BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005227
         (1324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   120   5e-38
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    79   1e-22
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    72   2e-16
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]    90   1e-15
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-15

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  120 bits (302), Expect(2) = 5e-38
 Identities = 75/213 (35%), Positives = 112/213 (52%), Gaps = 4/213 (1%)
 Frame = -2

Query: 1113 LGLIAEHLNSIEDYIRFGTVCRSWQSVTVDQRRYNFSPKTLPWMMFPFYEKGEVDNNYSG 934
            L LIAE L+S+EDY+RFG VC+SW S+  D+     S K+ PW+M    E  E+   YS 
Sbjct: 930  LKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKS-PWLMLAEKENSEIRGFYS- 987

Query: 933  SHEFYSLSEGVHKLYLPEAINCSCSGSPYGWLIIRGNQ-RMEILNPLSRVSFLLPPISM- 760
                  LS  V+++ LPE +   C GSPYGWL+  G    M +LNPL+RV  LLP +   
Sbjct: 988  -----PLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQILLPSLRAC 1042

Query: 759  --LEDFVGSDPSYCTNSTHLVILPSSSSTVPLKELFVAFVLFREDGKLAFARPTDRAWTT 586
              L   + S  +  + S  + I  +  S+ P        +++ + G+LAF +P  + WT 
Sbjct: 1043 PNLNTLIDSS-TQGSRSKDIFIYKAVLSSAPSSPDCAVMIIYSDYGRLAFTKPGHQTWTL 1101

Query: 585  MKISNTSHKDILLFNNKFYIVDTEGMLWCFDIT 487
            ++  +    DI+ FN  F  V+    +W  DI+
Sbjct: 1102 LESESGPVDDIIYFNGSFLAVNLSWEVWICDIS 1134



 Score = 64.7 bits (156), Expect(2) = 5e-38
 Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
 Frame = -1

Query: 430  DIEDECRNLYLVELLGDLHMVVKFFSYEPEPVXXXXXXXXXXXGCYYFKVFKLDFGSKKW 251
            +IE E +  YLVE  G+++MV +        +             + F V KLD  +K+W
Sbjct: 1154 EIEYEAK--YLVESGGEIYMVTR-------NLYDTARRDIPYMRTWTFSVLKLDMCNKRW 1204

Query: 250  EEVHTLGDYALFVGLNTSFSILVSDHPEC-KGSVFFTDHDAEYLQ-PWGFYMGTFKLETK 77
            EEV  L   + F+G N SFS   SD+PE  K S++FTD    +L  P  F MG +  +  
Sbjct: 1205 EEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNIPRNFDMGIYNFQNT 1264

Query: 76   TLQLFYENGD-FCWNTCPVWIMPN 8
             ++ +    D     + P+WI P+
Sbjct: 1265 QIEHYPVGHDALSMFSAPLWIRPS 1288


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 79.0 bits (193), Expect(2) = 1e-22
 Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 22/233 (9%)
 Frame = -2

Query: 1119 EVLGLIAEHLNSIEDYIRFGTVCRSWQSVTVDQRRYNFSPKTLPWMMFPFYEKGEVDNNY 940
            E+L  IA+      DY+RF  VC +W++ +V +  ++  P  LPW+M P  +       +
Sbjct: 10   ELLDFIAKKFKIYTDYVRFRAVCHNWRA-SVPKTPHHL-PTQLPWLMLPQSQP------H 61

Query: 939  SGSHEFYSLS-EGVHKLYLPEAINCSCS-GSPYGWLIIRGNQ-RMEILNPLSRVSFLLPP 769
                 F+SLS    H L LPEA +     GS +GWL+I      + +LNPL+R    LPP
Sbjct: 62   HTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPP 121

Query: 768  ISMLEDFVGSDPSYCTNSTHLVILPSSSSTVPLKEL-------------------FVAFV 646
            +S   + V  + +       L        T  LK++                   F+A V
Sbjct: 122  LSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVV 181

Query: 645  LFREDGKLAFARPTDRAWTTMKISNTSHKDILLFNNKFYIVDTEGMLWCFDIT 487
            +  + G LA  R +D +WT ++ + +  +D++     FY V+  G +   D++
Sbjct: 182  ILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVS 234



 Score = 55.1 bits (131), Expect(2) = 1e-22
 Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
 Frame = -1

Query: 403 YLVELLGDLHMVVKFF--SYEPEPVXXXXXXXXXXXGCYYFKVFKLDFGSKKWEEVHTLG 230
           YLVE   +L +V ++   +Y+ EP                F+V +LD  + +WE V +LG
Sbjct: 255 YLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTR-----FQVCRLDLKAPRWEVVSSLG 309

Query: 229 DYALFVGLNTSFSILVSDHPECKGS-VFFTDHDAE--YLQPWGFY-MGTFKLETKTLQ-L 65
           D ALF+G N S S+   D P CKG+ +++TD  +E  Y    G   +G F LE  +++ L
Sbjct: 310 DRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPL 369

Query: 64  FYENGDFCWNTCPVWIMPN 8
              +    W   P+W+ PN
Sbjct: 370 PCSHFRIRWPP-PLWVTPN 387


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
            gi|223551310|gb|EEF52796.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score = 72.4 bits (176), Expect(2) = 2e-16
 Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 23/226 (10%)
 Frame = -2

