BLASTX nr result

ID: Coptis25_contig00005200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005200
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACM45716.1| class IV chitinase [Pyrus pyrifolia]                   414   e-113
ref|XP_002274758.1| PREDICTED: endochitinase PR4 [Vitis vinifera]     407   e-111
ref|XP_002274537.1| PREDICTED: endochitinase PR4 [Vitis vinifera]     402   e-110
emb|CAN79254.1| hypothetical protein VITISV_009137 [Vitis vinifera]   400   e-109
ref|XP_002326040.1| predicted protein [Populus trichocarpa] gi|2...   395   e-108

>gb|ACM45716.1| class IV chitinase [Pyrus pyrifolia]
          Length = 272

 Score =  414 bits (1065), Expect = e-113
 Identities = 190/249 (76%), Positives = 210/249 (84%), Gaps = 4/249 (1%)
 Frame = +1

Query: 79  NCGCAPNFCCSQYGYCGTDPDYCGPGCREGPCNAP---PSTNDVTVADIVTPEFFNGIIN 249
           NCGCA + CCSQYGYCGTD  YCG GC+ GPC  P   PSTNDV VADIVTPEFFNGII+
Sbjct: 26  NCGCAADLCCSQYGYCGTDDAYCGKGCQSGPCKTPAQTPSTNDVVVADIVTPEFFNGIID 85

Query: 250 QAGADCAGKNFYSRDRFLEALNSYPQFGRVGTQDDSKREIAAFFAHVTHETGHFCYIEEI 429
           QA A CAGKNFYSR  FLEALNSY QFGR+G+ DDSKREIAAFFAHVTHETGHFCYIEEI
Sbjct: 86  QADASCAGKNFYSRATFLEALNSYNQFGRIGSVDDSKREIAAFFAHVTHETGHFCYIEEI 145

Query: 430 DGASKDYCDETNSQYPCVANKGYYGRGPLQLSWNYNYGPAGNSIVFDGLSAPETVATDPL 609
           DGASKDYCDE N+QYPC  NKGYYGRGP+QLSWN+NYGPAG SI FDGL++PETVA DP+
Sbjct: 146 DGASKDYCDENNTQYPCNPNKGYYGRGPIQLSWNFNYGPAGESIGFDGLNSPETVANDPV 205

Query: 610 VSFKTALWFWMNNAHSIITSGQGFGPTVRAINGG-ECDGRNPDTVRSRAEYYTNYSSQLG 786
           ++FKTALW+WMNN   +I  G+GFG T+RAING  ECDG NP TV+ R EYYT Y +QLG
Sbjct: 206 IAFKTALWYWMNNVRPVI--GEGFGATIRAINGALECDGGNPATVQKRVEYYTEYCNQLG 263

Query: 787 VSAGDNLTC 813
           V+ GDNLTC
Sbjct: 264 VAPGDNLTC 272


>ref|XP_002274758.1| PREDICTED: endochitinase PR4 [Vitis vinifera]
          Length = 274

 Score =  407 bits (1046), Expect = e-111
 Identities = 184/246 (74%), Positives = 213/246 (86%), Gaps = 1/246 (0%)
 Frame = +1

Query: 79  NCGCAPNFCCSQYGYCGTDPDYCGPGCREGPCNAPPSTNDVTVADIVTPEFFNGIINQAG 258
           +CGCA + CCS++GYCGT  DYCG GC+EGPCN PPSTN+V+VADIVT EFFNGII+QA 
Sbjct: 31  DCGCAADLCCSRWGYCGTGDDYCGTGCQEGPCNPPPSTNNVSVADIVTQEFFNGIIDQAD 90

Query: 259 ADCAGKNFYSRDRFLEALNSYPQFGRVGTQDDSKREIAAFFAHVTHETGHFCYIEEIDGA 438
           A C GKNFYSR RFLEALNS+ QFGRVG+++DSKREIAAFFAHVTHETGHFCYIEEI+G+
Sbjct: 91  ASCEGKNFYSRARFLEALNSFSQFGRVGSEEDSKREIAAFFAHVTHETGHFCYIEEINGS 150

