  +         S D+ IP RP A  V AL+ T+  + 
Sbjct: 71  PQCPVCKADISNSTMVPLYGRGHAA--TAEGKTSSCDVFIPPRPSASCVQALLATSSQRG 128

Query: 610 LH-TRPDSSQSHFESDHNQNHQYNAPANSVASPMLSLRGTTAHPMIWQFGDIVSTTVFRN 786
            H    +  Q H+ S H    + +A      S ML+L G+  HP+   FG++V   VF N
Sbjct: 129 QHLPYRNPYQGHYFSSHPYQEEDDA-----TSQMLNL-GSHHHPVTGMFGEMVYARVFGN 182

Query: 787 PTEVGFFGYPSPYDQQLVGSSSPRARRQEMKDDESLNRIS 906
           P  +  + YP+ Y  QL+GS++PR RRQEM+  +SLNRIS
Sbjct: 183 PENL--YAYPNSY--QLMGSATPRLRRQEMQAHKSLNRIS 218


>ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 232

 Score =  187 bits (476), Expect = 4e-45
 Identities = 102/219 (46%), Positives = 137/219 (62%)
 Frame = +1

Query: 250 KSAHDPATVPDNCKGCFDCNICLDYARDPVVTLCGHLYCWPCIYKWIYSHSTSATADHQQ 429
           K+  +  T  +N  GCFDCNICLD+A +PVVTLCGHLYCWPCIYKW++  S S   D + 
Sbjct: 12  KTIPNAVTEAENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSDSLPPD-EH 70

Query: 430 QQCPVCKADVLDNTLVPLYGRGQVSPDAEPNSKDSLDLEIPCRPPAHGVHALITTNPNQQ 609
            QCPVCKAD+ ++T+VPLYGRG  +  AE  +  S D+ IP RP A    AL+ T+   Q
Sbjct: 71  PQCPVCKADISNSTMVPLYGRGHAATTAEGKTA-SCDVFIPPRPSASCAQALLATSQRGQ 129

Query: 610 LHTRPDSSQSHFESDHNQNHQYNAPANSVASPMLSLRGTTAHPMIWQFGDIVSTTVFRNP 789
                +  Q H+ + H    + +A      S ML+L G+  HP+   FG++V   VF NP
Sbjct: 130 HLPYRNPYQGHYFTSHPYQEEDDA-----TSQMLNL-GSHHHPVTGMFGEMVYARVFGNP 183

Query: 790 TEVGFFGYPSPYDQQLVGSSSPRARRQEMKDDESLNRIS 906
             +  + YP+ Y  QL+GS++PR RRQEM+  +SLNRIS
Sbjct: 184 ENL--YAYPNSY--QLMGSATPRLRRQEMQAHKSLNRIS 218


>gb|ACU19159.1| unknown [Glycine max]
          Length = 232

 Score =  186 bits (471), Expect = 2e-44
 Identities = 103/220 (46%), Positives = 137/220 (62%), Gaps = 1/220 (0%)
 Frame = +1

Query: 250 KSAHDPATVPDNCKGCFDCNICLDYARDPVVTLCGHLYCWPCIYKWIYSHSTSATADHQQ 429
           K+  + AT  +N  GCFDCNICLD+A +PVVTLCGHLYCWPCIYKW++  S S   D + 
Sbjct: 12  KTIPNAATETENSNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPD-EH 70

Query: 430 QQCPVCKADVLDNTLVPLYGRGQVSPDAEPNSKDSLDLEIPCRPPAHGVHALITTNPNQQ 609
            QCPVCKAD+ ++T+VPLYGRG  +         S D+ IP RP A  V AL+ T+  + 
Sbjct: 71  PQCPVCKADISNSTMVPLYGRGHAA--TAEGKTSSCDVFIPPRPFASCVQALLATSSQRG 128

Query: 610 LH-TRPDSSQSHFESDHNQNHQYNAPANSVASPMLSLRGTTAHPMIWQFGDIVSTTVFRN 786
            H    +  Q H+ S H    + +A      S ML+L G+  HP+   FG++V   VF N
Sbjct: 129 QHLPYRNPYQGHYFSFHPYQEEDDA-----TSQMLNL-GSHHHPVTGMFGEMVYARVFGN 182

Query: 787 PTEVGFFGYPSPYDQQLVGSSSPRARRQEMKDDESLNRIS 906
           P  +  + YP+ Y  QL+GS++PR RRQEM+  +SLNRIS
Sbjct: 183 PENL--YAYPNSY--QLMGSATPRLRRQEMQAHKSLNRIS 218


>ref|XP_004134707.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 2
           [Cucumis sativus] gi|449479350|ref|XP_004155576.1|
           PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like
           isoform 2 [Cucumis sativus]
          Length = 238

 Score =  184 bits (466), Expect = 6e-44
 Identities = 107/234 (45%), Positives = 136/234 (58%), Gaps = 9/234 (3%)
 Frame = +1

Query: 232 QSYLKEKSAHDPATVPDNCKGCFDCNICLDYARDPVVTLCGHLYCWPCIYKWIYSHSTSA 411
           + Y  +   H   T  +N KGCFDCNICLD+A +PVVTLCGHLYCWPCIYKW++  S S 
Sbjct: 4   EQYFAQGWKHVSGTERENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASL 63

Query: 412 TADHQQQQCPVCKADVLDNTLVPLYGRGQVSPDAEPNSKD-SLDLEIPCRPPAHGVHALI 588
             D +  QCPVCKAD+   T+VPLYGRGQ + + EP  K    D+ IP RP A G   L 
Sbjct: 64  AID-EHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACGNQILA 122

Query: 589 TTNPNQQLHTRPDSSQSHFESDHNQ-NHQYNAPAN---SVASPMLSLRGTT----AHPMI 744
           T + +QQ        Q  + + + + NH     AN     ASP+L+L  T+     HP++
Sbjct: 123 TPSTHQQ--------QLPYRNPYQRPNHDPLLFANYEEDSASPLLNLARTSFSSFHHPVV 174

Query: 745 WQFGDIVSTTVFRNPTEVGFFGYPSPYDQQLVGSSSPRARRQEMKDDESLNRIS 906
              GD V   VF N   +  + Y + Y  QL GSS  R RRQEM+ D+SLNRIS
Sbjct: 175 GMIGDFVHARVFGNSDNL--YSYRNSY--QLTGSSRNRLRRQEMQVDKSLNRIS 224