BLASTX nr result
ID: Coptis25_contig00005228
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00005228
(300 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283141.2| PREDICTED: LRR receptor-like serine/threonin... 102 4e-20
ref|XP_002330078.1| predicted protein [Populus trichocarpa] gi|2... 90 2e-16
ref|XP_002517677.1| receptor-kinase, putative [Ricinus communis]... 89 3e-16
ref|XP_002262931.2| PREDICTED: probable LRR receptor-like serine... 88 6e-16
ref|XP_002332518.1| predicted protein [Populus trichocarpa] gi|2... 88 8e-16
>ref|XP_002283141.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO1-like [Vitis vinifera]
Length = 1464
Score = 102 bits (253), Expect = 4e-20
Identities = 49/99 (49%), Positives = 65/99 (65%)
Frame = +2
Query: 2 IEFLDLSQNYLSGPIPSCLNLTSLRYMHLQVNNLTGLMPKGLLKSPNLKTLDLKHNNLSG 181
+E LDLS N LSG +PSC + + L ++HLQ N+LTG + K +S +L TLD+++NNLSG
Sbjct: 1087 LELLDLSNNNLSGSLPSCFSPSLLIHVHLQENHLTGPLTKAFTRSMDLATLDIRNNNLSG 1146
Query: 182 SIPYWXXXXXXXXXXXXKGNHFSGSIPHEFCQLNKIAIL 298
IP W KGNHF G IP++ CQL+KI IL
Sbjct: 1147 GIPDWISMFSGLSILLLKGNHFQGKIPYQLCQLSKITIL 1185
Score = 61.6 bits (148), Expect = 6e-08
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 IEFLDLSQNYLSGPI-PSCLNLTSLRYMHLQVNNLTGLMPKGLLKSPNLKTLDLKHNNLS 178
+E+L LS+N L G + P NL SLR++ L N+ +G +P L S L+ L + HN++S
Sbjct: 992 LEYLILSKNDLHGQMFPRVSNLPSLRHLELDDNHFSGKIPD-LSNSSGLERLYVSHNSIS 1050
Query: 179 GSIPYWXXXXXXXXXXXXKGNHFSGSIPHEFCQLNKIAIL 298
G +P W N G IP EFC L+ + +L
Sbjct: 1051 GKLPGWIGNMSNLAALVMPNNSLEGPIPVEFCSLDALELL 1090
>ref|XP_002330078.1| predicted protein [Populus trichocarpa] gi|222871503|gb|EEF08634.1|
predicted protein [Populus trichocarpa]
Length = 1228
Score = 89.7 bits (221), Expect = 2e-16
Identities = 44/99 (44%), Positives = 58/99 (58%)
Frame = +2
Query: 2 IEFLDLSQNYLSGPIPSCLNLTSLRYMHLQVNNLTGLMPKGLLKSPNLKTLDLKHNNLSG 181
+EFLDLS+N LSG +P N LRY+HL N L+G +P +L TLDL NNL+G
Sbjct: 844 LEFLDLSENNLSGSLPLGFNALDLRYVHLYGNRLSGPLPFDFYNLSSLATLDLGDNNLTG 903
Query: 182 SIPYWXXXXXXXXXXXXKGNHFSGSIPHEFCQLNKIAIL 298
IP W K N F+G +PH+ C+L K++IL
Sbjct: 904 PIPNWIDSLSELSIFVLKSNQFNGKLPHQLCKLRKLSIL 942
>ref|XP_002517677.1| receptor-kinase, putative [Ricinus communis]
gi|223543309|gb|EEF44841.1| receptor-kinase, putative
[Ricinus communis]
Length = 2793
Score = 89.4 bits (220), Expect = 3e-16
Identities = 43/99 (43%), Positives = 58/99 (58%)
Frame = +2
Query: 2 IEFLDLSQNYLSGPIPSCLNLTSLRYMHLQVNNLTGLMPKGLLKSPNLKTLDLKHNNLSG 181
+E LDLS+N G +PSC N +SLRY+ LQ N L GL+P L +S NL +DL++N SG
Sbjct: 1534 VEILDLSENRFFGAMPSCFNASSLRYLFLQKNGLNGLIPHVLSRSSNLVVVDLRNNKFSG 1593
