BLASTX nr result
ID: Coptis25_contig00005194
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00005194 (2601 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|2... 67 2e-08 gb|ABK93072.1| unknown [Populus trichocarpa] 67 2e-08 gb|ABK92865.1| unknown [Populus trichocarpa] 67 2e-08 ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15... 61 1e-06 emb|CAN75341.1| hypothetical protein VITISV_034142 [Vitis vinifera] 59 5e-06 >ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|222875186|gb|EEF12317.1| predicted protein [Populus trichocarpa] Length = 168 Score = 67.0 bits (162), Expect = 2e-08 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%) Frame = -1 Query: 444 SEENLSHWEMRARFQSINYWIHDSLSSHSDAFLRSLH*LPVANVLHNP-SGDDLARAS 274 SE+N + WE+ A+F++I YW HDSL S DAF+RSLH L VA LH P + +DLA AS Sbjct: 104 SEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSVAEALHKPAAAEDLASAS 161 >gb|ABK93072.1| unknown [Populus trichocarpa] Length = 168 Score = 67.0 bits (162), Expect = 2e-08 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%) Frame = -1 Query: 444 SEENLSHWEMRARFQSINYWIHDSLSSHSDAFLRSLH*LPVANVLHNP-SGDDLARAS 274 SE+N + WE+ A+F++I YW HDSL S DAF+RSLH L VA LH P + +DLA AS Sbjct: 104 SEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSVAEALHKPAAAEDLASAS 161 >gb|ABK92865.1| unknown [Populus trichocarpa] Length = 168 Score = 67.0 bits (162), Expect = 2e-08 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%) Frame = -1 Query: 444 SEENLSHWEMRARFQSINYWIHDSLSSHSDAFLRSLH*LPVANVLHNP-SGDDLARAS 274 SE+N + WE+ A+F++I YW HDSL S DAF+RSLH L VA LH P + +DLA AS Sbjct: 104 SEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSVAEALHKPAAAEDLASAS 161 >ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15c [Vitis vinifera] gi|297737975|emb|CBI27176.3| unnamed protein product [Vitis vinifera] Length = 174 Score = 61.2 bits (147), Expect = 1e-06 Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%) Frame = -1 Query: 447 TSEENLSHWEMRARFQSINYWIHDSLSSHSDAFLRSLH*LPVANVLHNPS-GDDLARAS 274 TSE N++ WE A+FQ+I +W HD+L S D+++RS H L V+ LH P+ +DL AS Sbjct: 104 TSEGNMNRWETNAKFQAITFWNHDNLPSQDDSYVRSFHWLAVSKALHKPAMAEDLRVAS 162 >emb|CAN75341.1| hypothetical protein VITISV_034142 [Vitis vinifera] Length = 403 Score = 59.3 bits (142), Expect = 5e-06 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%) Frame = -1 Query: 447 TSEENLSHWEMRARFQSINYWIHDSLSSHSDAFLRSLH*LPVANVLHNPS-GDDLARAS 274 TSE N++ WE A+FQ+ +W HD+L S D+++RS H L V+ LH P+ +DL AS Sbjct: 101 TSEGNMNRWETNAKFQAXTFWNHDNLPSQDDSYVRSFHWLAVSKALHKPAMAEDLRVAS 159