BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005219
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...    84   9e-15
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
gb|ABK92768.1| unknown [Populus trichocarpa]                           82   3e-14
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc...    75   6e-12
ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc...    75   6e-12

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
 Frame = +1

Query: 28  ISGFFFQTTMAFPCP---TPVKYVNINNDQAVVQDTILDFLPEKVEIVASSNGLLCCHRN 198
           ++GFFFQ    + C    + + Y+    +   VQ TI  FLPE V I+ S NGL+CC   
Sbjct: 49  LAGFFFQERYQW-CDEDISTISYIPATMEGTQVQQTIFSFLPEDVVILGSCNGLVCC--- 104

Query: 199 QELGERVDNLIYVCNPSKKEYVQI--EWPDGNDNHQYVALAFNPFRYPVDDLANFKVVSM 372
           + +    D  I+VCNPS K+++++    PD   ++    LAFNPF+ P+D   NFKVV +
Sbjct: 105 RSVFPSPDPSIFVCNPSNKQWIRLLETTPDKESSY---GLAFNPFQSPIDMPTNFKVVRV 161

Query: 373 SK-----EGMLTCLFHVYSSKSKEWRK 438
           S+     +      F +YSS++  W+K
Sbjct: 162 SQAQTDMDDDSYFSFEIYSSQAGAWKK 188


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
 Frame = +1

Query: 19  KAVISGFFFQTTMAFPCPTPVKYVN-INNDQAVVQDTILDFLPEKVEIVASSNGLLCCHR 195
           K  +SGFFFQ    + CP  +K +     ++  +Q  +  FLP+ V ++A  NGL+CC  
Sbjct: 51  KEPLSGFFFQQRHRY-CPDDIKTITYFPVERNRLQQDVFAFLPQDVVVLALCNGLVCCRS 109

Query: 196 NQELGERVDNLIYVCNPSKKEYVQIEWPDGNDNHQYVALAFNPFRYPVDDLANFKVVS-- 369
                   D  IYVCNP   E+ +++W +      ++ALAFNPF+    +L NFKVV   
Sbjct: 110 CYPF---EDPAIYVCNPLNSEWWKLDWKEPG-KESFIALAFNPFQDISVNLTNFKVVRPR 165

Query: 370 --MSKEGMLTCLFHVYSSKSKEWRKLDVYKFGYDNRISWPDGQVVFASGV 513
              +++      F +Y+S+++ W KL       DN +S  +G  +F+ G+
Sbjct: 166 QFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCDNSLSKNEG--IFSGGI 212


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
 Frame = +1

Query: 19  KAVISGFFFQTTMAFPCPTPVKYVN-INNDQAVVQDTILDFLPEKVEIVASSNGLLCCHR 195
           K  +SGFFFQ    + CP  +K +     ++  +Q  +  FLP+ V ++A  NGL+CC  
Sbjct: 51  KEPLSGFFFQQRHRY-CPDDIKTITYFPVERNRLQQDVFAFLPQDVVVLALCNGLVCCRS 109

Query: 196 NQELGERVDNLIYVCNPSKKEYVQIEWPDGNDNHQYVALAFNPFRYPVDDLANFKVVS-- 369
                   D  IYVCNP   E+ +++W +      ++ALAFNPF+    +L NFKVV   
Sbjct: 110 CYPF---EDPAIYVCNPLNSEWWKLDWKEPG-KESFIALAFNPFQDISVNLTNFKVVRPR 165

Query: 370 --MSKEGMLTCLFHVYSSKSKEWRKLDVYKFGYDNRISWPDGQVVFASGV 513
              +++      F +Y+S+++ W KL       DN +S  +G  +F+ G+
Sbjct: 166 QFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCDNSLSKNEG--IFSGGI 212


>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 399

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
 Frame = +1

Query: 4   QCHRVKAVISGFFFQTTMAFPCPTPVK---YVNINNDQAVVQDTILDFLPEKVEIVASSN 174
           Q  +    +SGF FQ      CP  +    Y+ I+ D  V Q  +  FLPE V I+ S N
Sbjct: 43  QFQKCGLALSGFMFQEKYR-KCPIDISTFTYMPIDADSKV-QKMVFGFLPEDVVILQSCN 100

Query: 175 GLLCCHR--NQELGERVDNLIYVCNPSKKEYVQIEWPDGNDNHQYVALAFNPFRYPVDDL 348
           GL+CC      +        IYVCNP  K++V  E     D+   +ALAF+P   PV+  
Sbjct: 101 GLVCCRSCFRTQHSTTHSTTIYVCNPLFKKWVSFEVAQ-LDSFSSIALAFDPILDPVNTA 159

Query: 349 ANFKVVSM----SKEGMLTCLFHVYSSKSKEWRKLDVYKFGYDNRISWPDGQVVFASG 510
            NFKVV +    +++  +   F +YSS++  W++         + + + DG ++  +G
Sbjct: 160 TNFKVVRIQQLENEQEEMYYTFEIYSSETGTWKE--------SSEVCYSDGNLLKNNG 209


>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 398

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
 Frame = +1

Query: 4   QCHRVKAVISGFFFQTTMAFPCPTPVK---YVNINNDQAVVQDTILDFLPEKVEIVASSN 174
           Q  +    +SGF FQ      CP  +    Y+ I+ D  V Q  +  FLPE V I+ S N
Sbjct: 43  QFQKCGLALSGFMFQEKYR-KCPIDISTFTYMPIDADSKV-QKMVFGFLPEDVVILQSCN 100

Query: 175 GLLCCHR--NQELGERVDNLIYVCNPSKKEYVQIEWPDGNDNHQYVALAFNPFRYPVDDL 348
           GL+CC      +        IYVCNP  K++V  E     D+   +ALAF+P   PV+  
Sbjct: 101 GLVCCRSCFRTQHSTTHSTTIYVCNPLFKKWVSFEVAQ-LDSFSSIALAFDPILDPVNTA 159

Query: 349 ANFKVVSM----SKEGMLTCLFHVYSSKSKEWRKLDVYKFGYDNRISWPDGQVVFASG 510
            NFKVV +    +++  +   F +YSS++  W++         + + + DG ++  +G
Sbjct: 160 TNFKVVRIQQLENEQEEMYYTFEIYSSETGTWKE--------SSEVCYSDGNLLNNNG 209