BLASTX nr result

ID: Coptis25_contig00005231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005231
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002436376.1| hypothetical protein SORBIDRAFT_10g001390 [S...    77   2e-12
ref|XP_002285392.1| PREDICTED: DAG protein, chloroplastic [Vitis...    77   2e-12
ref|NP_001150208.1| DAG protein [Zea mays] gi|195637572|gb|ACG38...    77   2e-12
ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|2...    77   3e-12
ref|XP_002315577.1| predicted protein [Populus trichocarpa] gi|2...    76   4e-12

>ref|XP_002436376.1| hypothetical protein SORBIDRAFT_10g001390 [Sorghum bicolor]
           gi|241914599|gb|EER87743.1| hypothetical protein
           SORBIDRAFT_10g001390 [Sorghum bicolor]
          Length = 222

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 42/89 (47%), Positives = 55/89 (61%)
 Frame = +3

Query: 120 CKSDHWLVHLKDPECLFSNYTKCIRYCVRLLAEVVGSEDEAKEKIYVVWCAEPFGFGAEI 299
           C  +HWL+ +  P    +N  + I   ++ LA+V+GSE+EAK KIY V C   FGFG EI
Sbjct: 85  CDYEHWLIVMDKPGGEGANKQQMIDCYIQTLAKVLGSEEEAKRKIYNVSCERYFGFGCEI 144

Query: 300 DMGTVNKLKVLQDVLALLPDYSVSCKYKD 386
           D  T NKL+ L  VL +LPD  V  +YKD
Sbjct: 145 DEETSNKLEGLPGVLFVLPDSYVDPEYKD 173


>ref|XP_002285392.1| PREDICTED: DAG protein, chloroplastic [Vitis vinifera]
           gi|147779193|emb|CAN67991.1| hypothetical protein
           VITISV_023920 [Vitis vinifera]
          Length = 233

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
 Frame = +3

Query: 120 CKSDHWLVHLKDPECLFSNYTKCIRYCVRLLAEVVGSEDEAKEKIYVVWCAEPFGFGAEI 299
           C  +HWL+ +  P    +   + I   ++ LA+VVGSE+EAK+KIY V C   FGFG EI
Sbjct: 96  CDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEI 155

Query: 300 DMGTVNKLKVLQDVLALLPDYSVSCKYKD---------EVFCVAPPNRRKNHPSIYGCYD 452
           D  T NKL+ L  VL +LPD  V  +YKD         E+   +P  +R+  P+     D
Sbjct: 156 DEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPAPQRAQD 215

Query: 453 K 455
           +
Sbjct: 216 R 216


>ref|NP_001150208.1| DAG protein [Zea mays] gi|195637572|gb|ACG38254.1| DAG protein [Zea
           mays] gi|223947219|gb|ACN27693.1| unknown [Zea mays]
           gi|413953464|gb|AFW86113.1| DAG protein [Zea mays]
          Length = 223

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 41/89 (46%), Positives = 56/89 (62%)
 Frame = +3

Query: 120 CKSDHWLVHLKDPECLFSNYTKCIRYCVRLLAEVVGSEDEAKEKIYVVWCAEPFGFGAEI 299
           C  +HWL+ +  P    ++  + I   ++ LA+V+GSE+EAK+KIY V C   FGFG EI
Sbjct: 86  CDYEHWLIVMDKPGGEGASKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEI 145

Query: 300 DMGTVNKLKVLQDVLALLPDYSVSCKYKD 386
           D  T NKL+ L  VL +LPD  V  +YKD
Sbjct: 146 DEETSNKLEGLPGVLFVLPDSYVDAEYKD 174


>ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|222852411|gb|EEE89958.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 53/135 (39%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
 Frame = +3

Query: 18  SVQPVARFTAFNL-----DSIIYNDLYSYHFFRFEPNIE-------CKSDHWLVHLKDPE 161
           +  P ARFT+         +  Y+ L S   F   P  E       C  +HWL+ +  P 
Sbjct: 58  TTSPAARFTSIRCRVNRAGNSGYSPLNSGSNFSDRPPNEMAPLFPGCDYEHWLIVMDKPG 117

Query: 162 CLFSNYTKCIRYCVRLLAEVVGSEDEAKEKIYVVWCAEPFGFGAEIDMGTVNKLKVLQDV 341
              +   + I   +  LA+VVGSE+EAK KIY V C   FGFG EID  T NKL+ L  V
Sbjct: 118 GEGATKQQMIDCYIETLAKVVGSEEEAKTKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 177

Query: 342 LALLPDYSVSCKYKD 386
           L +LPD  V  +YKD
Sbjct: 178 LFVLPDSYVDPEYKD 192


>ref|XP_002315577.1| predicted protein [Populus trichocarpa] gi|222864617|gb|EEF01748.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
 Frame = +3

Query: 120 CKSDHWLVHLKDPECLFSNYTKCIRYCVRLLAEVVGSEDEAKEKIYVVWCAEPFGFGAEI 299
           C  +HWL+ +  P    +   + I   ++ L++VVGSE+EAK KIY V C   FGFG EI
Sbjct: 8   CDYEHWLIVMDKPGGEGATKQQMIDCYIQTLSKVVGSEEEAKNKIYNVSCERYFGFGCEI 67

Query: 300 DMGTVNKLKVLQDVLALLPDYSVSCKYKD---EVF-----CVAPPNRRK 422
           D  T NKL+ L  VL +LPD  V  +YKD   E+F        PP R+K
Sbjct: 68  DEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRPPERQK 116


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