Query: 439 SKDYCDETNSQYPCVANKGYYGRGPLQLSWNYNYGPAGNSIVFDGLSAPETVATDPLVSF 618
           S+DYCDETN+QYPCVA KGYYGRGP+QLSWNYNYGPAG  I FDGL++PETVA+DP+VSF
Sbjct: 151 SRDYCDETNTQYPCVAGKGYYGRGPIQLSWNYNYGPAGEDIGFDGLNSPETVASDPVVSF 210

Query: 619 KTALWFWMNNAHSIITSGQGFGPTVRAINGG-ECDGRNPDTVRSRAEYYTNYSSQLGVSA 795
           KTALW+W+N    +I  GQGFG T+RAI+G  ECDG N  TV +R EYYT Y +QLGV+ 
Sbjct: 211 KTALWYWVNFVQPVI--GQGFGATIRAISGALECDGANQATVNARVEYYTEYCNQLGVTP 268

Query: 796 GDNLTC 813
           GDNLTC
Sbjct: 269 GDNLTC 274


>ref|XP_002274537.1| PREDICTED: endochitinase PR4 [Vitis vinifera]
          Length = 274

 Score =  402 bits (1033), Expect = e-110
 Identities = 182/246 (73%), Positives = 212/246 (86%), Gaps = 1/246 (0%)
 Frame = +1

Query: 79  NCGCAPNFCCSQYGYCGTDPDYCGPGCREGPCNAPPSTNDVTVADIVTPEFFNGIINQAG 258
           +CGCA + CCS++GYCGT  DYCG GC+EGPCN  PSTN+V+VADIVT +FFNGII+QA 
Sbjct: 31  DCGCAADLCCSRWGYCGTGDDYCGTGCQEGPCNPAPSTNNVSVADIVTQKFFNGIIDQAD 90

Query: 259 ADCAGKNFYSRDRFLEALNSYPQFGRVGTQDDSKREIAAFFAHVTHETGHFCYIEEIDGA 438
           A C GKNFYSR RFLEALNS+ QFGRVG+++DSKREIAAFFAHVTHETGHFCYIEEI+G+
Sbjct: 91  ASCEGKNFYSRARFLEALNSFSQFGRVGSEEDSKREIAAFFAHVTHETGHFCYIEEINGS 150

Query: 439 SKDYCDETNSQYPCVANKGYYGRGPLQLSWNYNYGPAGNSIVFDGLSAPETVATDPLVSF 618
           S+DYCDETN+QYPCVA KGYYGRGP+QLSWN+NYGPAG  I FDGL++PETVA+DP+VSF
Sbjct: 151 SRDYCDETNTQYPCVAGKGYYGRGPIQLSWNFNYGPAGEDIGFDGLNSPETVASDPVVSF 210

Query: 619 KTALWFWMNNAHSIITSGQGFGPTVRAINGG-ECDGRNPDTVRSRAEYYTNYSSQLGVSA 795
           KTALW+W+N   S+I   QGFG T+RAING  ECDG N  TV +R EYYT Y +QLGV+ 
Sbjct: 211 KTALWYWVNFVQSVI--DQGFGATIRAINGALECDGANQATVNARVEYYTEYCNQLGVTP 268

Query: 796 GDNLTC 813
           GDNLTC
Sbjct: 269 GDNLTC 274


>emb|CAN79254.1| hypothetical protein VITISV_009137 [Vitis vinifera]
          Length = 274

 Score =  400 bits (1029), Expect = e-109
 Identities = 181/246 (73%), Positives = 211/246 (85%), Gaps = 1/246 (0%)
 Frame = +1

Query: 79  NCGCAPNFCCSQYGYCGTDPDYCGPGCREGPCNAPPSTNDVTVADIVTPEFFNGIINQAG 258
           +CGCA + CCS++GYCGT  DYCG GC+EGPCN  PSTN+V+VADIVT +FFNGII+QA 
Sbjct: 31  DCGCAADLCCSRWGYCGTGDDYCGTGCQEGPCNPAPSTNNVSVADIVTQKFFNGIIDQAD 90