Query: 1119 EVLGLIAEHLNSIEDYIRFGTVCRSWQSVTVDQRRYNFSPKTLPWMMFPFYEKGEVDN-N 943
            E+L  I +   +  DYI    VC+SW S  + ++ ++   + LPW++ P ++    DN N
Sbjct: 10   ELLQTITQKQTNYVDYISTRAVCKSWWSA-IPKKPHDLLCR-LPWLLLPHHK----DNPN 63

Query: 942  YSGSHEFYSLSEG-VHKLYLPEAINCSCSGSPYGWLI-IRGNQRMEILNPLSRVSFLLPP 769
            + G   FY+ S+G  + L LPE ++  C GS +GWL+ +     + +LNPL++    LP 
Sbjct: 64   HRG---FYNPSDGKTYHLELPETVDKRCCGSSHGWLVMVEDTPSIFLLNPLTKSRIELPS 120

Query: 768  ISMLEDFVGSDPSYCTNSTHLVILPSSSSTVPLKELFVAFVLFRED-------------- 631
            +S   +F  ++  Y  NS +L      ++ + ++E ++   +  ED              
Sbjct: 121  LSTFPNF-PTEVIY-QNSRNLNEYFIRNNKLRIRETYIRKAIVSEDPSVGSFMVMAIYKT 178

Query: 630  ----GKLAFARPTDRA-WTTMKISNTSH-KDILLFNNKFYIVDTEG 511
                  +AF +  D A +TT + S   H +D++    KFY+V+ +G
Sbjct: 179  INGSENIAFCKSGDAALFTTQETSQEIHYQDVMFHRGKFYMVNDKG 224



 Score = 40.8 bits (94), Expect(2) = 2e-16
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
 Frame = -1

Query: 403 YLVELLGDLHMVVKFFSYEPEPVXXXXXXXXXXXGCYYFKVFKLDFGSKKWEEVHTLGDY 224
           YL  L  DL +V +F +Y                  + F V+KLD  S  W ++  LGD 
Sbjct: 257 YLATLNEDLILVGRFRNYRVS---------GYEYQTHKFIVYKLDSSSSNWSKLDGLGDM 307

Query: 223 ALFVGLNTSFSILVSDHPECKGS-VFFTD 140
             F+G N   SI   +   C G+ ++FTD
Sbjct: 308 IFFLGWNCFDSISAHNCGNCSGNCIYFTD 336


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 67/214 (31%), Positives = 99/214 (46%), Gaps = 7/214 (3%)
 Frame = -2

Query: 1119 EVLGLIAEHLNSIEDYIRFGTVCRSWQSVTVDQRRYNFSP--KTLPWMMFPFYEKGEVDN 946
            E++ LI + L    D IRFGTVCR W  V ++ R+  F P     P ++ P        N
Sbjct: 12   ELIELIFDELQHAGDIIRFGTVCRFWGLVALEARQQVFKPLRPLSPMLLLP-------PN 64

Query: 945  NYSGSHEFYSL-SEGVHKLYLPEAINCSCSGSPYGWLI-IRGNQRMEI--LNPLSRVSFL 778
               G+H+ Y    +  +K+ +P   +  C  S  GWLI I      EI  LNP+S V   
Sbjct: 65   KDDGAHKLYDFFKKKAYKIQIPAMRDKWCCNSWNGWLITINHTFPYEICCLNPISGVQID 124

Query: 777  LPPISMLEDFVGS-DPSYCTNSTHLVILPSSSSTVPLKELFVAFVLFREDGKLAFARPTD 601
            LPP    ED     D +      + V+L S+ S  P     V   +     KLAF +P D
Sbjct: 125  LPPAITFEDSPPDLDETPIEFFLNKVVLSSTPS--PSNANCVIMAIHSNYNKLAFCKPGD 182

Query: 600  RAWTTMKISNTSHKDILLFNNKFYIVDTEGMLWC 499
            + W T+K  +  +KD+L + + FY +    ++ C
Sbjct: 183  KRWITLKSEDIQYKDLLYYKDNFYAIGRSKVVQC 216


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score = 87.8 bits (216), Expect = 6e-15
 Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 24/234 (10%)
 Frame = -2

Query: 1119 EVLGLIAEHLNSIEDYIRFGTVCRSWQSVTVDQRRYNFSPKTLPWMMFPFYEKGEVDNNY 940
            E++ +I++ +    DY+ F  VC +W+S     +  N  P  LPW++ P     +  +N 
Sbjct: 11   ELIEIISKKITIYSDYLHFQAVCHAWKSSI--PKTPNHLPPQLPWLLLP-----QSQSNQ 63

Query: 939  SGSHEFYSLSE-GVHKLYLPEAINCSCS-GSPYGWLIIRGNQ-RMEILNPLSRVSFLLPP 769
            S    F++LS    H L LPEA +     GS +GWLII  +   + ++NPL+R    LP 
Sbjct: 64   SSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIHLPA 123

Query: 768  ISMLEDFVGSDPSYCTNSTHLVILPSSSSTVPLKEL---------------------FVA 652
            IS   + V  D +       LV      +T  L+++                     FVA
Sbjct: 124  ISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGDFFVA 183

Query: 651  FVLFREDGKLAFARPTDRAWTTMKISNTSHKDILLFNNKFYIVDTEGMLWCFDI 490
              +    G LA+ +  D  W  ++ S +  +D++ FN  FY V+  G +   D+
Sbjct: 184  MAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDV 237