BLASTX nr result
ID: Coptis25_contig00005207
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00005207
(596 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003591273.1| Bifunctional aminoacyl-tRNA synthetase [Medi... 204 1e-68
ref|XP_003536004.1| PREDICTED: probable glutamyl-tRNA synthetase... 201 7e-68
ref|XP_002278667.2| PREDICTED: probable glutamyl-tRNA synthetase... 204 6e-67
emb|CBI39688.3| unnamed protein product [Vitis vinifera] 204 6e-67
emb|CAN76587.1| hypothetical protein VITISV_020288 [Vitis vinifera] 201 3e-66
>ref|XP_003591273.1| Bifunctional aminoacyl-tRNA synthetase [Medicago truncatula]
gi|355480321|gb|AES61524.1| Bifunctional aminoacyl-tRNA
synthetase [Medicago truncatula]
Length = 735
Score = 204 bits (518), Expect(2) = 1e-68
Identities = 96/124 (77%), Positives = 110/124 (88%)
Frame = -2
Query: 595 KRVLLTLVDGPEKPFVRIIPRHKKFEGAGSKATTYTRRIWLDYADASAISVGEEITLMDW 416
+RVLLTL DGPEK FVRIIPRHKK+E AG+KATTYT+RIW+DYADA ++S GEE+TLMDW
Sbjct: 543 RRVLLTLTDGPEKSFVRIIPRHKKYEAAGNKATTYTKRIWIDYADAESVSAGEEVTLMDW 602
Query: 415 GNAVINEIGKDNDGTVTQLTGVLNLEGSVKTTKWKLTWLPETDELVKLLLVDFDYLITKK 236
GNAV+ E+ KD DG VT L+GVL+LEGSVKTTK KLTWLPE DELV L L++FDYLITKK
Sbjct: 603 GNAVVKEVEKDQDGNVTGLSGVLHLEGSVKTTKLKLTWLPELDELVSLTLMEFDYLITKK 662
Query: 235 KLEE 224
KLEE
Sbjct: 663 KLEE 666
Score = 81.6 bits (200), Expect(2) = 1e-68
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = -1
Query: 140 LEEGEDFLDVLNPNTKKETHALGDSNMRNLQRGEILQLERKGYFIC 3
LEEGEDF DVLNP TKKET A GDSNMRNL+RGE+LQLERKGYF C
Sbjct: 664 LEEGEDFTDVLNPCTKKETLAYGDSNMRNLKRGEVLQLERKGYFRC 709
>ref|XP_003536004.1| PREDICTED: probable glutamyl-tRNA synthetase, cytoplasmic-like
[Glycine max]
Length = 733
Score = 201 bits (512), Expect(2) = 7e-68
Identities = 96/124 (77%), Positives = 108/124 (87%)
Frame = -2
Query: 595 KRVLLTLVDGPEKPFVRIIPRHKKFEGAGSKATTYTRRIWLDYADASAISVGEEITLMDW 416
+RVLLTL DGPEKPFVRIIPRHKK+E AG KATTYT+RIWLD ADA ++S GEE+TLMDW
Sbjct: 541 RRVLLTLTDGPEKPFVRIIPRHKKYEAAGDKATTYTKRIWLDLADAVSLSAGEEVTLMDW 600
Query: 415 GNAVINEIGKDNDGTVTQLTGVLNLEGSVKTTKWKLTWLPETDELVKLLLVDFDYLITKK 236
GNA++ EI KD DG + L+GVL+LEGSVKTTK KLTWLPE DELV L LV+FDYLITKK
Sbjct: 601 GNAIVKEIEKDQDGNIIGLSGVLHLEGSVKTTKLKLTWLPEIDELVSLTLVEFDYLITKK 660
Query: 235 KLEE 224
KLEE
Sbjct: 661 KLEE 664
Score = 81.6 bits (200), Expect(2) = 7e-68
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = -1
Query: 140 LEEGEDFLDVLNPNTKKETHALGDSNMRNLQRGEILQLERKGYFIC 3
LEEGEDF+DV+NP TKKET A GDSNMRNLQRG++LQLERKGYF C
Sbjct: 662 LEEGEDFIDVVNPCTKKETLAYGDSNMRNLQRGDLLQLERKGYFRC 707
>ref|XP_002278667.2| PREDICTED: probable glutamyl-tRNA synthetase, cytoplasmic-like
isoform 1 [Vitis vinifera]
Length = 736
