BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005199
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625191.1| DNA-directed RNA polymerases I, II, and III ...   123   7e-35
ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|2...   123   7e-35
ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|2...   123   7e-35
ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, I...   123   7e-35
ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycin...   123   7e-35

>ref|XP_003625191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC2
           [Medicago truncatula] gi|124360124|gb|ABN08140.1|
           DNA-directed RNA polymerase, 14 to 18 kDa subunit
           [Medicago truncatula] gi|355500206|gb|AES81409.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 [Medicago truncatula] gi|388508874|gb|AFK42503.1|
           unknown [Medicago truncatula]
           gi|388517849|gb|AFK46986.1| unknown [Medicago
           truncatula]
          Length = 145

 Score =  123 bits (309), Expect(2) = 7e-35
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -3

Query: 693 KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 514
           KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW
Sbjct: 68  KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 127



 Score = 50.1 bits (118), Expect(2) = 7e-35
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -1

Query: 449 EDWGVDELIVEDSWKRQVGGD 387
           EDWGVDELIVEDSWKRQVGGD
Sbjct: 125 EDWGVDELIVEDSWKRQVGGD 145


>ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|222869446|gb|EEF06577.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  123 bits (309), Expect(2) = 7e-35
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -3

Query: 693 KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 514
           KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW
Sbjct: 66  KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 125



 Score = 50.1 bits (118), Expect(2) = 7e-35
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -1

Query: 449 EDWGVDELIVEDSWKRQVGGD 387
           EDWGVDELIVEDSWKRQVGGD
Sbjct: 123 EDWGVDELIVEDSWKRQVGGD 143


>ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|222858913|gb|EEE96460.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  123 bits (309), Expect(2) = 7e-35
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -3

Query: 693 KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 514
           KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW
Sbjct: 66  KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 125



 Score = 50.1 bits (118), Expect(2) = 7e-35
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -1

Query: 449 EDWGVDELIVEDSWKRQVGGD 387
           EDWGVDELIVEDSWKRQVGGD
Sbjct: 123 EDWGVDELIVEDSWKRQVGGD 143


>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Glycine max]
          Length = 142

 Score =  123 bits (309), Expect(2) = 7e-35
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -3

Query: 693 KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 514
           KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW
Sbjct: 65  KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 124



 Score = 50.1 bits (118), Expect(2) = 7e-35
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -1

Query: 449 EDWGVDELIVEDSWKRQVGGD 387
           EDWGVDELIVEDSWKRQVGGD
Sbjct: 122 EDWGVDELIVEDSWKRQVGGD 142


>ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycine max]
           gi|255626491|gb|ACU13590.1| unknown [Glycine max]
          Length = 142

 Score =  123 bits (309), Expect(2) = 7e-35
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -3

Query: 693 KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 514
           KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW
Sbjct: 65  KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 124



 Score = 50.1 bits (118), Expect(2) = 7e-35
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -1

Query: 449 EDWGVDELIVEDSWKRQVGGD 387
           EDWGVDELIVEDSWKRQVGGD
Sbjct: 122 EDWGVDELIVEDSWKRQVGGD 142