BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005209
         (1614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519520.1| isocitrate dehydrogenase, putative [Ricinus ...   531   e-164
ref|XP_002281826.1| PREDICTED: isocitrate dehydrogenase [NAD] ca...   518   e-161
emb|CBI32749.3| unnamed protein product [Vitis vinifera]              518   e-161
ref|NP_568113.1| Isocitrate dehydrogenase [NAD] catalytic subuni...   519   e-160
emb|CAB83285.1| 3-isopropylmalate dehydrogenase-like protein [Ar...   519   e-160

>ref|XP_002519520.1| isocitrate dehydrogenase, putative [Ricinus communis]
            gi|223541383|gb|EEF42934.1| isocitrate dehydrogenase,
            putative [Ricinus communis]
          Length = 364

 Score =  531 bits (1368), Expect(2) = e-164
 Identities = 260/308 (84%), Positives = 282/308 (91%)
 Frame = -2

Query: 1517 MASQILRRVLGNQSTGNXXXXSLILRNYLCSMSPIQATMFPGDGIGPEIAESVKKVLNTA 1338
            MASQ+LRR  G++S+      +   R    + +PI AT+FPGDGIGPEIAESVK+V   A
Sbjct: 1    MASQLLRRAFGSRSSSQIGAAAAA-RALFSTSTPITATLFPGDGIGPEIAESVKQVFKEA 59

Query: 1337 QVPIQWEEHFVGDKVDPRTQSFLTWESLESVRTNRVGLKGPMATPIGKGHRSLNLTLRKE 1158
            +VPI+WEEH+VGD++DPRTQSFLTWESLESVR NRVGLKGPMATPIGKGHRSLNLTLRKE
Sbjct: 60   EVPIEWEEHYVGDQIDPRTQSFLTWESLESVRRNRVGLKGPMATPIGKGHRSLNLTLRKE 119

Query: 1157 LGLYANVRPCYSLSGFKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVVESLKIITRTASL 978
            L LYANVRPCYSL G+KTRYDDVNL+TIRENTEGEYSGLEHQVVRGVVESLKIITR ASL
Sbjct: 120  LNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASL 179

Query: 977  RVAEYAFHYARTEGREKVSAIHKANIMRKTDGLFLTCCREVAEKYPDIKYEEVIIDNCCM 798
            RVAEYAFHYA+T GRE+VSAIHKANIM+KTDGLFL CCREVAEKYP+IKYEEV+IDNCCM
Sbjct: 180  RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIKYEEVVIDNCCM 239

Query: 797  MLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEGGIALAEAVHGSAPDIA 618
            MLVKNPALFDVLVMPNLYGDIISDLCAGL+GGLGLTPSCNIGEGGIALAEAVHGSAPDIA
Sbjct: 240  MLVKNPALFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIA 299

Query: 617  GKNLANPT 594
            GKNLANPT
Sbjct: 300  GKNLANPT 307



 Score = 74.3 bits (181), Expect(2) = e-164
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = -1

Query: 483 LKLHDKAEQIHNAITKTIAEGKYRTADLGGTSTTTDFTKAICDNL 349
           L+LHDKA++I +AI  TI+EGKYRTADLGG+S+TTDFTKAICD+L
Sbjct: 320 LELHDKADRIQSAILDTISEGKYRTADLGGSSSTTDFTKAICDHL 364


>ref|XP_002281826.1| PREDICTED: isocitrate dehydrogenase [NAD] catalytic subunit 5,
            mitochondrial-like [Vitis vinifera]
          Length = 367

 Score =  518 bits (1334), Expect(2) = e-161
 Identities = 256/312 (82%), Positives = 282/312 (90%), Gaps = 3/312 (0%)
 Frame = -2

