BLASTX nr result

ID: Coptis25_contig00005194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005194
         (2601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-08
gb|ABK93072.1| unknown [Populus trichocarpa]                           67   2e-08
gb|ABK92865.1| unknown [Populus trichocarpa]                           67   2e-08
ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15...    61   1e-06
emb|CAN75341.1| hypothetical protein VITISV_034142 [Vitis vinifera]    59   5e-06

>ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|222875186|gb|EEF12317.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -1

Query: 444 SEENLSHWEMRARFQSINYWIHDSLSSHSDAFLRSLH*LPVANVLHNP-SGDDLARAS 274
           SE+N + WE+ A+F++I YW HDSL S  DAF+RSLH L VA  LH P + +DLA AS
Sbjct: 104 SEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSVAEALHKPAAAEDLASAS 161


>gb|ABK93072.1| unknown [Populus trichocarpa]
          Length = 168

 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -1

Query: 444 SEENLSHWEMRARFQSINYWIHDSLSSHSDAFLRSLH*LPVANVLHNP-SGDDLARAS 274
           SE+N + WE+ A+F++I YW HDSL S  DAF+RSLH L VA  LH P + +DLA AS
Sbjct: 104 SEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSVAEALHKPAAAEDLASAS 161


>gb|ABK92865.1| unknown [Populus trichocarpa]
          Length = 168

 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -1

Query: 444 SEENLSHWEMRARFQSINYWIHDSLSSHSDAFLRSLH*LPVANVLHNP-SGDDLARAS 274
           SE+N + WE+ A+F++I YW HDSL S  DAF+RSLH L VA  LH P + +DLA AS
Sbjct: 104 SEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSVAEALHKPAAAEDLASAS 161


>ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15c [Vitis vinifera]
           gi|297737975|emb|CBI27176.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = -1

Query: 447 TSEENLSHWEMRARFQSINYWIHDSLSSHSDAFLRSLH*LPVANVLHNPS-GDDLARAS 274
           TSE N++ WE  A+FQ+I +W HD+L S  D+++RS H L V+  LH P+  +DL  AS
Sbjct: 104 TSEGNMNRWETNAKFQAITFWNHDNLPSQDDSYVRSFHWLAVSKALHKPAMAEDLRVAS 162


>emb|CAN75341.1| hypothetical protein VITISV_034142 [Vitis vinifera]
          Length = 403

 Score = 59.3 bits (142), Expect = 5e-06
 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = -1

Query: 447 TSEENLSHWEMRARFQSINYWIHDSLSSHSDAFLRSLH*LPVANVLHNPS-GDDLARAS 274
           TSE N++ WE  A+FQ+  +W HD+L S  D+++RS H L V+  LH P+  +DL  AS
Sbjct: 101 TSEGNMNRWETNAKFQAXTFWNHDNLPSQDDSYVRSFHWLAVSKALHKPAMAEDLRVAS 159


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