Query: 182 SIPYWXXXXXXXXXXXXKGNHFSGSIPHEFCQLNKIAIL 298
+IP W GN G IP++ CQL + I+
Sbjct: 1594 NIPSWISQLSELHVLLLGGNALGGHIPNQLCQLRNLKIM 1632
Score = 76.3 bits (186), Expect = 2e-12
Identities = 44/107 (41%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Frame = +2
Query: 5 EFLDLSQNYLSGPIPSCLNLTS------LRY---MHLQVNNLTGLMPKGLLKSPNLKTLD 157
E++DLSQN SG +PSC N+ S LRY ++LQ N TG +P L L TL+
Sbjct: 2396 EYIDLSQNRFSGSLPSCFNMQSDIHPYILRYPLHINLQGNRFTGSIPVSFLNFSKLLTLN 2455
Query: 158 LKHNNLSGSIPYWXXXXXXXXXXXXKGNHFSGSIPHEFCQLNKIAIL 298
L+ NN SGSIP+ GN +G IP C+LN++ IL
Sbjct: 2456 LRDNNFSGSIPHAFGAFPNLRALLLGGNRLNGLIPDWLCELNEVGIL 2502
Score = 54.7 bits (130), Expect = 8e-06
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Frame = +2
Query: 2 IEFLDLSQNYLSGPIPSCL-NLTSLRYMHLQVNNLTGLMPKGLLKS-PNLKTLDLKHNNL 175
+E LDLS N+L+G I S + +LTSL ++L N++ G P S NL+ LDL +
Sbjct: 1959 LEVLDLSYNWLNGSILSSVSSLTSLTTLNLSFNSMAGSFPSQEFASFKNLEVLDLSLSEF 2018
Query: 176 SGSIPYWXXXXXXXXXXXXKGNHFSGSIPHEFCQLNKI 289
+G++P GNHF+GS+ FC L ++
Sbjct: 2019 TGTVPQHSWAPLSLKVLSLFGNHFNGSLT-SFCGLKRL 2055
>ref|XP_002262931.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g36180-like [Vitis vinifera]
Length = 1231
Score = 88.2 bits (217), Expect = 6e-16
Identities = 44/99 (44%), Positives = 62/99 (62%)
Frame = +2
Query: 2 IEFLDLSQNYLSGPIPSCLNLTSLRYMHLQVNNLTGLMPKGLLKSPNLKTLDLKHNNLSG 181
+EFLD+SQN LSG +PS ++ L+++HLQ N TGL+P+ L S NL TLD++ N L G
Sbjct: 662 LEFLDVSQNTLSGSLPSLKSIEYLKHLHLQGNMFTGLIPRDFLNSSNLLTLDIRDNRLFG 721
Query: 182 SIPYWXXXXXXXXXXXXKGNHFSGSIPHEFCQLNKIAIL 298
SIP +GN SG IP++ C L KI+++
Sbjct: 722 SIPNSISRLLELRIFLLRGNLLSGFIPNQLCHLTKISLM 760
Score = 65.9 bits (159), Expect = 3e-09
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 IEFLDLSQNYLSGPIPSC-LNLTSLRYMHLQVNNLTGLMPKGLLKSPNLKTLDLKHNNLS 178
+EFL LS N G I S NLTSL ++HL N G + + +S L+ LD+ +NN+S
Sbjct: 566 LEFLKLSNNKFHGEIFSRDFNLTSLEFLHLDNNQFKGTLSNVISRSSWLRVLDVSNNNMS 625
Query: 179 GSIPYWXXXXXXXXXXXXKGNHFSGSIPHEFCQLNKIAIL 298
G IP W N F G +P E QL ++ L
Sbjct: 626 GEIPSWIGNMTDLTTLVLGNNSFKGKLPPEISQLQRLEFL 665
>ref|XP_002332518.1| predicted protein [Populus trichocarpa] gi|222832624|gb|EEE71101.1|
predicted protein [Populus trichocarpa]
Length = 760
Score = 87.8 bits (216), Expect = 8e-16
Identities = 41/99 (41%), Positives = 58/99 (58%)
Frame = +2
Query: 2 IEFLDLSQNYLSGPIPSCLNLTSLRYMHLQVNNLTGLMPKGLLKSPNLKTLDLKHNNLSG 181
+E+LDLS+N LSG IPSC N + ++HL N L+G + G S +L T+DL++N+ +G
Sbjct: 404 LEYLDLSENNLSGSIPSCFNPPQITHVHLSENRLSGPLTCGFYNSSSLITMDLRNNSFTG 463
Query: 182 SIPYWXXXXXXXXXXXXKGNHFSGSIPHEFCQLNKIAIL 298
SIP W + NHF G P C L K++IL
Sbjct: 464 SIPNWIGNLSSLSFLLLRANHFDGDFPDHLCLLEKLSIL 502