Query: 1520 IMASQILRRVLGNQSTGNXXXXSLILRNYLCSMSP---IQATMFPGDGIGPEIAESVKKV 1350
            +M +QILRR+LG+ ++          R++  S S    I+AT+FPGDGIGPEIAE+VK+V
Sbjct: 1    MMGTQILRRLLGSPNSSRAFSS--FNRSFSSSDSSSNLIRATLFPGDGIGPEIAEAVKQV 58

Query: 1349 LNTAQVPIQWEEHFVGDKVDPRTQSFLTWESLESVRTNRVGLKGPMATPIGKGHRSLNLT 1170
               A VPI+WEEH+VGD++DPRTQSFLTWESLESVR N VGLKGPMATPIGKGHRSLNLT
Sbjct: 59   FRAADVPIEWEEHYVGDQIDPRTQSFLTWESLESVRQNGVGLKGPMATPIGKGHRSLNLT 118

Query: 1169 LRKELGLYANVRPCYSLSGFKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVVESLKIITR 990
            LRKEL LYANVRPCYSL G+KTRYDDV+L+TIRENTEGEYSGLEHQVVRGVVESLKIITR
Sbjct: 119  LRKELNLYANVRPCYSLPGYKTRYDDVDLITIRENTEGEYSGLEHQVVRGVVESLKIITR 178

Query: 989  TASLRVAEYAFHYARTEGREKVSAIHKANIMRKTDGLFLTCCREVAEKYPDIKYEEVIID 810
             ASLRVAEYAFHYA+T GRE+VSAIHKANIM+KTDGLFL CCREVAEKYP+IKYEEV+ID
Sbjct: 179  QASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIKYEEVVID 238

Query: 809  NCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEGGIALAEAVHGSA 630
            NCCMMLVKNPALFDVLVMPNLYGDIISDLCAGL+GGLGLTPSCNIGEGGIALAEAVHGSA
Sbjct: 239  NCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSA 298

Query: 629  PDIAGKNLANPT 594
            PDIAGKN+ANPT
Sbjct: 299  PDIAGKNMANPT 310



 Score = 80.1 bits (196), Expect(2) = e-161
 Identities = 37/45 (82%), Positives = 42/45 (93%)
 Frame = -1

Query: 483 LKLHDKAEQIHNAITKTIAEGKYRTADLGGTSTTTDFTKAICDNL 349
           LKLHDKA+QI NAI  TI+EG+YRTADLGG+STTTDFTKAICD+L
Sbjct: 323 LKLHDKADQIQNAILNTISEGRYRTADLGGSSTTTDFTKAICDHL 367


>emb|CBI32749.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score =  518 bits (1333), Expect(2) = e-161
 Identities = 256/311 (82%), Positives = 281/311 (90%), Gaps = 3/311 (0%)
 Frame = -2

Query: 1517 MASQILRRVLGNQSTGNXXXXSLILRNYLCSMSP---IQATMFPGDGIGPEIAESVKKVL 1347
            M +QILRR+LG+ ++          R++  S S    I+AT+FPGDGIGPEIAE+VK+V 
Sbjct: 1    MGTQILRRLLGSPNSSRAFSS--FNRSFSSSDSSSNLIRATLFPGDGIGPEIAEAVKQVF 58

Query: 1346 NTAQVPIQWEEHFVGDKVDPRTQSFLTWESLESVRTNRVGLKGPMATPIGKGHRSLNLTL 1167
              A VPI+WEEH+VGD++DPRTQSFLTWESLESVR N VGLKGPMATPIGKGHRSLNLTL
Sbjct: 59   RAADVPIEWEEHYVGDQIDPRTQSFLTWESLESVRQNGVGLKGPMATPIGKGHRSLNLTL 118

Query: 1166 RKELGLYANVRPCYSLSGFKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVVESLKIITRT 987
            RKEL LYANVRPCYSL G+KTRYDDV+L+TIRENTEGEYSGLEHQVVRGVVESLKIITR 
Sbjct: 119  RKELNLYANVRPCYSLPGYKTRYDDVDLITIRENTEGEYSGLEHQVVRGVVESLKIITRQ 178