Query: 259 ADCAGKNFYSRDRFLEALNSYPQFGRVGTQDDSKREIAAFFAHVTHETGHFCYIEEIDGA 438
           A C GKNFYSR  FLEALNS+ QFGRVG+++DSKREIAAFFAHVTHETGHFCYIEEI+G+
Sbjct: 91  ASCEGKNFYSRAXFLEALNSFSQFGRVGSEEDSKREIAAFFAHVTHETGHFCYIEEINGS 150

Query: 439 SKDYCDETNSQYPCVANKGYYGRGPLQLSWNYNYGPAGNSIVFDGLSAPETVATDPLVSF 618
           S+DYCDETN+QYPCVA KGYYGRGP+QLSWN+NYGPAG  I FDGL++PETVA+DP+VSF
Sbjct: 151 SRDYCDETNTQYPCVAGKGYYGRGPIQLSWNFNYGPAGEDIGFDGLNSPETVASDPVVSF 210

Query: 619 KTALWFWMNNAHSIITSGQGFGPTVRAINGG-ECDGRNPDTVRSRAEYYTNYSSQLGVSA 795
           KTALW+W+N    +I  GQGFG T+RAING  ECDG N  TV +R EYYT Y +QLGV+ 
Sbjct: 211 KTALWYWVNFVQPVI--GQGFGATIRAINGALECDGANQATVNARVEYYTEYCNQLGVTP 268

Query: 796 GDNLTC 813
           GDNLTC
Sbjct: 269 GDNLTC 274


>ref|XP_002326040.1| predicted protein [Populus trichocarpa] gi|222862915|gb|EEF00422.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  395 bits (1015), Expect = e-108
 Identities = 179/247 (72%), Positives = 206/247 (83%), Gaps = 2/247 (0%)
 Frame = +1

Query: 79  NCGCAPNFCCSQYGYCGTDPDYCGPGCREGPCN-APPSTNDVTVADIVTPEFFNGIINQA 255
           NCGCAPN CCSQ+G+CGT   YCG GCREGPC  + PS NDVTVAD+VTPEFFNGIINQA
Sbjct: 26  NCGCAPNLCCSQFGFCGTGDAYCGQGCREGPCTPSTPSNNDVTVADVVTPEFFNGIINQA 85

Query: 256 GADCAGKNFYSRDRFLEALNSYPQFGRVGTQDDSKREIAAFFAHVTHETGHFCYIEEIDG 435
           G DCAGK+FY+RD FL ALNSY QFG++G+ DDSKREIAAFFAHVTHETGHFCYIEEI+G
Sbjct: 86  GGDCAGKSFYTRDAFLSALNSYSQFGKIGSNDDSKREIAAFFAHVTHETGHFCYIEEING 145

Query: 436 ASKDYCDETNSQYPCVANKGYYGRGPLQLSWNYNYGPAGNSIVFDGLSAPETVATDPLVS 615
           AS DYCDETN+QYPC  NK Y+GRGPLQL+WNYNYG AG +  FDGL++PETVA DP+VS
Sbjct: 146 ASHDYCDETNTQYPCNPNKNYFGRGPLQLTWNYNYGAAGGANNFDGLNSPETVANDPVVS 205

Query: 616 FKTALWFWMNNAHSIITSGQGFGPTVRAINGG-ECDGRNPDTVRSRAEYYTNYSSQLGVS 792
           FKTALWFWM N   ++T  QGFG T+RAING  EC+G N   V++R  YYT+Y +Q GV+
Sbjct: 206 FKTALWFWMTNVRPVVT--QGFGATIRAINGAVECNGGNSGAVQARIGYYTDYCNQFGVA 263

Query: 793 AGDNLTC 813
            GDNL+C
Sbjct: 264 PGDNLSC 270


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