Score = 204 bits (518), Expect(2) = 6e-67
Identities = 98/124 (79%), Positives = 108/124 (87%)
Frame = -2
Query: 595 KRVLLTLVDGPEKPFVRIIPRHKKFEGAGSKATTYTRRIWLDYADASAISVGEEITLMDW 416
KRVL+TL DGPEKPFVRIIPRHKKFEGAG K TTYT+RIW+DYADA +IS EEITLMDW
Sbjct: 547 KRVLVTLADGPEKPFVRIIPRHKKFEGAGEKCTTYTKRIWIDYADAVSISENEEITLMDW 606
Query: 415 GNAVINEIGKDNDGTVTQLTGVLNLEGSVKTTKWKLTWLPETDELVKLLLVDFDYLITKK 236
GNA+I EI KD DG +TQL GVL+LEGSVK TK KLTWLPET ELV L L++FDYLITKK
Sbjct: 607 GNAIIKEIRKDQDGNITQLIGVLHLEGSVKATKLKLTWLPETSELVNLSLMEFDYLITKK 666
Query: 235 KLEE 224
KL+E
Sbjct: 667 KLDE 670
Score = 76.3 bits (186), Expect(2) = 6e-67
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = -1
Query: 140 LEEGEDFLDVLNPNTKKETHALGDSNMRNLQRGEILQLERKGYFIC 3
L+EG+DFLD LNP TK+ET A+GDSN+RNL+RGEI+QLERKGY+ C
Sbjct: 668 LDEGDDFLDALNPCTKRETAAVGDSNIRNLKRGEIVQLERKGYYRC 713
>emb|CBI39688.3| unnamed protein product [Vitis vinifera]
Length = 276
Score = 204 bits (518), Expect(2) = 6e-67
Identities = 98/124 (79%), Positives = 108/124 (87%)
Frame = -2
Query: 595 KRVLLTLVDGPEKPFVRIIPRHKKFEGAGSKATTYTRRIWLDYADASAISVGEEITLMDW 416
KRVL+TL DGPEKPFVRIIPRHKKFEGAG K TTYT+RIW+DYADA +IS EEITLMDW
Sbjct: 87 KRVLVTLADGPEKPFVRIIPRHKKFEGAGEKCTTYTKRIWIDYADAVSISENEEITLMDW 146
Query: 415 GNAVINEIGKDNDGTVTQLTGVLNLEGSVKTTKWKLTWLPETDELVKLLLVDFDYLITKK 236
GNA+I EI KD DG +TQL GVL+LEGSVK TK KLTWLPET ELV L L++FDYLITKK
Sbjct: 147 GNAIIKEIRKDQDGNITQLIGVLHLEGSVKATKLKLTWLPETSELVNLSLMEFDYLITKK 206
Query: 235 KLEE 224
KL+E
Sbjct: 207 KLDE 210
Score = 76.3 bits (186), Expect(2) = 6e-67
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = -1
Query: 140 LEEGEDFLDVLNPNTKKETHALGDSNMRNLQRGEILQLERKGYFIC 3
L+EG+DFLD LNP TK+ET A+GDSN+RNL+RGEI+QLERKGY+ C
Sbjct: 208 LDEGDDFLDALNPCTKRETAAVGDSNIRNLKRGEIVQLERKGYYRC 253
>emb|CAN76587.1| hypothetical protein VITISV_020288 [Vitis vinifera]
Length = 736
Score = 201 bits (512), Expect(2) = 3e-66
Identities = 97/124 (78%), Positives = 107/124 (86%)
Frame = -2
Query: 595 KRVLLTLVDGPEKPFVRIIPRHKKFEGAGSKATTYTRRIWLDYADASAISVGEEITLMDW 416
KRVL+TL DGPEKPFVRIIPRHKKFEGAG K TTYT+RIW+DYADA +IS EEITLMDW
Sbjct: 547 KRVLVTLADGPEKPFVRIIPRHKKFEGAGEKCTTYTKRIWIDYADAVSISENEEITLMDW 606
Query: 415 GNAVINEIGKDNDGTVTQLTGVLNLEGSVKTTKWKLTWLPETDELVKLLLVDFDYLITKK 236
GNA+I EI KD DG + QL GVL+LEGSVK TK KLTWLPET ELV L L++FDYLITKK
Sbjct: 607 GNAIIKEIRKDQDGNIMQLIGVLHLEGSVKATKLKLTWLPETSELVNLSLMEFDYLITKK 666
Query: 235 KLEE 224
KL+E
Sbjct: 667 KLDE 670
Score = 76.3 bits (186), Expect(2) = 3e-66
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = -1
Query: 140 LEEGEDFLDVLNPNTKKETHALGDSNMRNLQRGEILQLERKGYFIC 3
L+EG+DFLD LNP TK+ET A+GDSN+RNL+RGEI+QLERKGY+ C
Sbjct: 668 LDEGDDFLDALNPCTKRETAAVGDSNIRNLKRGEIVQLERKGYYRC 713