Query: 986  ASLRVAEYAFHYARTEGREKVSAIHKANIMRKTDGLFLTCCREVAEKYPDIKYEEVIIDN 807
            ASLRVAEYAFHYA+T GRE+VSAIHKANIM+KTDGLFL CCREVAEKYP+IKYEEV+IDN
Sbjct: 179  ASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIKYEEVVIDN 238

Query: 806  CCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEGGIALAEAVHGSAP 627
            CCMMLVKNPALFDVLVMPNLYGDIISDLCAGL+GGLGLTPSCNIGEGGIALAEAVHGSAP
Sbjct: 239  CCMMLVKNPALFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAP 298

Query: 626  DIAGKNLANPT 594
            DIAGKN+ANPT
Sbjct: 299  DIAGKNMANPT 309



 Score = 80.1 bits (196), Expect(2) = e-161
 Identities = 37/45 (82%), Positives = 42/45 (93%)
 Frame = -1

Query: 483 LKLHDKAEQIHNAITKTIAEGKYRTADLGGTSTTTDFTKAICDNL 349
           LKLHDKA+QI NAI  TI+EG+YRTADLGG+STTTDFTKAICD+L
Sbjct: 322 LKLHDKADQIQNAILNTISEGRYRTADLGGSSTTTDFTKAICDHL 366


>ref|NP_568113.1| Isocitrate dehydrogenase [NAD] catalytic subunit 5 [Arabidopsis
            thaliana] gi|75249591|sp|Q945K7.1|IDH5_ARATH RecName:
            Full=Isocitrate dehydrogenase [NAD] catalytic subunit 5,
            mitochondrial; AltName: Full=IDH-V; AltName:
            Full=Isocitric dehydrogenase 5; AltName:
            Full=NAD(+)-specific ICDH 5; Flags: Precursor
            gi|15724320|gb|AAL06553.1|AF412100_1 W25EPL23M/W25EPL23M
            [Arabidopsis thaliana] gi|20466714|gb|AAM20674.1|
            putative protein [Arabidopsis thaliana]
            gi|30725594|gb|AAP37819.1| At5g03290 [Arabidopsis
            thaliana] gi|332003198|gb|AED90581.1| Isocitrate
            dehydrogenase [NAD] catalytic subunit 5 [Arabidopsis
            thaliana]
          Length = 374

 Score =  519 bits (1337), Expect(2) = e-160
 Identities = 257/315 (81%), Positives = 281/315 (89%), Gaps = 7/315 (2%)
 Frame = -2

Query: 1517 MASQILRRVLGNQST-------GNXXXXSLILRNYLCSMSPIQATMFPGDGIGPEIAESV 1359
            MA+ + RR++GN+ST        +    S + R +  S +PI AT+FPGDGIGPEIAESV
Sbjct: 3    MAANLARRLIGNRSTQILGAVNSSSGAASSVARAFCSSTTPITATLFPGDGIGPEIAESV 62

Query: 1358 KKVLNTAQVPIQWEEHFVGDKVDPRTQSFLTWESLESVRTNRVGLKGPMATPIGKGHRSL 1179
            KKV  TA VPI+WEEH+VG ++DPRTQSFLTWESLESVR N+VGLKGPMATPIGKGHRSL
Sbjct: 63   KKVFTTAGVPIEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSL 122

Query: 1178 NLTLRKELGLYANVRPCYSLSGFKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVVESLKI 999
            NLTLRKEL LYANVRPCYSL G+KTRYDDV+L+TIRENTEGEYSGLEHQVVRGVVESLKI
Sbjct: 123  NLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIRENTEGEYSGLEHQVVRGVVESLKI 182

Query: 998  ITRTASLRVAEYAFHYARTEGREKVSAIHKANIMRKTDGLFLTCCREVAEKYPDIKYEEV 819
            ITR ASLRVAEYAF YA+T GRE+VSAIHKANIM+KTDGLFL CCREVAEKYP+I YEEV
Sbjct: 183  ITRQASLRVAEYAFLYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEV 242

Query: 818  IIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEGGIALAEAVH 639
            +IDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGE G+ALAEAVH
Sbjct: 243  VIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEDGVALAEAVH 302

Query: 638  GSAPDIAGKNLANPT 594
            GSAPDIAGKNLANPT
Sbjct: 303  GSAPDIAGKNLANPT 317



 Score = 75.9 bits (185), Expect(2) = e-160
 Identities = 35/45 (77%), Positives = 42/45 (93%)
 Frame = -1

Query: 483 LKLHDKAEQIHNAITKTIAEGKYRTADLGGTSTTTDFTKAICDNL 349
           LK +++AEQIH+AI  TIAEGKYRTADLGG+STTT+FTKAICD+L
Sbjct: 330 LKFNEQAEQIHSAIINTIAEGKYRTADLGGSSTTTEFTKAICDHL 374


>emb|CAB83285.1| 3-isopropylmalate dehydrogenase-like protein [Arabidopsis thaliana]
            gi|9757780|dbj|BAB08389.1| 3-isopropylmalate
            dehydrogenase [Arabidopsis thaliana]
          Length = 372

 Score =  519 bits (1337), Expect(2) = e-160
 Identities = 257/315 (81%), Positives = 281/315 (89%), Gaps = 7/315 (2%)
 Frame = -2

Query: 1517 MASQILRRVLGNQST-------GNXXXXSLILRNYLCSMSPIQATMFPGDGIGPEIAESV 1359
            MA+ + RR++GN+ST        +    S + R +  S +PI AT+FPGDGIGPEIAESV
Sbjct: 1    MAANLARRLIGNRSTQILGAVNSSSGAASSVARAFCSSTTPITATLFPGDGIGPEIAESV 60

Query: 1358 KKVLNTAQVPIQWEEHFVGDKVDPRTQSFLTWESLESVRTNRVGLKGPMATPIGKGHRSL 1179
            KKV  TA VPI+WEEH+VG ++DPRTQSFLTWESLESVR N+VGLKGPMATPIGKGHRSL
Sbjct: 61   KKVFTTAGVPIEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSL 120

Query: 1178 NLTLRKELGLYANVRPCYSLSGFKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVVESLKI 999
            NLTLRKEL LYANVRPCYSL G+KTRYDDV+L+TIRENTEGEYSGLEHQVVRGVVESLKI
Sbjct: 121  NLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIRENTEGEYSGLEHQVVRGVVESLKI 180

Query: 998  ITRTASLRVAEYAFHYARTEGREKVSAIHKANIMRKTDGLFLTCCREVAEKYPDIKYEEV 819
            ITR ASLRVAEYAF YA+T GRE+VSAIHKANIM+KTDGLFL CCREVAEKYP+I YEEV
Sbjct: 181  ITRQASLRVAEYAFLYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEV 240

Query: 818  IIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEGGIALAEAVH 639
            +IDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGE G+ALAEAVH
Sbjct: 241  VIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEDGVALAEAVH 300

Query: 638  GSAPDIAGKNLANPT 594
            GSAPDIAGKNLANPT
Sbjct: 301  GSAPDIAGKNLANPT 315



 Score = 75.9 bits (185), Expect(2) = e-160
 Identities = 35/45 (77%), Positives = 42/45 (93%)
 Frame = -1

Query: 483 LKLHDKAEQIHNAITKTIAEGKYRTADLGGTSTTTDFTKAICDNL 349
           LK +++AEQIH+AI  TIAEGKYRTADLGG+STTT+FTKAICD+L
Sbjct: 328 LKFNEQAEQIHSAIINTIAEGKYRTADLGGSSTTTEFTKAICDHL 372